Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d052930_T006
CDS Infomation	cds chromosome:B73_RefGen_v4:4:205243656:205248401:-1 gene:Zm00001d052930 gene_biotype:protein_coding transcript_biotype:protein_coding description:E3 ubiquitin-protein ligase RHF2A
Sequence	ATGGCATCTGTAACTGATGAGACAGCTAAGATTGAGGGTTTGACATCTGCTGCAGCCTTT GTGGAGGGTGGCATTCAGGACGCATGTGATGATGCATGCAGCATTTGCCTTGAGGCTTTC TGTGAGAGTGACCCTTCTGCATTGACTGGCTGCAAACATGAGTTCCATCTCCAATGCATT CTTGAATGGTGCCAGAGAAGTTCACAGTGCCCAATGTGTTGGCAGCCTATTACTATGAAG GATCCTACCAGTCAGGAGCTGCTTGAGGCAGTAGAGCGTGAGAGGAATATAAGAACTAAT CAAACTCGGAACACAACTATATTTCATCATCCTGCTCTTGGGGATTTTGAGCTGCAGCAT CTGCCTGTTGGTAATGATGCTGAGCTTGAAGAGCGTATACTGCAGCATCTAGCTGCTGCT GCTGCAATGGGAAGGGCACACCATCTTGGAAGAAGGGAGGGGCACAGGGGACGATCTGGC TCTCATGGTCGTCCACATTTCCTAGTTTTCTCTACACAACCAAATTCACCTTCTGCTGGC ACAATCTCTTCATCTTCTGCTCATATGGAGGGAGAAAATGATTCAAATCCTGCCACACCT AGAGCTAGCGAGTCATCTCCACGAGCTATTCGCATTGGAGAAGTGGGAAACCAAAGTCCT GGGATGCTTACCTACGATGCTGAACAGGATGCTGTCGTTTCTTCCGGAAATAGCACTCCT GTATCGAGTCCTAGGTTTTTTAACAGGAGACACTCCACTGGACAGTCAACTCCAGACAGG GCTGGGCCATCGGATATTCAGTCTTTCTCAGACTCCCTGAAGTCCCGCTTAAATGCCGTC TCTATGAAGTACAAAGAATCTATTACAAAGAGTACTCGAGGGTGGAAGGAGAGATTGTTT TCACGTAATTCATCCGTGGCGGATCTTGGTTCTGAAGTGAGAAGAGAAGTTAATGCTGGA ATTGCGTCCGTATCACGGATGATGGAGCGTCTGGAAACTAGAGGAAATAGCAGAACAAGT GATAGCCCGGCAGCATCCACTTCTGAAGTTCCCTCTGCTACAGAATCAAGCAATGAAAGG GTTACAGAGAGCAACTCTGCTGCTGCTGCTGCTGGTGGTGGTACTACCACTACGGGTACC AGCGCTAGCAACGCCTCCGCCCCTTGTGTTGCGACATCCGGTTCAAATTAG

Peptide Sequence

PEP ID	Zm00001d052930_P006
PEP Infomation	pep chromosome:B73_RefGen_v4:4:205243656:205248401:-1 gene:Zm00001d052930 transcript:Zm00001d052930_T006 gene_biotype:protein_coding transcript_biotype:protein_coding description:E3 ubiquitin-protein ligase RHF2A
Sequence	MASVTDETAKIEGLTSAAAFVEGGIQDACDDACSICLEAFCESDPSALTGCKHEFHLQCI LEWCQRSSQCPMCWQPITMKDPTSQELLEAVERERNIRTNQTRNTTIFHHPALGDFELQH LPVGNDAELEERILQHLAAAAAMGRAHHLGRREGHRGRSGSHGRPHFLVFSTQPNSPSAG TISSSSAHMEGENDSNPATPRASESSPRAIRIGEVGNQSPGMLTYDAEQDAVVSSGNSTP VSSPRFFNRRHSTGQSTPDRAGPSDIQSFSDSLKSRLNAVSMKYKESITKSTRGWKERLF SRNSSVADLGSEVRREVNAGIASVSRMMERLETRGNSRTSDSPAASTSEVPSATESSNER VTESNSAAAAAGGGTTTTGTSASNASAPCVATSGSN

