Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d052944_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:4:205745035:205748279:-1 gene:Zm00001d052944 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:calcium/calmodulin dependent protein kinase1 description: calcium/calmodulin dependent protein kinase1
Sequence	ATGTCCAAGACCGAGAGCAGGAAGCTGTCGGACGACTATGAGGTCGCGGAGGTCCTCGGC CGAGGCGGATTCTCGATCGTGAGGCGGGGAGTGAGCAAGTCAGAGGGGAAGGCGGCTCAA CAGGTCGCCATAAAGACCCTGCGAAGGCTGGGCCCGGCCACCACGACCGGCGGGAGCACG CTGCCGCCGCAGCAAGGCTCAAATAAGGGCGGCGGCCTGGTTCCGACGTGGAAGCAGGTG TCGTCCATCTCCGACGCGCTGCTCACCAACGAGATCCTCGTGATGCGGCGGATCGTGGAG GCCGTGGCGCCGCACCCCAACGTCATCGCGCTGCACGACGTGTACGAGGACGCGCGCGGC GTGCACCTGGTCCTGGAGCTCTGCTCGGGCGGCGAGCTGTTCGACCGGATCGTGGGGCGC GACCGCCACTACTCGGAGTTCGACGCGGCGGGCGTCGTCCGCCAGATCGCGCGCGGGCTG CAGGCGCTCCACGGCGCGGGCGTCGTGCACCGGGACCTCAAGCCCGAGAACTGCCTCTTC GCCGACAGGGGCGAGGCCTCCACGCTCAAGATCATGGATTTCGGCCTCAGCTCCGTCGAG GACTTCAGCGACCCCGTCGTCACCCTGTTCGGCTCGATCGACTACGTCTCGCCGGAGGCC CTCTCGAGGCAGGATGTCTCGGCTGCCAGCGACATGTGGTCTGTTGGGGTGATTCTGTAT ATCCTCTTGTCCGGATGCCCGCCGTTCCATGCACCAACTAATCGAGAGAAGCAGCAGAGG ATACTGCAGGGAGAGTTCAGTTTCCAGGACCATACATGGAAGACAATCTCTTCATCAGCC AAAGAACTGATCTCCAGTCTTCTCTCTGTTGAGCCTTACAAGAGGCCAACAGCAAGTGAC CTGCTGGGGCATCCTTGGGTGATAGGGGACTGCGCGAAGCAGGACCTCATGGACGCGGAG GTCGTGACGAAGCTGCAGAGGTTCAACGCCAGAAGGAAGCTGCGGGCGGCGGCGATCGCC AGCGTGCTCAGCAGCAAGGTGGCGCTGCGGACGAAGCGGCTGCGGAACCTGCTGGGACGG CATGACCTGAGCTCCGAGGAGCTCGACAACCTGCGGGCTCACTTTGCACGGATATGCGCC GACGGCGAGAACGCGACGCTGGCGGAGTTCGAGCAGGTGCTGAGGGCGATGAGGCTGGAG GCGCTGGTCCCGCTGGCGCCGCGCGTGTTCGACCTGTTCGACAACAACCGCGACGGCACG GTGGACATGAGGGAGATCCTGTGCGGGCTGTCCAGCCTCCGCAACTCCCGCGGCGACGAC GCGCTCCGGCTCTGCTTCCAGATGTACGACGCCGACCGCTCCGGGTGCATAAGCAAGGAC GAGCTGGCGTCGATGCTGCGAGCGCTGCCCGAGGAGTGCCTTCCGGGCGACATCACGGAG CCCGGGAAGCTGGACGAGGTGTTCGACGAGATGGACGCCAACGGCGACGGCAAGGTGAGC TTCGAGGAGTTCAAGGCGGCCATGCAGAAGGACAGCGCCCTCCAGGACGTCGTCCTCTCG TCCCTCCGGCCGCCGCCGCCGCCATAG

Peptide Sequence

PEP ID	Zm00001d052944_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:4:205745035:205748279:-1 gene:Zm00001d052944 transcript:Zm00001d052944_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:calcium/calmodulin dependent protein kinase1 description: calcium/calmodulin dependent protein kinase1
Sequence	MSKTESRKLSDDYEVAEVLGRGGFSIVRRGVSKSEGKAAQQVAIKTLRRLGPATTTGGST LPPQQGSNKGGGLVPTWKQVSSISDALLTNEILVMRRIVEAVAPHPNVIALHDVYEDARG VHLVLELCSGGELFDRIVGRDRHYSEFDAAGVVRQIARGLQALHGAGVVHRDLKPENCLF ADRGEASTLKIMDFGLSSVEDFSDPVVTLFGSIDYVSPEALSRQDVSAASDMWSVGVILY ILLSGCPPFHAPTNREKQQRILQGEFSFQDHTWKTISSSAKELISSLLSVEPYKRPTASD LLGHPWVIGDCAKQDLMDAEVVTKLQRFNARRKLRAAAIASVLSSKVALRTKRLRNLLGR HDLSSEELDNLRAHFARICADGENATLAEFEQVLRAMRLEALVPLAPRVFDLFDNNRDGT VDMREILCGLSSLRNSRGDDALRLCFQMYDADRSGCISKDELASMLRALPEECLPGDITE PGKLDEVFDEMDANGDGKVSFEEFKAAMQKDSALQDVVLSSLRPPPPP

