Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d052905_T003
CDS Infomation	cds chromosome:B73_RefGen_v4:4:204257780:204262214:1 gene:Zm00001d052905 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SBP-transcription factor 7 description:Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein
Sequence	ATGCACTCCGCCTCGCCGGCGGCGTCGCTGTCGCCGTCCCCGCCTGCTTCGGGGCAGGAC CTGGTGGTCAGGCCGAGCAAGCGGGTGCGGTCAGGATCGCCAGGCAGCGCGGGCGGTGGC GGTGGCGGGGCTGCCAACGGAGGCGCGGGCTACCCGATGTGCCAGGTGGATGAGTGCCGA GCGGATCTGACCGGCGCCAAGGACTACCACAGGAGGCACAAGGTCTGCGAGACCCACAGC AAGACCATCAGGGCCGTCGTCGCCAACCAGGCGCAGCGCTTCTGCCAGCAGTGTAGTAGA TTTCACCCACTCGCGGAGTTTGACGAGGGTAAGAGGAGCTGCCGGCGTAGGCTTGCTGGG CACAACCGGCGGAGAAGAAAAACCCAGCCAGCAGATGTTTCTTCGCAGTTGCTGCTACCT GGAAACCAAGAAAATGCAGCAAATAGGACGCAGGATATTGTCAATCTAATTACAGTGATT GCGCACTTGCATGGTTCTAGCGTCGGTAAAGTGCCTAGCATTCCTCCCATACCAGATAAG CAGAATCTGGTTGAAATTATCAGCAAAATAAATTCATTCAACAATATGACCTCTGCGGAC AAATCTCCTCCATCTGAAGTCGTTGATTTGGATGCTTTGCAAGAGCAACAAGTGCAACGG CAGGATTCTGTGGGGAAGACGACCAACGGAATCGACAAGCAAACTGTGCCATCAACCATG GATTTGCTAGGAGTTTTTCCAACTGGCCTTGCAACTTCAACACCTGAGACCAATACATCT CAGTCCCAAGGGAGCAGTGACAGCAGTGGTAATAACAAGAGCAAGAGCCATTCAACAGAG CCAGTAACTGTTGTAAATTCACATGATAAATCAACCCGAGATTTCTCTGCTGCTGGTTTC ATGAGAAGCAACAGCACACACGAAAGCCAACCTCATATATACAAGCAGACAGAACAAGAA ACCAGACCATACTTGTCACTGCAGCTGTTTGGCAGCACTGAGGAGGATTTTCCACCTAAG ATGGACTCAGTGAATAAGTACTTATCTTCTGAGAGTAGCAATCCTCTGGATGAGAGATCT CCTTCATCCTCTCCGCCTATAACCCGCAAGTTTTTCCCCATACACTCGGTTGATGAAGAG GTTCGGCACCCTCATATTACAGATTATGGGGAAGATGCTACGATGGGTGAAGTTAGCACA AATCAGGCATGGTTGGCACCACCACTTGATCTCTTCAAGGATTCAGAGCGTCCCATCGAG AACGGATCGCCACCAAATCCTGGTTACCAGTCCTGCTATGCCTCAACATCTTGTTCAGAT CATTCACCTTCAACCTCAAACTCAGATGGACAGGATCGGACTGGTAGGATTATTTTTAAG CTGTTTGGCAAGGAACCTAGCACAATACCTGGGAACCTTCGTGATGATATAGTAAATTGG CTCAAACACAGCCCTACTGAAATGGAGGGTTACATTCGCCCCGGTTGCCTTGTACTATCC ATGTACCTATTAATGCCGGGTATTGCATGGGATGAGCTTGAAGAAAATCTCCTCCAGAGA GTAAACTCATTAGTTCAAAGTTCTGATTTGGATTTCTGGAGAAAAGGAAGGTTTTTAGTT CGAACCAACTCCCAGTTGGTATCATATAAAGCAGGAATGACCCGTTTATCGAAATCGTGG AGAACATGGAATACCCCTGAATTGACCCTTGTGTCACCAATTGCTGTTGTTGGTGGGCAG