Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d052856_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:4:202676879:202680949:1 gene:Zm00001d052856 gene_biotype:protein_coding transcript_biotype:protein_coding description:Calcium-transporting ATPase 2 plasma membrane-type
Sequence	ATGGAGAGTTACCTGAACGAGAACTTCGGGGGCGTCAAGGCGAAGCACTCGTCGGAGGAG GCCCTGGGGCGATGGCGGAGCGTGGTCGGCGTCGTCAAGAACCCCACCAGGCGGTTCCGC TTCACCGCCAACCTGGGCAAGCGCTCCGAGGCCGCCGCCATGAAGCGGTCCAACCAGGAG AAGCTGCGGGTCGCGGTGCTCGTCTCCAAGGCCGCGCTCCAGTTCATCCACGGCCTGCCG TCGCAGGGCGACTACGCCGTCCCCGCCGACGTCAAGGCGGCCGGCTTCGGCGTCTGCGCC GAGGAGCTGGGCGCCATCGTGGAGACCCACGACGTGAAGAAGCTCAAGTCCCACGGCGGC GTGGACGGCCTCGTATCCAGGCTGTCCACCTCGGCGTCCGACGGCCTCGACGATAGTAAC GAGCCGATGACGGCGGCCCGGCAGGAGCTCTTCGGCGTCAACCGCTTCGCCGAGGCGGAG CCCCGCAGCTTCTGGGTCTTCGTGTGGGAGGCGCTGCAGGACATGACGCTGATGATCCTC GCCGCCTGCGCGCTCGTGTCTCTAGTCGTCGGCATCGCCACCGAGGGGTGGCCCCACGGC GCGCACGACGGGCTAGGCATCGTCGCCAGCATCCTGCTCGTCGTCTTCGTCACCGCCACC AGCGACTACCGCCAGTCGCTGCAGTTCAAGGACCTGGACAAGGAGAAGAAGAAGATCGCC GTGCAGGTCACGCGGCGCGGGTACCGGCAGAGGCTCTCCATCTACGACCTCCTCGCAGGC GACATCGTGCACCTCTCCATCGGCGACCAGGTGCCCGCCGACGGGCTCTTCGTGTCGGGC TTCTCGATGCTCATCGACGAGTCCAGCCTCACCGGGGAGAGCGAGCCCGTGGCGGTGAGC GCCGAGAACCCGTTCCTGCTGTCGGGGACCAAGGTGCAGGACGGCGCGTGCAAGATGCTG GTCACCACCGTCGGCATGCGCACGCAGTGGGGCAAGCTGATGGCCACGCTCAGCGAGGGC GGCGACGACGAGACGCCGCTGCAGGTCAAGCTGAACGGTGTGGCCACCATCATCGGCAAG ATCGGCCTCGCCTTCGCCGTCGTCACGTTCGCGGTGCTCACGCAGAGCCTGTTCTGGCGC AAGCTCGCCGACGGCTCCTGGCTCAGCTGGACTGGCGACGACGCGCTGGAGCTGCTCGAG TTCTTCGCCATCGCCGTCACCATCGTGGTCGTGGCCGTCCCCGAGGGCCTGCCGCTGGCC GTGACGCTCAGCCTCGCGTTCGCCATGAAGAAGATGATGAACGACAGAGCGCTCGTGCGC CACCTGGCGGCCTGCGAGACCATGGGCTCCGCCACCACCATCTGCAGCGACAAGACCGGC ACGCTGACCACCAACCACATGACCGTCGTCAAGGCCTGCATCTGCGGCAAGGTGAGGGAC GTGAACAGCTCCGTGGAGACCAAGACGCTGCCCTCCGACCTGCCGGCGTCCGTCGTGGCC ATGCTCCTGCAGTCCGCCTTCAACAACACCGGCGGCGACATCGTGCTCGACCAGGACGGG AGGCGCGAGATCCTGGGCACGCCGACCGAGGCAGCCATCCTGGAGTTCGGGCTGTCCCTG GGCGGCGACTTCGCGGCGGTGCGCAAGGCCAGCACGCTCCTCAAGGTGGAGCCCTTCAAC TCGGCCAGGAAGAGGATGGGGGTGGTCATCCAGCTCCCCGGCGGCGCGCTGCGGGCGCAC TGCAAGGGCGCGTCGGAGATCGTCCTGGCGTCCTGCACCAGGTACCTGGACGAGCGCGGC AGCGCCGTCGCCCTGGACGGCGCGACCGCGGACCGCCTCAGGGCCACCATCGACAGCTTC GCCAACGAGGCGCTCCGCACGCTGTGCCTCGCCTACGTGGACGTCGGCGACGGGTTCTCC CCGAGCGAGCAGATCCCGACGGACGGGTACACGTGCATCTGCGTCGTGGGGATCAAGGAC CCCGTCCGTCCCGGCGTGAAGGAGTCGGTGGCGATCTGCAGGTCCGCAGGCATCACCGTC AGGATGGTCACGGGCGACAACATCAACACGGCCAAGGCGATCGCGCGGGAATGCGGCATC CTGACTGACGGCGGCGTCGCCATTGAAGGCCCCGACTTCAGAGTGAAGACTGAAGAAGAG CTGCAAGAACTGATACCAAAGATACAGGTGATGGCAAGATCTTCGCCGCTTGACAAGCAC ACCCTGGTGAAGCATCTACGAACTACGTTTGACGAAGTTGTCGCGGTGACCGGCGATGGC ACGAACGATGCACCCGCGCTACACGAAGCCGACATTGGGCTTGCGATGGGCATTGCTGGC ACTGAGGTGGCCAAGGAGAGTGCCGACGTCATTATCCTCGACGACAACTTCTCCACCATA GTCACTGTCGCCAAATGGGGGCGATCGGTGTACATCAACATCCAGAAGTTCGTGCAGTTT CAGCTGACAGTCAACGTCGTCGCTCTCGTTGTCAACTTCTCCTCAGCTTGCTTGATAGGG AGCGCTCCCCTGACAGCCGTGCAGCTGCTGTGGGTGAACATGATCATGGACACGCTGGGA GCGCTGGCGCTGGCCACGGAGCCTCCGAACGACGAGCTGATGAAGAGGACCCCCGTGGGG AGGAAAGGGAACTTCATCAGCAACGTCATGTGGAGGAACATCATGGGGCAGGCCCTGTAC CAGTTCCTCGTCATCTGGAGCCTGCAGTCTCGAGGGAAATCGCTCTTCGGGATCGAGCGC CGCGCCGACTCGGACCTCGTCCTCAACACCATCATCTTCAACTGCTTCGTCTTCTGCCAG GTTTTCAACGAGGTGAGCTCGAGGGAGATGGAGAGGGTGAACGTGCTCCGAGGCATCCTA GACAACAACGTGTTCGCCATGGTGCTCGGCAGCACCGTGGTGTTCCAGTTCGTGATCGTC CAGTGCCTGGGCAGCTTCGCCAACACGACCCCTCTCAGCGTCGCGCAGTGGGGCGCCTGC GTCGCCATCGGGTTCGTCGGCATGCCCGTCGCCGTGGCGGTGAAGATGGTGCCGGTGGAG TAG

