Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d052916_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:4:204719770:204725360:-1 gene:Zm00001d052916 gene_biotype:protein_coding transcript_biotype:protein_coding description:Chalcone synthase 8
Sequence	ATGAGATGTGAGAAGATGATGGTAAAAAAACGATACCTGCAAGTCAACGAGGAGCTGTTC CGTGAGCATCCCGAGTTCTTGGACCCTGCAGCTCCAAGTCTAGAAGGCAAGCTAGCCGTC GTGGCCAGTGTCATGCCAGGGCTTGTGGCCGCTGCCGCAGAGAAAGCCATTGCCGAATGG GGCCGACCGGCTGAAGACATCACGCACCTCGTCTTCGCCACCAGCAGCAGTGCTCAACTG CCCCACATCGATCTCCGCATCGCTTCCCTTCTCGGGTTAAGCACCACCGTGCAGCGTACG GTGATCGGCTTTCATGGCTGCAGCGGCAGCTCCGCGGCGCTCCGCGTTGCCAAGGACATC GCCGAGAACAACCGCAGCGCACGAGTCCTCGTCGCTTGCGCAGACATGTTGAGCGTCATG GATGGTTACCTAGTCCCCAACGTAGTAGCCCACCGCTACGGAATCATCGGCCACGCCATT TTCGGTGACGGTGCTGGTGCAGTTGTCGTCGGAAGCCGGCCGCAGGAACCCGTAGAGCGC CCAATCTTCGAGATGGTGTCAGCGTCGCAGGCCACGCTACCCGGCTCGGAGCTGGCGGTT GCTGCCGAGCTCACCAATTTCGGCATGGAGTACCGCCTCGAGTTTGGAGAGCTGGCGGCG GGGGTCGGCGACAACATCGAGCGGTGTCTGATCGACGCGCTGTCGCCGCTCGGCATTGGT AGTGTTGGCTGGAATAACCTCTTCTGGGCGGTGCACCCGGGTGGCCCCAAGGTCATGGAC AACTTCACGGCGGCTCTGAGGCTAGAGCCCGGGAAGTTGGCGCCCAGCCGGCAGGTGTTC AGCGAGTACGGCAACATGGTGGGCCCGACTCTGATCTTTGTCCTCGATGAGGTTATACGT CGTCGCCAGCAAGATCACGAGGAAGGGAGCTGCGAGTGGGGGTTCATGGTGGGGTTCGGC CCGGGGTTCACCATCGATGTAATGGCATTGCATGCGTGCAGTGGTGAGAAGATGATGGTA AAAAAACGCTACTTGCAAGTCAATGAGGAGCTCTTCAGTGTGCACCCCGAGTTCTTGGAC CCTGCAGCTCCAAGTCTGCAAGGCAAGCTAGCTGTCGTGGCCGGTGCCATGCCAGGGCTT GTGGCTGCTGCCGCAGAGAAAGCCATTGCCGACTGGGGCCGCCCGGCCGGAGACATCACC CACCTCGTCTTCGCCACCAGTTCCAGTGCCCAGCTGCCTCACATTGACCTCCGCATCGCT GCCCTTCTCGGGTTAAGCACCACTGTGCAGCGCACGGTGATCGGCTTTCACGCCTGCAGC GGCAGCTCCGCCGCGCTCCGCGTTGCCAAGTACATCGCCGAGAACAACCGCAGCGCGCGA GTCCTCGTCGCTTGCGCGGACATGTGGAGCGTCATGGATAGTTACGTAGTTCCTAACGTA GACCACCGCTACGGAATTATTGGCCACGCCTTTATCGGTGACGGTGCCGGCGCAGTTGTC GTCGGAAGCCGACCACAGGAACCCGTTGAGCGCCCAATCTTCGAGATGGTATCAGCGTCG CAGGCCACGGTGCCCGGCTCGGAGCGGGCGGTTGCCGTCGAGCTCACCAATTGTGGCCTG