AAGACCTCCCTCATTCTTAAAGGCCGCAATCTATCTATTCCTGGCACACAGATCCACTGT ACAAGCATAGGGAAGTACATATCCAAAGAAGTTCTGTGCTCAGCATATCCAGGTACCATA TATGATGATTCAGGTGTTGAGACATTTGACTTGCCAGGACAACCAGATCTTATTCTTGGG CGCTGCTTTGTTGAGGTAGAAAACAGGTTCAGGGGTAACAGCTTCCCTGTTATTGTTGCT AGTTCAAGCGTTTGCCAGGAGTTGCGAAATCTAGAAGTTGAGTTCGAGGATTCGCAGGTT CTTGATGTTTCTTCGGATGGTCAGATTCATGATTCTCGGCAGCCAAAGACATCGGTTCAA GTTCTGCACTTCCTTAATGAACTCGGCTGGCTCTTTCAGAGGGCTTCTGCCTGTACATCG TCCACCAGATCTGATGTGTCTGATTTGGATTTGATTCGGTTTTCAACCGCACGGTTCAGA TACCTTTTACTGTTCTGTAGTGAGCGCGACTGGTGCTCTCTTACTAAAACACTTCTGGAC ATTCTTGCCAAGAGAAGCCTGGCCAGCGAGGAACTATCAAAGGAGACTATGGAGATGCTG GCTGAGATTCACCTCCTGAACAGAGCAGTAAAAAGAAAGAGTAGGAACATGGTGCACCTA CTTGTGAAGTTCGTTGTAATTTGCCCCGACAATTCCAAGGTTTACCCCTTCCTTCCGAAC TTGCCTGGCCCTGGTGGTTTAACTCCGCTGCATCTTGCTGCGTCCATCGAGAATGCAGAG GATATAGTTGACGCCTTGACAGACGACCCTCAACAGACTGGTGTAACCTGTTGGCAGACA GTTCTAGACGACGACGGCCAATCTCCCGAAACATATGCCAAGTTGAGGAACCATAATTCC TATAATGAGCTCGTAGCGCAAAAGCTGGTGGACATGAAGAACAACCAGGTCACAGTAAGG GTTAACGGCGATGGGATTCGTGCGGATCGGTTAGGAAATGATGTTGGTGACCGCAAAAGA TCTGGGGTTCAGGCGCTGCAAATAAGATCCTGCTCCCAGTGTGCCATTCTGGAGTCTGGT GTGCTAATGCAGCCCGTGCGGTCAAGGGGGTTCCTTGCTCGGCCCTATATCCATTCGATG CTTGCTATAGCGGCAGTATGCGTCTGCGTCTGTGTATTCATGCGAGCGTTGCTGCGGATC AATTCTGGTAAATCCTTCAAGTGGGAGAGGCTGGATTATGGTACGATATAA

Peptide Sequence

PEP ID	Zm00001d052905_P003
PEP Infomation	pep chromosome:B73_RefGen_v4:4:204257780:204262214:1 gene:Zm00001d052905 transcript:Zm00001d052905_T003 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SBP-transcription factor 7 description:Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein
Sequence	MHSASPAASLSPSPPASGQDLVVRPSKRVRSGSPGSAGGGGGGAANGGAGYPMCQVDECR ADLTGAKDYHRRHKVCETHSKTIRAVVANQAQRFCQQCSRFHPLAEFDEGKRSCRRRLAG HNRRRRKTQPADVSSQLLLPGNQENAANRTQDIVNLITVIAHLHGSSVGKVPSIPPIPDK QNLVEIISKINSFNNMTSADKSPPSEVVDLDALQEQQVQRQDSVGKTTNGIDKQTVPSTM DLLGVFPTGLATSTPETNTSQSQGSSDSSGNNKSKSHSTEPVTVVNSHDKSTRDFSAAGF MRSNSTHESQPHIYKQTEQETRPYLSLQLFGSTEEDFPPKMDSVNKYLSSESSNPLDERS PSSSPPITRKFFPIHSVDEEVRHPHITDYGEDATMGEVSTNQAWLAPPLDLFKDSERPIE NGSPPNPGYQSCYASTSCSDHSPSTSNSDGQDRTGRIIFKLFGKEPSTIPGNLRDDIVNW LKHSPTEMEGYIRPGCLVLSMYLLMPGIAWDELEENLLQRVNSLVQSSDLDFWRKGRFLV