Transcript Sequence

Transcript ID	Zm00001d052930_T006
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:205243656:205248401:-1 gene:Zm00001d052930 gene_biotype:protein_coding transcript_biotype:protein_coding description:E3 ubiquitin-protein ligase RHF2A
Sequence	ACCAACTACTCCCCCACCGAACCGAGCACGGCCACGGGGTATCGAGTCGTGACCCACTGG CGGGTGGGCCGAAATCATCGTCGGGCCCACGCGTCGGTGTGCGTGGAGCTGGTGAGCTCG TGAGGCAGCGCGCGGAGGAGTGCGGTGGTAGTGGACAGAGATAGGGGCGGCGGGGCCCAC CCTGCTGGGTCGAGCGGGCGGTGGGGGCCGAGTGGGGACGAGGCACGCGTCTCGCTCGTC TCACCCTTTTTCGTCTCTCCTCTGCCTTTCCCCATCGTCTCTCCGTCTACACCTCATCAT AATCACAGATTCACAGAGCGCTAGGGAGGAGAGAGGGCTAGGGTTTCGTGCTCCCTCACG CAACGAATCCGAGCCGGATCGGGGGGTGCGCGGAGTCACCGGCGGCCCGGCGTTGCCTGG TAAGGCCAGATCCCCCCTCTCTGACCGCGGCGTGGTCGGGTCCCACGGCAGCGGCCATTC GGAGGGCGGAGAGTTCGGATCGTTTCGATTGCAGTTGGGTTTGTTCCGGGAAGCGGGTCG TCTGGGGTTTGGTTCCCGGAGAATTCGGGTCCTTGTGGTAGGTGCCTGCTCGTCCTGGAC GATTTGGGCGGTCGTCGTCGTCGTCGCAGTGAGCTGCTTGGGGGTTGTGTTTGATGCGGT CGGATTTTGGGGTTCTGGACGCGGGAATTCAGAACGAATTCGGATATTAGCTCCATACGG TAGCCTTATGTCTTACTCTTCTGTTTCGAGGAAGATAGTTTTACGGTCATCTCATTGGTT TGGCCCTTTTGCATACTTTAGATTGGGATTCGGGTGAGGACCTCTGTGGAATTGAGCTGA TTATCTTGTGCCTTTCTTAAGAGATGTGATCATTGATGTGTTGGGGTTTTCGGTCCAATT TACCGAGCTCAGAGAATGTGCAGTACTCAGCCGGGTCAATTCTGGCTCACTGAGCCGCTG GTGATCCAAAATTGTTCCTCAGCATCGAGTGTAACTGGTTATTGTTACGTGATCGGGATG GTCTGTCACTTTGATTTGTGGTGAATGGGTTGTCATGTGTGGTTTCCGTGCTTCGGGCTG TCTCGCAGAGGAGTGTGTGGTGTATGGAATAGAGCCCTGATGCGTTCAGCATTTGGCAAA ATTCGTAAATATGCATACCAATAAATCGTCGGTATTGCTACTATTTTATTGCCTGTTACA CTTTAAGACTTGAGATGCATTTGCTCCATTTTGTGTAATGTCTAATGATGATTGCTGGTG ATAGCAGGGGATATATCAGTACCAGTGATGATCAATAATCTTTTGTTTTCATCTAAAACT TTTGATTTCTGAGATTATTTTTCACGTGCCTGCTTGTTTTATAGAGTAGTCATGCTGTCA CCTATCTTTTAATGTGTTTTATCTTTTTTGTCTTGGTTGATCTAGATAATTCTGTGTGAT ATTACCTTGGCCTTTTGTTTTTGTGCTACTTGAAAGATTAGATTGGTCTACTAAAAAGGT