Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d052948_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:4:205895319:205899917:-1 gene:Zm00001d052948 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative TCP-1/cpn60 chaperonin family protein
Sequence	ATGGTGGGGCTCGGCTCGATGGCGGGCTATGGGATCCAGTCGATGCTCAAGGAAGGCCAC CGCCACCTCTCCGGGCTCGAGGAGGCCGTGCTCAAGAACATCGACGCCTGCCGCGAGCTC TCCGCCATCACGCGCACATCCCTGGGCCCCAACGGAATGAACAAGATGGTTATCAATCAC TTGGACAAGCTGTTTGTCACAAACGATGCTGCCACCATCGTGAATGAGCTTGAGGTTCAG CACCCGGCTGCTAAAATCCTGGTACTGGCTGCCAAGGCTCAACAGGAGGAGATTGGGGAT GGAGCCAATCTCACCATATCGTTTGCTGGTGAACTGCTTGAGAAGGCTGAGGAGCTCATC AGGATGGGCTTGCATCCGAGTGAGATCATCATTGGCTACACCAAAGCCATCAACAAGACA ATTGAAATTTTAGAGGATCTTGTTGAGAAAGGCTCAGAGAACATGGACGTAAGAAACAAG GAGGATGTTGTGTTGAGGATGAGATCTGCTGTCGCAAGCAAGCAGTTTGGCCAGGAGGAT ATGCTGTGCCCTCTTGTGGCTGATGCCTGCATTCAAGTTTGCCCCAAAAATCCTGCAAAC TTTAATGTTGACAATGTTAGAGTGGCTAAGCTACTTGGAGGTGGTTTGCACAATTCTTCT GTGGTCCGTGGGATGGTTCTGAAAAATGATGCTGTTGGTAGCATCAAAAGGGCGGAGAAG GCAAAGATTGTCGTATTTGCTGGTGGTGTCGACACCTCGGCAACTGAAACAAAGGGAACC GTGTTGATCCATTCCGCTGAGCAGCTAGAAAATTATGCTAAGACTGAGGAAGCTAAGGTG GAGGAGCTTATCAAAGCTGTCGCTGACTCTGGTGCCAAGGTTATTGTCAGTGGAGCTGCA GTGGGTGACATGGCACTTCATTTCTGTGAACGTTATAAGCTGATGGTTCTGAAAATCAGC TCGAAGTTTGAACTAAGAAGGTTCTGCCGTACTACTGGGGCTGTTGCAATTTTGAAACTT AGCCAACCCAATGCGGACGAACTAGGATACGCAGATTCTGTTTCTGTAGAAGAAATTGGT GGTACTCGGGTTACTGTCGTCAAGAACGAAGATGGTGGAAATTCAGTGGCTACTGTTGTC CTGAGAGGCAGTACTGACAGTATACTAGATGATCTTGAAAGAGCTGTTGATGATGGCGTC AATACATACAGGTCAATGTGCAGGGACAGTAGGATAATTCCTGGTGCTGCTGCAACAGAA GTTGAGCTGGCAAAGAGATTGAAGGAGTTCTCTTTGAAGGAAACAGGGTTGGACCAGTAT GCCATTGCGAAATTTGCTGAAAGCTTTGAAATGGTTCCAAGAACCCTGGCAGAAAATGCT GGACTTAGCGCAATGGAGATAATATCCTCTCTTTATGCTGAGCATGCTAGTGGCAATGCG AAAGTTGGCATTGATCTGGAGGAAGGCGCCTGCAAGGACATCTCGACTTTAAAAATATGG GACCTCTATGTCACAAAGTTTTTTGCCCTAAAATACTCTGCCGATGCTGCTTGCACGGTG CTGCGGGTTGACCAGATCATTATGGCAAAGCCGGCAGGAGGTCCAAGAAGAGATGCCCAG CCTGGTGGCGGGATGGACGAGGATTAG

Peptide Sequence

PEP ID	Zm00001d052948_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:4:205895319:205899917:-1 gene:Zm00001d052948 transcript:Zm00001d052948_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative TCP-1/cpn60 chaperonin family protein
Sequence	MVGLGSMAGYGIQSMLKEGHRHLSGLEEAVLKNIDACRELSAITRTSLGPNGMNKMVINH LDKLFVTNDAATIVNELEVQHPAAKILVLAAKAQQEEIGDGANLTISFAGELLEKAEELI RMGLHPSEIIIGYTKAINKTIEILEDLVEKGSENMDVRNKEDVVLRMRSAVASKQFGQED MLCPLVADACIQVCPKNPANFNVDNVRVAKLLGGGLHNSSVVRGMVLKNDAVGSIKRAEK AKIVVFAGGVDTSATETKGTVLIHSAEQLENYAKTEEAKVEELIKAVADSGAKVIVSGAA VGDMALHFCERYKLMVLKISSKFELRRFCRTTGAVAILKLSQPNADELGYADSVSVEEIG GTRVTVVKNEDGGNSVATVVLRGSTDSILDDLERAVDDGVNTYRSMCRDSRIIPGAAATE VELAKRLKEFSLKETGLDQYAIAKFAESFEMVPRTLAENAGLSAMEIISSLYAEHASGNA KVGIDLEEGACKDISTLKIWDLYVTKFFALKYSADAACTVLRVDQIIMAKPAGGPRRDAQ PGGGMDED