RTNSQLVSYKAGMTRLSKSWRTWNTPELTLVSPIAVVGGQKTSLILKGRNLSIPGTQIHC TSIGKYISKEVLCSAYPGTIYDDSGVETFDLPGQPDLILGRCFVEVENRFRGNSFPVIVA SSSVCQELRNLEVEFEDSQVLDVSSDGQIHDSRQPKTSVQVLHFLNELGWLFQRASACTS STRSDVSDLDLIRFSTARFRYLLLFCSERDWCSLTKTLLDILAKRSLASEELSKETMEML AEIHLLNRAVKRKSRNMVHLLVKFVVICPDNSKVYPFLPNLPGPGGLTPLHLAASIENAE DIVDALTDDPQQTGVTCWQTVLDDDGQSPETYAKLRNHNSYNELVAQKLVDMKNNQVTVR VNGDGIRADRLGNDVGDRKRSGVQALQIRSCSQCAILESGVLMQPVRSRGFLARPYIHSM LAIAAVCVCVCVFMRALLRINSGKSFKWERLDYGTI

Transcript Sequence

Transcript ID	Zm00001d052905_T003
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:204257780:204262214:1 gene:Zm00001d052905 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SBP-transcription factor 7 description:Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein
Sequence	GGCCGTGGCTGTGGCTGAGGCTGAGTGGGGCGAGCCCGGAGGACTTGAGAAGCGATGCAG AGGGAGGTGGGCCCGCAGGTGGCCCCTCCGCTCTTCATCCACCACCAGATCCAGCCGATG CCTCCCCACGCCGCGGCCGCCGTGAAGAAGCGCGGCCAGCCGTGTCCGGCCGCCGCGGCG GCGCCCGCGGAGGCCGCTGCGGGGAACTGGAACCCCAGGCTGTGGGACTGGGACAGCCGC GCGCTCACCGCCAGGCCGTCGGCCGATGCACTCCGCCTCGCCGGCGGCGTCGCTGTCGCC GTCCCCGCCTGCTTCGGGGCAGGACCTGGTGGTCAGGCCGAGCAAGCGGGTGCGGTCAGG ATCGCCAGGCAGCGCGGGCGGTGGCGGTGGCGGGGCTGCCAACGGAGGCGCGGGCTACCC GATGTGCCAGGTGGATGAGTGCCGAGCGGATCTGACCGGCGCCAAGGACTACCACAGGAG GCACAAGGTCTGCGAGACCCACAGCAAGACCATCAGGGCCGTCGTCGCCAACCAGGCGCA GCGCTTCTGCCAGCAGTGTAGTAGATTTCACCCACTCGCGGAGTTTGACGAGGGTAAGAG GAGCTGCCGGCGTAGGCTTGCTGGGCACAACCGGCGGAGAAGAAAAACCCAGCCAGCAGA TGTTTCTTCGCAGTTGCTGCTACCTGGAAACCAAGAAAATGCAGCAAATAGGACGCAGGA TATTGTCAATCTAATTACAGTGATTGCGCACTTGCATGGTTCTAGCGTCGGTAAAGTGCC TAGCATTCCTCCCATACCAGATAAGCAGAATCTGGTTGAAATTATCAGCAAAATAAATTC ATTCAACAATATGACCTCTGCGGACAAATCTCCTCCATCTGAAGTCGTTGATTTGGATGC TTTGCAAGAGCAACAAGTGCAACGGCAGGATTCTGTGGGGAAGACGACCAACGGAATCGA CAAGCAAACTGTGCCATCAACCATGGATTTGCTAGGAGTTTTTCCAACTGGCCTTGCAAC TTCAACACCTGAGACCAATACATCTCAGTCCCAAGGGAGCAGTGACAGCAGTGGTAATAA CAAGAGCAAGAGCCATTCAACAGAGCCAGTAACTGTTGTAAATTCACATGATAAATCAAC CCGAGATTTCTCTGCTGCTGGTTTCATGAGAAGCAACAGCACACACGAAAGCCAACCTCA TATATACAAGCAGACAGAACAAGAAACCAGACCATACTTGTCACTGCAGCTGTTTGGCAG