Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d052865_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:4:202871774:202875602:1 gene:Zm00001d052865 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ribosomal protein L9/RNase H1
Sequence

ATGGCCGCCGTCCGCGCCGCCCTCCGCCTGCAGCGCCAGTGCCTCGCCGCCAACCCCTTT
CTCTTCTCCGGGCATGGCCTCCGCTACCGCAAGCTTGAGGTCATCCTCACCACGACTATT
GATAAGCTGGGGAAAGCAGGCGAGGTGGTCAAGGTGGCGCCTGGCCACTTCCGCAACCAC
CTTATGCCCAAGATGCTCGCAGTCCCGAACCTGGACAAATTCGCCATACTCATCCGAGAG
CAGCGCAAGCTCTATCAACGCGAAGAGGAGGTCGCGGTGAAACAAGTCACGGAGAAAGAT
GATGATGCACGGCTACAGGAAGAAAGAATGAAGCAGTACCAAACGGCAGCGAAGCGGCTA
GATAACGCACTCTTGGTGTTGAGGAGGTTCATCTCGACTGGAAACGAGCTGCGTACTCCT
GTAACAAAAGACGAAATTGTTTCCGAGGTGGCGAGGCAGCTCAACATCAACATCCATCCG
GAGAACCTGCATCTGCACTCACCTTTGGCGTCGCTCGGCGAATTTGAGTTGCCCCTCCGG
TTACCGCAGAACATACCGTGCCCAGAAGGTAAGCTCCAGTGGACTCTGAAGGTGAAGATC
AGGAGAAAATGA

Peptide Sequence

PEP ID

Zm00001d052865_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:4:202871774:202875602:1 gene:Zm00001d052865 transcript:Zm00001d052865_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ribosomal protein L9/RNase H1
Sequence

MAAVRAALRLQRQCLAANPFLFSGHGLRYRKLEVILTTTIDKLGKAGEVVKVAPGHFRNH
LMPKMLAVPNLDKFAILIREQRKLYQREEEVAVKQVTEKDDDARLQEERMKQYQTAAKRL
DNALLVLRRFISTGNELRTPVTKDEIVSEVARQLNINIHPENLHLHSPLASLGEFELPLR
LPQNIPCPEGKLQWTLKVKIRRK

Transcript Sequence

Transcript ID

Zm00001d052865_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:4:202871774:202875602:1 gene:Zm00001d052865 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ribosomal protein L9/RNase H1
Sequence

GTTTATGGGCTGGAATGGGCCGCTCAAACTGGCCCGTTACGTGAATTTGGCGGGGCTGCC
GCAGGGATCCGAGACGTGGTGGCTGCACAGCGACGTCCGTGGGAGCGGGCGAGCGACTGC
AGGCAGAGGGTTTCGTCCGAACCCTAGTGTCCTCCACACGCCGTCGCCATGGCCGCCGTC
CGCGCCGCCCTCCGCCTGCAGCGCCAGTGCCTCGCCGCCAACCCCTTTCTCTTCTCCGGG
CATGGCCTCCGCTACCGCAAGCTTGAGGTCATCCTCACCACGACTATTGATAAGCTGGGG
AAAGCAGGCGAGGTGGTCAAGGTGGCGCCTGGCCACTTCCGCAACCACCTTATGCCCAAG
ATGCTCGCAGTCCCGAACCTGGACAAATTCGCCATACTCATCCGAGAGCAGCGCAAGCTC
TATCAACGCGAAGAGGAGGTCGCGGTGAAACAAGTCACGGAGAAAGATGATGATGCACGG
CTACAGGAAGAAAGAATGAAGCAGTACCAAACGGCAGCGAAGCGGCTAGATAACGCACTC
TTGGTGTTGAGGAGGTTCATCTCGACTGGAAACGAGCTGCGTACTCCTGTAACAAAAGAC
GAAATTGTTTCCGAGGTGGCGAGGCAGCTCAACATCAACATCCATCCGGAGAACCTGCAT
CTGCACTCACCTTTGGCGTCGCTCGGCGAATTTGAGTTGCCCCTCCGGTTACCGCAGAAC
ATACCGTGCCCAGAAGGTAAGCTCCAGTGGACTCTGAAGGTGAAGATCAGGAGAAAATGA
GCGCAGGAACTGGGGAAGTTTCTTTTGTCCCCCCACAATCTGGTGTATGGTACCAAACCA
TTGTTATGCAAAGTTTCCTTTGCATAACCCGGTCCCAGTTTAGCTCCGAAACATTTTTTT
TCTGATGTATAATAAAAGAGTAAGGTTGCAGAAAGATTGAATAGCTTCTACATCCTTCAG
TTCCCTTCTTTGCAGCAACATTGCACATTGTGATGGATAGGGGTGAAAACGGGTCGAGAA
TATCCGCTGGGTACCGGATAGTGCAAATAGACCAAGTCAGATTTAGAAAAGGAGAGAAGT
TCTCTTCACTAGATTGCTCTTACAAATGTGTAAACTTAGAGAAATATTACCAGTGAATCG
AAGAACTTAGAGAGGAAGAAACAATCGCAATAAGAAATCACACAAGATAGAC