GAGTATCGCCTCGAGTTTGGAGATGTGGCGGCGGAGGTCGGTGGCAACATCGAGCGGTGC CTGCTTGACGCGCTGTCGCCGTTGGGCATTGGTAGTGTTGGCTGGAATAACCTCTTCTGG GTGGTGCACCCGGGTGGCCCCAGGATCATGGACACCTTCACGGCGGCTCTCAAGCTACAG CCCGAGAAGCTGTCTGCCAGTCGGCGTGTGCTTAGGGAGTACGGCAACATGACCGGCCCG ACTCTGATCTTTGTCCTCGACGAGGCTATACGCCGTCGCCAGCTCGACCACGAGGAGGGG AGCTGCGAGTGGGGGCTCATGGTGGGATTGGGCCCGGGGTTCACCATTGATGTAATGGCA TTGCGTGCGTGCAGTGGTAAATCCACACCAACACCAAGAATCAAGAGTAGTCTGTAA

Peptide Sequence

PEP ID	Zm00001d052916_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:4:204719770:204725360:-1 gene:Zm00001d052916 transcript:Zm00001d052916_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Chalcone synthase 8
Sequence	MRCEKMMVKKRYLQVNEELFREHPEFLDPAAPSLEGKLAVVASVMPGLVAAAAEKAIAEW GRPAEDITHLVFATSSSAQLPHIDLRIASLLGLSTTVQRTVIGFHGCSGSSAALRVAKDI AENNRSARVLVACADMLSVMDGYLVPNVVAHRYGIIGHAIFGDGAGAVVVGSRPQEPVER PIFEMVSASQATLPGSELAVAAELTNFGMEYRLEFGELAAGVGDNIERCLIDALSPLGIG SVGWNNLFWAVHPGGPKVMDNFTAALRLEPGKLAPSRQVFSEYGNMVGPTLIFVLDEVIR RRQQDHEEGSCEWGFMVGFGPGFTIDVMALHACSGEKMMVKKRYLQVNEELFSVHPEFLD PAAPSLQGKLAVVAGAMPGLVAAAAEKAIADWGRPAGDITHLVFATSSSAQLPHIDLRIA ALLGLSTTVQRTVIGFHACSGSSAALRVAKYIAENNRSARVLVACADMWSVMDSYVVPNV DHRYGIIGHAFIGDGAGAVVVGSRPQEPVERPIFEMVSASQATVPGSERAVAVELTNCGL EYRLEFGDVAAEVGGNIERCLLDALSPLGIGSVGWNNLFWVVHPGGPRIMDTFTAALKLQ PEKLSASRRVLREYGNMTGPTLIFVLDEAIRRRQLDHEEGSCEWGLMVGLGPGFTIDVMA LRACSGKSTPTPRIKSSL

Transcript Sequence

Transcript ID	Zm00001d052916_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:204719770:204725360:-1 gene:Zm00001d052916 gene_biotype:protein_coding transcript_biotype:protein_coding description:Chalcone synthase 8
Sequence	ATGAGATGTGAGAAGATGATGGTAAAAAAACGATACCTGCAAGTCAACGAGGAGCTGTTC CGTGAGCATCCCGAGTTCTTGGACCCTGCAGCTCCAAGTCTAGAAGGCAAGCTAGCCGTC GTGGCCAGTGTCATGCCAGGGCTTGTGGCCGCTGCCGCAGAGAAAGCCATTGCCGAATGG GGCCGACCGGCTGAAGACATCACGCACCTCGTCTTCGCCACCAGCAGCAGTGCTCAACTG CCCCACATCGATCTCCGCATCGCTTCCCTTCTCGGGTTAAGCACCACCGTGCAGCGTACG