Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d052921_T004
CDS Infomation	cds chromosome:B73_RefGen_v4:4:204933283:204939183:1 gene:Zm00001d052921 gene_biotype:protein_coding transcript_biotype:protein_coding description:THUMP domain-containing protein
Sequence	ATGGCCCCCGGTGGAGAGGGCAAGCCAAGCACGGGCGGCGGCGGCGGCGGCGTCAAGGTT GTAGTTGCACAATGTGATGGAACTGCTGTCCATTATGCCTTGTTCTATGAAGACCTGGTG GATGGGAAAGGATCGGATGAGAAGCCTAAAAACATTCCAGACAAGCCACTGAACAAAAAG ATAAAGTTTGAGGACTCTGATTCCTCAGATGATGAGGATGAAGACAACTCTGGTGAGGAA GCCGACAATGGGAATGTGAATGATGTGGAGAAAGGTGAAACCGCTCCATCTGAGAAGCAA CAGGAGGTGCTTGATACCTCTAATACCGCAAGCAAGGACAATACTGCTCTATCTGAGAAG AAAGAGGAGGTGCTTGATACCTCTGATACCGTGAGTAAGGACAATGAGGAACAAGCAGTC ACTGCTGATGAACCAAGAGAAAAGAAGCAACGAGTGGAAGATCCTCCAGTTTTTGAGCAG GCCGTGCAAAAAGAGACTGCTGATGAACCAAAGGAGTCCACTGATAAACCAAAGGAGTCC AGTGAAAAAAATATTGACGATTTAATTGATGAGGACCTGAAAGAAATAGGGGACAGGAAA AAGAGGCTCTTTGCAAGCCTCGAGACAGGCTGCAATGGATGCATATTCATTCAAATGCAT AAAAGAGCAGGAGACCCTGGTCCAGTTGAGATTGTACAAAACATGATGTCATCTGCTGCA TTGACTCGTAAACATATGTCAAGATTTATTCTGCGAGTTTTGCCTGTTGAGGTGGCATGC TATGCATCTGAAGAGGAAATAACAAAGGCAATTAGTCCCCTTATTGAAAAGTACTTCCCA AAAGAATGCTCCTCAGGTCATAAGGCAAGTTGCCTACTTCATTGCTTCCTCATTTTTCTT GTATTCCTTTTGTTAGGGAGGAATGTTCTGTTTGCAGTGTTATATGAAGCAAGGTCAAAC ACAGGAATTGATAGAATGAAAATCATAAACGCAGCAGCGAAATCTGTACCACAACCTCAT AAAGTTGACCTGAAGAACCCAGACAAGACTATTGTTGTCCAGATTGCAAAGACCATATGC ATGATTGGAGTTGTGGAAAGGTACAAAGAGCTCTCGAAGTTCAACCTAAGGCAGCTGACC TCACCGGAGTCGGAGAAGTAA

Peptide Sequence

PEP ID	Zm00001d052921_P004
PEP Infomation	pep chromosome:B73_RefGen_v4:4:204933283:204939183:1 gene:Zm00001d052921 transcript:Zm00001d052921_T004 gene_biotype:protein_coding transcript_biotype:protein_coding description:THUMP domain-containing protein
Sequence	MAPGGEGKPSTGGGGGGVKVVVAQCDGTAVHYALFYEDLVDGKGSDEKPKNIPDKPLNKK IKFEDSDSSDDEDEDNSGEEADNGNVNDVEKGETAPSEKQQEVLDTSNTASKDNTALSEK KEEVLDTSDTVSKDNEEQAVTADEPREKKQRVEDPPVFEQAVQKETADEPKESTDKPKES SEKNIDDLIDEDLKEIGDRKKRLFASLETGCNGCIFIQMHKRAGDPGPVEIVQNMMSSAA LTRKHMSRFILRVLPVEVACYASEEEITKAISPLIEKYFPKECSSGHKASCLLHCFLIFL VFLLLGRNVLFAVLYEARSNTGIDRMKIINAAAKSVPQPHKVDLKNPDKTIVVQIAKTIC MIGVVERYKELSKFNLRQLTSPESEK

