Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d052922_T011
CDS Infomation

cds chromosome:B73_RefGen_v4:4:204942641:204947322:1 gene:Zm00001d052922 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAGAAGAGGAAGCGGATCCTGGAGCTGCGGGATCGGCTGGACCGGACGCTGGCGATG
CCCGACCTCGCGGAGGAGGCCTCGCTCAGGGCGCTGGTGAAGAAGCAGATCCTGGCGTCG
TCCCTGCCCGGCTCCGATCAAGGTGACATCGATCTCATTGCTGAAACGCGGGCAAAAGAA
GTCTCTGAGTTTCTTGAAATGCTAGATACTTCGAGGGACGGACGATCTTCCAAGGTCCAT
GGGCTGCCACAGAAGGAGTGGAAGGTGAAGCAAGATACAGACCAATTAAGAGTGATGTAC
CGTGAGGGTCCAGAGGGGACACCATTTCATACCTTACTTGCTGAAGGCTTTGCAGATGGA
CCTATTGACGTTTGTACATGTGTGTCATGGGAATCAACTTTATACAAAAAATGGTTTCCA
CAATACAACCTGCCAACTTTTAGAATTGATCAGTCAGGCTGCTTGAAAAAAGTGCGGATT
GGTGAAGAGATTTGTATGGTCAGGGTGAAGGTTCCATGGCCGGTTTCAGAGAGAGAGGCT
ATTCTACACTATTTTGAACTGGAATATCTTAAAGAAGATGTCGTAATTGTGATAATGAAA
ACTTTATCAGACTTGGATGCCATAGATGTTCGAACCCATGGATTTAGTAGGGATGGAATT
CCTGAAGCTGGTGACACAGTTCGGATAGATGTGTTTGGAGGCTTTGTATTGCAACGGATT
ACAAAAGAAAGAAGCTTTTTCAGGGCAATAGCTAATATGGATATCAAGCTAGATTTTGTT
CCACCATGGTTGATCAACTTCATGTCAAGGCAACTAATAGGCAGCGGGCATAAGCTGTAT
CAAAAGGCAGTCAGCACCGTGGCCAGTCATGATGATGACTACAGGAAAGCTTTGAGAGGA
CCGCTCTACGTCAGGATCCGTGAGTACCAGGATTCTGATGACAAGGCGAAGGTGGCAGCA
ACAGAGGAAAATGCTACCGAGGCGCCCCCTGATAATGCCACTACACAAAATCGTTTGTCA
CTAACAAATACCGTATCGAATAGCGAGATTGTGGAGGAGTCCGAACAGAACACATCCGTC
ACTGTGGATAGTCTTCCAACTAGCCAACAACCCTATGTGCCAGTTGAGCAAGCATGGCAG
GTCGGAAACAGGCCATACACCAGTCCTGAGGTGGAGCGTGCGCTGTGCATATTAGACACT
TCTATTGCACTTCTCAGAGGCGATGATAAGGCTGGAAATGTCACCACGCTACAAAATCTG
CTCAGTTACGATGCATCTTTGGAAGCGAGTACTGCTGCTGGTTCCGTAACTTGTCAAACA
AACGTTCTTAACGCAGACAGTCTTCCGAATGGCCATCCTGTTGCCGCAGCGCCACAAGAC
TCCAGAGAGAAAGCTAGCGATAGTGCCGCAGAGGAAGAAGACGCCGGCGACGAAAACTCT
CTGAAAAATCCGACAGCTTCCACTGTGACGAAGAGTGTGTCGATGACATTGCGAAGTGCA
ATAAGGGTGCACGGTGAAGAGAGCCTGGACACTGATGGCTTCTTCCATCAGAACGGTTTC
AGCAACAGCAAGGAGTCAAGGCGAGCGAGGAAGTCTAAGAAGAGATGGCCCTGCTGCTTA
ATCCCTACCACTATGGGATGA

Peptide Sequence

PEP ID

Zm00001d052922_P011
PEP Infomation

pep chromosome:B73_RefGen_v4:4:204942641:204947322:1 gene:Zm00001d052922 transcript:Zm00001d052922_T011 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MEKRKRILELRDRLDRTLAMPDLAEEASLRALVKKQILASSLPGSDQGDIDLIAETRAKE
VSEFLEMLDTSRDGRSSKVHGLPQKEWKVKQDTDQLRVMYREGPEGTPFHTLLAEGFADG
PIDVCTCVSWESTLYKKWFPQYNLPTFRIDQSGCLKKVRIGEEICMVRVKVPWPVSEREA
ILHYFELEYLKEDVVIVIMKTLSDLDAIDVRTHGFSRDGIPEAGDTVRIDVFGGFVLQRI
TKERSFFRAIANMDIKLDFVPPWLINFMSRQLIGSGHKLYQKAVSTVASHDDDYRKALRG
PLYVRIREYQDSDDKAKVAATEENATEAPPDNATTQNRLSLTNTVSNSEIVEESEQNTSV
TVDSLPTSQQPYVPVEQAWQVGNRPYTSPEVERALCILDTSIALLRGDDKAGNVTTLQNL
LSYDASLEASTAAGSVTCQTNVLNADSLPNGHPVAAAPQDSREKASDSAAEEEDAGDENS
LKNPTASTVTKSVSMTLRSAIRVHGEESLDTDGFFHQNGFSNSKESRRARKSKKRWPCCL
IPTTMG