Transcript Sequence

Transcript ID	Zm00001d052944_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:205745035:205748279:-1 gene:Zm00001d052944 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:calcium/calmodulin dependent protein kinase1 description: calcium/calmodulin dependent protein kinase1
Sequence	GTTCCCAATCCTCACACTGATTGTGGCCTTCCAGTTCTTGTGGTCTCTCAACCAGCATCT GATACCCAATTCCTCGCACAAACCTGCCACACGCAATGTCCAAGACCGAGAGCAGGAAGC TGTCGGACGACTATGAGGTCGCGGAGGTCCTCGGCCGAGGCGGATTCTCGATCGTGAGGC GGGGAGTGAGCAAGTCAGAGGGGAAGGCGGCTCAACAGGTCGCCATAAAGACCCTGCGAA GGCTGGGCCCGGCCACCACGACCGGCGGGAGCACGCTGCCGCCGCAGCAAGGCTCAAATA AGGGCGGCGGCCTGGTTCCGACGTGGAAGCAGGTGTCGTCCATCTCCGACGCGCTGCTCA CCAACGAGATCCTCGTGATGCGGCGGATCGTGGAGGCCGTGGCGCCGCACCCCAACGTCA TCGCGCTGCACGACGTGTACGAGGACGCGCGCGGCGTGCACCTGGTCCTGGAGCTCTGCT CGGGCGGCGAGCTGTTCGACCGGATCGTGGGGCGCGACCGCCACTACTCGGAGTTCGACG CGGCGGGCGTCGTCCGCCAGATCGCGCGCGGGCTGCAGGCGCTCCACGGCGCGGGCGTCG TGCACCGGGACCTCAAGCCCGAGAACTGCCTCTTCGCCGACAGGGGCGAGGCCTCCACGC TCAAGATCATGGATTTCGGCCTCAGCTCCGTCGAGGACTTCAGCGACCCCGTCGTCACCC TGTTCGGCTCGATCGACTACGTCTCGCCGGAGGCCCTCTCGAGGCAGGATGTCTCGGCTG CCAGCGACATGTGGTCTGTTGGGGTGATTCTGTATATCCTCTTGTCCGGATGCCCGCCGT TCCATGCACCAACTAATCGAGAGAAGCAGCAGAGGATACTGCAGGGAGAGTTCAGTTTCC AGGACCATACATGGAAGACAATCTCTTCATCAGCCAAAGAACTGATCTCCAGTCTTCTCT CTGTTGAGCCTTACAAGAGGCCAACAGCAAGTGACCTGCTGGGGCATCCTTGGGTGATAG GGGACTGCGCGAAGCAGGACCTCATGGACGCGGAGGTCGTGACGAAGCTGCAGAGGTTCA ACGCCAGAAGGAAGCTGCGGGCGGCGGCGATCGCCAGCGTGCTCAGCAGCAAGGTGGCGC TGCGGACGAAGCGGCTGCGGAACCTGCTGGGACGGCATGACCTGAGCTCCGAGGAGCTCG ACAACCTGCGGGCTCACTTTGCACGGATATGCGCCGACGGCGAGAACGCGACGCTGGCGG AGTTCGAGCAGGTGCTGAGGGCGATGAGGCTGGAGGCGCTGGTCCCGCTGGCGCCGCGCG TGTTCGACCTGTTCGACAACAACCGCGACGGCACGGTGGACATGAGGGAGATCCTGTGCG GGCTGTCCAGCCTCCGCAACTCCCGCGGCGACGACGCGCTCCGGCTCTGCTTCCAGATGT ACGACGCCGACCGCTCCGGGTGCATAAGCAAGGACGAGCTGGCGTCGATGCTGCGAGCGC TGCCCGAGGAGTGCCTTCCGGGCGACATCACGGAGCCCGGGAAGCTGGACGAGGTGTTCG ACGAGATGGACGCCAACGGCGACGGCAAGGTGAGCTTCGAGGAGTTCAAGGCGGCCATGC AGAAGGACAGCGCCCTCCAGGACGTCGTCCTCTCGTCCCTCCGGCCGCCGCCGCCGCCAT AGCTAGACGGGGAGAGAGATTCCAACTCGTTCAACTTCATTCCCACGAGAACGCACCATT GATTACAGTACCGTTCGAATCATTTAATCAGTCTCCGGCATGTGCCGTTGTCCGATCCGG CCGGCTAGCTGTTGGAAACTACGGGTCGTGGGAAAGCCTCGATGGATCCTGCTAGATATG GCTGTGCTGTTATGTGTTTCTGGATCCTGCTAGATTAGCTGGCTGTGTTGTTATGGGTGG CGGCCACAGATGTTTTTTTTACATATGGCTAGTTTAGAAGTTACAAAATCGAAAGGGGTT CGAGAGGCTAAAATCACTTCCTTATTCAACTTTGAATGGAGGAGATTTTAGTCCCTCCAA TTCACTTCGGTTTTTGTACTCCTAAACTAGCTTTTAAGGTAGAAAAATAAACGTGTCAAG AGTGGTGAAATCACATGTGGCAAAAAAGACACGACGCTGTCAAATTTTGAAAGGATAAAA AAGGATAACGGTAAGCTATTTTGTAT