GTGATCGGCTTTCATGGCTGCAGCGGCAGCTCCGCGGCGCTCCGCGTTGCCAAGGACATC GCCGAGAACAACCGCAGCGCACGAGTCCTCGTCGCTTGCGCAGACATGTTGAGCGTCATG GATGGTTACCTAGTCCCCAACGTAGTAGCCCACCGCTACGGAATCATCGGCCACGCCATT TTCGGTGACGGTGCTGGTGCAGTTGTCGTCGGAAGCCGGCCGCAGGAACCCGTAGAGCGC CCAATCTTCGAGATGGTGTCAGCGTCGCAGGCCACGCTACCCGGCTCGGAGCTGGCGGTT GCTGCCGAGCTCACCAATTTCGGCATGGAGTACCGCCTCGAGTTTGGAGAGCTGGCGGCG GGGGTCGGCGACAACATCGAGCGGTGTCTGATCGACGCGCTGTCGCCGCTCGGCATTGGT AGTGTTGGCTGGAATAACCTCTTCTGGGCGGTGCACCCGGGTGGCCCCAAGGTCATGGAC AACTTCACGGCGGCTCTGAGGCTAGAGCCCGGGAAGTTGGCGCCCAGCCGGCAGGTGTTC AGCGAGTACGGCAACATGGTGGGCCCGACTCTGATCTTTGTCCTCGATGAGGTTATACGT CGTCGCCAGCAAGATCACGAGGAAGGGAGCTGCGAGTGGGGGTTCATGGTGGGGTTCGGC CCGGGGTTCACCATCGATGTAATGGCATTGCATGCGTGCAGTGGTGAGAAGATGATGGTA AAAAAACGCTACTTGCAAGTCAATGAGGAGCTCTTCAGTGTGCACCCCGAGTTCTTGGAC CCTGCAGCTCCAAGTCTGCAAGGCAAGCTAGCTGTCGTGGCCGGTGCCATGCCAGGGCTT GTGGCTGCTGCCGCAGAGAAAGCCATTGCCGACTGGGGCCGCCCGGCCGGAGACATCACC CACCTCGTCTTCGCCACCAGTTCCAGTGCCCAGCTGCCTCACATTGACCTCCGCATCGCT GCCCTTCTCGGGTTAAGCACCACTGTGCAGCGCACGGTGATCGGCTTTCACGCCTGCAGC GGCAGCTCCGCCGCGCTCCGCGTTGCCAAGTACATCGCCGAGAACAACCGCAGCGCGCGA GTCCTCGTCGCTTGCGCGGACATGTGGAGCGTCATGGATAGTTACGTAGTTCCTAACGTA GACCACCGCTACGGAATTATTGGCCACGCCTTTATCGGTGACGGTGCCGGCGCAGTTGTC GTCGGAAGCCGACCACAGGAACCCGTTGAGCGCCCAATCTTCGAGATGGTATCAGCGTCG CAGGCCACGGTGCCCGGCTCGGAGCGGGCGGTTGCCGTCGAGCTCACCAATTGTGGCCTG GAGTATCGCCTCGAGTTTGGAGATGTGGCGGCGGAGGTCGGTGGCAACATCGAGCGGTGC CTGCTTGACGCGCTGTCGCCGTTGGGCATTGGTAGTGTTGGCTGGAATAACCTCTTCTGG GTGGTGCACCCGGGTGGCCCCAGGATCATGGACACCTTCACGGCGGCTCTCAAGCTACAG CCCGAGAAGCTGTCTGCCAGTCGGCGTGTGCTTAGGGAGTACGGCAACATGACCGGCCCG ACTCTGATCTTTGTCCTCGACGAGGCTATACGCCGTCGCCAGCTCGACCACGAGGAGGGG AGCTGCGAGTGGGGGCTCATGGTGGGATTGGGCCCGGGGTTCACCATTGATGTAATGGCA TTGCGTGCGTGCAGTGGTAAATCCACACCAACACCAAGAATCAAGAGTAGTCTGTAAGGG AGAGCCAGAACTCAGAAGCGGCCCTTTGGTTGTCTGTTTGTCAGTGCGTTTGTACGTGTC TTCATCCCAATAAAATAAATAAATAACTGTGGTTTGGCTTTGTGGCA