CACTGAGGAGGATTTTCCACCTAAGATGGACTCAGTGAATAAGTACTTATCTTCTGAGAG TAGCAATCCTCTGGATGAGAGATCTCCTTCATCCTCTCCGCCTATAACCCGCAAGTTTTT CCCCATACACTCGGTTGATGAAGAGGTTCGGCACCCTCATATTACAGATTATGGGGAAGA TGCTACGATGGGTGAAGTTAGCACAAATCAGGCATGGTTGGCACCACCACTTGATCTCTT CAAGGATTCAGAGCGTCCCATCGAGAACGGATCGCCACCAAATCCTGGTTACCAGTCCTG CTATGCCTCAACATCTTGTTCAGATCATTCACCTTCAACCTCAAACTCAGATGGACAGGA TCGGACTGGTAGGATTATTTTTAAGCTGTTTGGCAAGGAACCTAGCACAATACCTGGGAA CCTTCGTGATGATATAGTAAATTGGCTCAAACACAGCCCTACTGAAATGGAGGGTTACAT TCGCCCCGGTTGCCTTGTACTATCCATGTACCTATTAATGCCGGGTATTGCATGGGATGA GCTTGAAGAAAATCTCCTCCAGAGAGTAAACTCATTAGTTCAAAGTTCTGATTTGGATTT CTGGAGAAAAGGAAGGTTTTTAGTTCGAACCAACTCCCAGTTGGTATCATATAAAGCAGG AATGACCCGTTTATCGAAATCGTGGAGAACATGGAATACCCCTGAATTGACCCTTGTGTC ACCAATTGCTGTTGTTGGTGGGCAGAAGACCTCCCTCATTCTTAAAGGCCGCAATCTATC TATTCCTGGCACACAGATCCACTGTACAAGCATAGGGAAGTACATATCCAAAGAAGTTCT GTGCTCAGCATATCCAGGTACCATATATGATGATTCAGGTGTTGAGACATTTGACTTGCC AGGACAACCAGATCTTATTCTTGGGCGCTGCTTTGTTGAGGTAGAAAACAGGTTCAGGGG TAACAGCTTCCCTGTTATTGTTGCTAGTTCAAGCGTTTGCCAGGAGTTGCGAAATCTAGA AGTTGAGTTCGAGGATTCGCAGGTTCTTGATGTTTCTTCGGATGGTCAGATTCATGATTC TCGGCAGCCAAAGACATCGGTTCAAGTTCTGCACTTCCTTAATGAACTCGGCTGGCTCTT TCAGAGGGCTTCTGCCTGTACATCGTCCACCAGATCTGATGTGTCTGATTTGGATTTGAT TCGGTTTTCAACCGCACGGTTCAGATACCTTTTACTGTTCTGTAGTGAGCGCGACTGGTG CTCTCTTACTAAAACACTTCTGGACATTCTTGCCAAGAGAAGCCTGGCCAGCGAGGAACT ATCAAAGGAGACTATGGAGATGCTGGCTGAGATTCACCTCCTGAACAGAGCAGTAAAAAG AAAGAGTAGGAACATGGTGCACCTACTTGTGAAGTTCGTTGTAATTTGCCCCGACAATTC CAAGGTTTACCCCTTCCTTCCGAACTTGCCTGGCCCTGGTGGTTTAACTCCGCTGCATCT TGCTGCGTCCATCGAGAATGCAGAGGATATAGTTGACGCCTTGACAGACGACCCTCAACA GACTGGTGTAACCTGTTGGCAGACAGTTCTAGACGACGACGGCCAATCTCCCGAAACATA TGCCAAGTTGAGGAACCATAATTCCTATAATGAGCTCGTAGCGCAAAAGCTGGTGGACAT GAAGAACAACCAGGTCACAGTAAGGGTTAACGGCGATGGGATTCGTGCGGATCGGTTAGG AAATGATGTTGGTGACCGCAAAAGATCTGGGGTTCAGGCGCTGCAAATAAGATCCTGCTC CCAGTGTGCCATTCTGGAGTCTGGTGTGCTAATGCAGCCCGTGCGGTCAAGGGGGTTCCT TGCTCGGCCCTATATCCATTCGATGCTTGCTATAGCGGCAGTATGCGTCTGCGTCTGTGT ATTCATGCGAGCGTTGCTGCGGATCAATTCTGGTAAATCCTTCAAGTGGGAGAGGCTGGA TTATGGTACGATATAAACTGCCCGCCCGCCGGGGAAGACCTGAGCCTCGTGGTAATTATT GAGTTAGCAAGCAGTTGGTGGCCTTGGACGGTATGGAGATTGTTCTATGC