GTGCATTTTTGTGAGGTTACCAATCTTTTCCGGAGCATTGTTTGCATAAATATGTGAAGC TTTGTTGATGATGTTATTACGTGGAACATGTTGTGTTGGAATGGAAAATGAAAGATGAGA CGTTCCTATCGAGCAAAGCAGATCTTGTTGTTTTCAATGGAAGTATTTTGTATTGATATT TTTCCTGGTATTGTGTTCCCCTTGTAGTGCAAATGTGCGATTAGTGTCTCATATGGAGCG TTTAATAAAAGTATATCCGATAACTTGAATATCTCAAAACTTCCTGATTTTAAATACCTA TAAATAGCTGAACATATTTGTCTTTCCTCTCAACTCAGTGACTCAATATTAGGTTGTGGG GCAATTAAATTGCTGTGTCTGAGCTTCTTTTTTTTTGCCTGTTTTGTTTCAGGGCTGTGA TACAGTTGCAATGGCATCTGTAACTGATGAGACAGCTAAGATTGAGGGTTTGACATCTGC TGCAGCCTTTGTGGAGGGTGGCATTCAGGACGCATGTGATGATGCATGCAGCATTTGCCT TGAGGCTTTCTGTGAGAGTGACCCTTCTGCATTGACTGGCTGCAAACATGAGTTCCATCT CCAATGCATTCTTGAATGGTGCCAGAGAAGTTCACAGTGCCCAATGTGTTGGCAGCCTAT TACTATGAAGGATCCTACCAGTCAGGAGCTGCTTGAGGCAGTAGAGCGTGAGAGGAATAT AAGAACTAATCAAACTCGGAACACAACTATATTTCATCATCCTGCTCTTGGGGATTTTGA GCTGCAGCATCTGCCTGTTGGTAATGATGCTGAGCTTGAAGAGCGTATACTGCAGCATCT AGCTGCTGCTGCTGCAATGGGAAGGGCACACCATCTTGGAAGAAGGGAGGGGCACAGGGG ACGATCTGGCTCTCATGGTCGTCCACATTTCCTAGTTTTCTCTACACAACCAAATTCACC TTCTGCTGGCACAATCTCTTCATCTTCTGCTCATATGGAGGGAGAAAATGATTCAAATCC TGCCACACCTAGAGCTAGCGAGTCATCTCCACGAGCTATTCGCATTGGAGAAGTGGGAAA CCAAAGTCCTGGGATGCTTACCTACGATGCTGAACAGGATGCTGTCGTTTCTTCCGGAAA TAGCACTCCTGTATCGAGTCCTAGGTTTTTTAACAGGAGACACTCCACTGGACAGTCAAC TCCAGACAGGGCTGGGCCATCGGATATTCAGTCTTTCTCAGACTCCCTGAAGTCCCGCTT AAATGCCGTCTCTATGAAGTACAAAGAATCTATTACAAAGAGTACTCGAGGGTGGAAGGA GAGATTGTTTTCACGTAATTCATCCGTGGCGGATCTTGGTTCTGAAGTGAGAAGAGAAGT TAATGCTGGAATTGCGTCCGTATCACGGATGATGGAGCGTCTGGAAACTAGAGGAAATAG CAGAACAAGTGATAGCCCGGCAGCATCCACTTCTGAAGTTCCCTCTGCTACAGAATCAAG CAATGAAAGGGTTACAGAGAGCAACTCTGCTGCTGCTGCTGCTGGTGGTGGTACTACCAC TACGGGTACCAGCGCTAGCAACGCCTCCGCCCCTTGTGTTGCGACATCCGGTTCAAATTA GGACATGTAAGGGTCTCAGAAAGAAGGCTTACACCTGCAATTCTTCATCTTCAAAGGTTT GTGAGCCTGGCGGCAGAGCAGAAGTGCAGTAACATGATGCCGTCATTTTTTTCTCAACCA CTGCATAAACGGCTGCAAGGGGAAAAAAACCAAACGGTGATTTGATGTATTGGCTCGATA AAATGGTGGTGCGTGTGGCCTAGGAGAAGTCGGATTTCATCTTCTGTTTTCGTCTCTTTG TAAAAAAAATCGTCTGAGGGCAGATGTTTACCGGTATAAATAACGGATATGTCATCTTCA TAGTACGTGGATCAGTTATAAATATGATTGGAACAGCAAAGCTTGCTGCT