Transcript Sequence

Transcript ID

Zm00001d052922_T011
Transcript Infomation

cdna chromosome:B73_RefGen_v4:4:204942641:204947322:1 gene:Zm00001d052922 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GTCTCCGGTTGCATCCCCGACGTCCTCGCCTGCGGTGAGCGACTCCCGCTCCCGCCCCCC
GCCCAACTGACCGCGGATCTTTCGGCCGGCCGAAATCCCCGTCCTTCTTGGACGCCGCTC
TCTCCTCTCCTGTTCTCGCTTCCGCCGCAGCGTGAGCCCGACTGTATGGGGTTAGGATAG
ATTCTTTCGGGAAAATACTCTCGAGGCTCCGCGGCCGCCTTTCATAGCTGGAGACGCACG
AGCATCGGCATAAAAGCTCGCGTTTTCCTATCCGGGACCCCGAAATTCCGATCCTTTTTC
TTCGGCAGGGAACAGTGCAAAAAGGGGGGAGGGACTGGGACATTAGTTTCTGCGCCTCAC
CTGCTTGATCGATCTGGCGATTTTAACCTCTTTGTCCTTTGGAGAAGTTCCTCATCTTCA
GAGTCGTGTCGTGGGGCGTGCTAGGTGGGAGGGCGGGGCGGAGGAGCTGGAGGTTCCTGG
TAGCGGCTGCCGCCGGCCATGGAGAAGAGGAAGCGGATCCTGGAGCTGCGGGATCGGCTG
GACCGGACGCTGGCGATGCCCGACCTCGCGGAGGAGGCCTCGCTCAGGGCGCTGGTGAAG
AAGCAGATCCTGGCGTCGTCCCTGCCCGGCTCCGATCAAGGTGACATCGATCTCATTGCT
GAAACGCGGGCAAAAGAAGTCTCTGAGTTTCTTGAAATGCTAGATACTTCGAGGGACGGA
CGATCTTCCAAGGTCCATGGGCTGCCACAGAAGGAGTGGAAGGTGAAGCAAGATACAGAC
CAATTAAGAGTGATGTACCGTGAGGGTCCAGAGGGGACACCATTTCATACCTTACTTGCT
GAAGGCTTTGCAGATGGACCTATTGACGTTTGTACATGTGTGTCATGGGAATCAACTTTA
TACAAAAAATGGTTTCCACAATACAACCTGCCAACTTTTAGAATTGATCAGTCAGGCTGC
TTGAAAAAAGTGCGGATTGGTGAAGAGATTTGTATGGTCAGGGTGAAGGTTCCATGGCCG
GTTTCAGAGAGAGAGGCTATTCTACACTATTTTGAACTGGAATATCTTAAAGAAGATGTC
GTAATTGTGATAATGAAAACTTTATCAGACTTGGATGCCATAGATGTTCGAACCCATGGA
TTTAGTAGGGATGGAATTCCTGAAGCTGGTGACACAGTTCGGATAGATGTGTTTGGAGGC
TTTGTATTGCAACGGATTACAAAAGAAAGAAGCTTTTTCAGGGCAATAGCTAATATGGAT
ATCAAGCTAGATTTTGTTCCACCATGGTTGATCAACTTCATGTCAAGGCAACTAATAGGC
AGCGGGCATAAGCTGTATCAAAAGGCAGTCAGCACCGTGGCCAGTCATGATGATGACTAC
AGGAAAGCTTTGAGAGGACCGCTCTACGTCAGGATCCGTGAGTACCAGGATTCTGATGAC
AAGGCGAAGGTGGCAGCAACAGAGGAAAATGCTACCGAGGCGCCCCCTGATAATGCCACT
ACACAAAATCGTTTGTCACTAACAAATACCGTATCGAATAGCGAGATTGTGGAGGAGTCC
GAACAGAACACATCCGTCACTGTGGATAGTCTTCCAACTAGCCAACAACCCTATGTGCCA
GTTGAGCAAGCATGGCAGGTCGGAAACAGGCCATACACCAGTCCTGAGGTGGAGCGTGCG
CTGTGCATATTAGACACTTCTATTGCACTTCTCAGAGGCGATGATAAGGCTGGAAATGTC
ACCACGCTACAAAATCTGCTCAGTTACGATGCATCTTTGGAAGCGAGTACTGCTGCTGGT
TCCGTAACTTGTCAAACAAACGTTCTTAACGCAGACAGTCTTCCGAATGGCCATCCTGTT
GCCGCAGCGCCACAAGACTCCAGAGAGAAAGCTAGCGATAGTGCCGCAGAGGAAGAAGAC
GCCGGCGACGAAAACTCTCTGAAAAATCCGACAGCTTCCACTGTGACGAAGAGTGTGTCG
ATGACATTGCGAAGTGCAATAAGGGTGCACGGTGAAGAGAGCCTGGACACTGATGGCTTC
TTCCATCAGAACGGTTTCAGCAACAGCAAGGAGTCAAGGCGAGCGAGGAAGTCTAAGAAG
AGATGGCCCTGCTGCTTAATCCCTACCACTATGGGATGATGTGGGCCCATCGTAGGACCT
CGTTCGTTCAAGTTAAGTTGCTGATTTTTTGAGTGTACTATTAACAAACAGTAAACTACA
GAAATTTAGCGCTTCGTCAGTTACACGATGTGGGTTCAGACGGTATGTTATAGCGCGTAG
ATAATGTCTTGGTAAATGTAAAGTAGAATCGTTGTAAACAACACGTAATTCTTCTCACGA
GAGCTCTGATTTGGGG