Transcript Sequence

Transcript ID	Zm00001d052948_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:205895319:205899917:-1 gene:Zm00001d052948 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative TCP-1/cpn60 chaperonin family protein
Sequence	CTAGAACACCTTGGTGGCCTCCGCGTCTCGCCGCCTCCCCGGACTCCGCATCCAGCCCCG GCACTCGCACTCCCAAAGCAGCGGACACTAGTAGGGTTTAAACTTTCCCCCCGATCCGCC TCGCCTCCGGCGCTGTCGCCTGCCGCCAGACCAACGCCCCCACACCCAGCCGGAGACGAC GATGGTGGGGCTCGGCTCGATGGCGGGCTATGGGATCCAGTCGATGCTCAAGGAAGGCCA CCGCCACCTCTCCGGGCTCGAGGAGGCCGTGCTCAAGAACATCGACGCCTGCCGCGAGCT CTCCGCCATCACGCGCACATCCCTGGGCCCCAACGGAATGAACAAGATGGTTATCAATCA CTTGGACAAGCTGTTTGTCACAAACGATGCTGCCACCATCGTGAATGAGCTTGAGGTTCA GCACCCGGCTGCTAAAATCCTGGTACTGGCTGCCAAGGCTCAACAGGAGGAGATTGGGGA TGGAGCCAATCTCACCATATCGTTTGCTGGTGAACTGCTTGAGAAGGCTGAGGAGCTCAT CAGGATGGGCTTGCATCCGAGTGAGATCATCATTGGCTACACCAAAGCCATCAACAAGAC AATTGAAATTTTAGAGGATCTTGTTGAGAAAGGCTCAGAGAACATGGACGTAAGAAACAA GGAGGATGTTGTGTTGAGGATGAGATCTGCTGTCGCAAGCAAGCAGTTTGGCCAGGAGGA TATGCTGTGCCCTCTTGTGGCTGATGCCTGCATTCAAGTTTGCCCCAAAAATCCTGCAAA CTTTAATGTTGACAATGTTAGAGTGGCTAAGCTACTTGGAGGTGGTTTGCACAATTCTTC TGTGGTCCGTGGGATGGTTCTGAAAAATGATGCTGTTGGTAGCATCAAAAGGGCGGAGAA GGCAAAGATTGTCGTATTTGCTGGTGGTGTCGACACCTCGGCAACTGAAACAAAGGGAAC CGTGTTGATCCATTCCGCTGAGCAGCTAGAAAATTATGCTAAGACTGAGGAAGCTAAGGT GGAGGAGCTTATCAAAGCTGTCGCTGACTCTGGTGCCAAGGTTATTGTCAGTGGAGCTGC AGTGGGTGACATGGCACTTCATTTCTGTGAACGTTATAAGCTGATGGTTCTGAAAATCAG CTCGAAGTTTGAACTAAGAAGGTTCTGCCGTACTACTGGGGCTGTTGCAATTTTGAAACT TAGCCAACCCAATGCGGACGAACTAGGATACGCAGATTCTGTTTCTGTAGAAGAAATTGG TGGTACTCGGGTTACTGTCGTCAAGAACGAAGATGGTGGAAATTCAGTGGCTACTGTTGT CCTGAGAGGCAGTACTGACAGTATACTAGATGATCTTGAAAGAGCTGTTGATGATGGCGT CAATACATACAGGTCAATGTGCAGGGACAGTAGGATAATTCCTGGTGCTGCTGCAACAGA AGTTGAGCTGGCAAAGAGATTGAAGGAGTTCTCTTTGAAGGAAACAGGGTTGGACCAGTA TGCCATTGCGAAATTTGCTGAAAGCTTTGAAATGGTTCCAAGAACCCTGGCAGAAAATGC TGGACTTAGCGCAATGGAGATAATATCCTCTCTTTATGCTGAGCATGCTAGTGGCAATGC GAAAGTTGGCATTGATCTGGAGGAAGGCGCCTGCAAGGACATCTCGACTTTAAAAATATG GGACCTCTATGTCACAAAGTTTTTTGCCCTAAAATACTCTGCCGATGCTGCTTGCACGGT GCTGCGGGTTGACCAGATCATTATGGCAAAGCCGGCAGGAGGTCCAAGAAGAGATGCCCA GCCTGGTGGCGGGATGGACGAGGATTAGTTTGATTATAGTTGTTTTCTTTGTATCACGTA TGTGAGGTTTCAGAGCAGAGATCATACTTTATCTTGGCTTTTGGTTCTGTAGAAGGTTTG GGTGCCTGGAGTTCACTTTTGGAAGGTCTGCACGGTTGCGCGGATATCACATAGGCAATT TGTATGTTTTTTCCTGGTGTATTGCGGTGCGGATGTATCAAATGATTCATTACAGGGGCC GTTCCGTCAGTTCATCACACCAACTGAGCTCTTGTAATGTCTCGTTTGGTTGGGTTGAGT ACTAAAGATTAGTCATTTCATTTTAGTCCTTAAATTGCCTTAAATTGCCAAGCGGAGAGA CTAAAATAAGGACTAAACTGTTTGTCTTAGTCTGGAGTAACTAAAAGAGACTAAACAATA TT