Transcript Sequence

Transcript ID	Zm00001d052921_T004
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:204933283:204939183:1 gene:Zm00001d052921 gene_biotype:protein_coding transcript_biotype:protein_coding description:THUMP domain-containing protein
Sequence	ATGGCCCCCGGTGGAGAGGGCAAGCCAAGCACGGGCGGCGGCGGCGGCGGCGTCAAGGTT GTAGTTGCACAATGTGATGGAACTGCTGTCCATTATGCCTTGTTCTATGAAGACCTGGTG GATGGGAAAGGATCGGATGAGAAGCCTAAAAACATTCCAGACAAGCCACTGAACAAAAAG ATAAAGTTTGAGGACTCTGATTCCTCAGATGATGAGGATGAAGACAACTCTGGTGAGGAA GCCGACAATGGGAATGTGAATGATGTGGAGAAAGGTGAAACCGCTCCATCTGAGAAGCAA CAGGAGGTGCTTGATACCTCTAATACCGCAAGCAAGGACAATACTGCTCTATCTGAGAAG AAAGAGGAGGTGCTTGATACCTCTGATACCGTGAGTAAGGACAATGAGGAACAAGCAGTC ACTGCTGATGAACCAAGAGAAAAGAAGCAACGAGTGGAAGATCCTCCAGTTTTTGAGCAG GCCGTGCAAAAAGAGACTGCTGATGAACCAAAGGAGTCCACTGATAAACCAAAGGAGTCC AGTGAAAAAAATATTGACGATTTAATTGATGAGGACCTGAAAGAAATAGGGGACAGGAAA AAGAGGCTCTTTGCAAGCCTCGAGACAGGCTGCAATGGATGCATATTCATTCAAATGCAT AAAAGAGCAGGAGACCCTGGTCCAGTTGAGATTGTACAAAACATGATGTCATCTGCTGCA TTGACTCGTAAACATATGTCAAGATTTATTCTGCGAGTTTTGCCTGTTGAGGTGGCATGC TATGCATCTGAAGAGGAAATAACAAAGGCAATTAGTCCCCTTATTGAAAAGTACTTCCCA AAAGAATGCTCCTCAGGTCATAAGGCAAGTTGCCTACTTCATTGCTTCCTCATTTTTCTT GTATTCCTTTTGTTAGGGAGGAATGTTCTGTTTGCAGTGTTATATGAAGCAAGGTCAAAC ACAGGAATTGATAGAATGAAAATCATAAACGCAGCAGCGAAATCTGTACCACAACCTCAT AAAGTTGACCTGAAGAACCCAGACAAGACTATTGTTGTCCAGATTGCAAAGACCATATGC ATGATTGGAGTTGTGGAAAGGTACAAAGAGCTCTCGAAGTTCAACCTAAGGCAGCTGACC TCACCGGAGTCGGAGAAGTAAGCCTATGAGTGACAAAATCTTCCAGGCAAAACGTGGACC AACTTAAATCAGCAGCAGCGTCAGGTGGTTAGGCGCTAGCGAATTAAATTAAGGCCGGCC GAACCTCACTGTCTTGAAAGATTCAGATGTTCTAATGTTTAATGCTTTACCACCAGTGGT TAGTGGTTGCTGGTTCATGCTTCCCAGGTTAGAGTCACGATTTTTTTTTTTGAGGCTGTA GAAAGATCTGACGATACTTCATGTGTGCTTTCTCTCTGACGATGGTTCCATACAGGGGCT TACCAAAGACGTAGAATCTATCGTTGCAGCTCCATTGCTCTGAGCATTTCTATAGCTTGA ATAAA