Peptide Sequence

PEP ID	Zm00001d052856_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:4:202676879:202680949:1 gene:Zm00001d052856 transcript:Zm00001d052856_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Calcium-transporting ATPase 2 plasma membrane-type
Sequence	MESYLNENFGGVKAKHSSEEALGRWRSVVGVVKNPTRRFRFTANLGKRSEAAAMKRSNQE KLRVAVLVSKAALQFIHGLPSQGDYAVPADVKAAGFGVCAEELGAIVETHDVKKLKSHGG VDGLVSRLSTSASDGLDDSNEPMTAARQELFGVNRFAEAEPRSFWVFVWEALQDMTLMIL AACALVSLVVGIATEGWPHGAHDGLGIVASILLVVFVTATSDYRQSLQFKDLDKEKKKIA VQVTRRGYRQRLSIYDLLAGDIVHLSIGDQVPADGLFVSGFSMLIDESSLTGESEPVAVS AENPFLLSGTKVQDGACKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGK IGLAFAVVTFAVLTQSLFWRKLADGSWLSWTGDDALELLEFFAIAVTIVVVAVPEGLPLA VTLSLAFAMKKMMNDRALVRHLAACETMGSATTICSDKTGTLTTNHMTVVKACICGKVRD VNSSVETKTLPSDLPASVVAMLLQSAFNNTGGDIVLDQDGRREILGTPTEAAILEFGLSL GGDFAAVRKASTLLKVEPFNSARKRMGVVIQLPGGALRAHCKGASEIVLASCTRYLDERG SAVALDGATADRLRATIDSFANEALRTLCLAYVDVGDGFSPSEQIPTDGYTCICVVGIKD PVRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDGGVAIEGPDFRVKTEEE LQELIPKIQVMARSSPLDKHTLVKHLRTTFDEVVAVTGDGTNDAPALHEADIGLAMGIAG TEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALVVNFSSACLIG SAPLTAVQLLWVNMIMDTLGALALATEPPNDELMKRTPVGRKGNFISNVMWRNIMGQALY QFLVIWSLQSRGKSLFGIERRADSDLVLNTIIFNCFVFCQVFNEVSSREMERVNVLRGIL DNNVFAMVLGSTVVFQFVIVQCLGSFANTTPLSVAQWGACVAIGFVGMPVAVAVKMVPVE

Transcript Sequence

Transcript ID	Zm00001d052856_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:202676879:202680949:1 gene:Zm00001d052856 gene_biotype:protein_coding transcript_biotype:protein_coding description:Calcium-transporting ATPase 2 plasma membrane-type
Sequence	GAGTGGCAGCCCACAAATTCCGGCAGATTTCCGAGCGTGGTGGGGGTCTGGGGGAGGTGG CAGTCGCTCCGTCGACGGGCTGCCCTCCATCACTCTCCTGCCATCCGTCCTGTTCGGATC CAGAACAAACCACTGCCACGCGCCCACGCCTCGACGTCTCCTCTCGATCTCGCACGTCCT GACCGGCCCATCGCCATCGCCACAGCATCGGGACCGAGCAGCTCGCCGAGGATGCTGCAG CTGGGCTGAGCCTGAGGAGAGCGACCGATCGAGAGATCATCGATCGAGGATCAGGGACGA CTCAGGGTGTGACCGTCCGTGTGCGCGAGGTTGGGCGCGCGGGCAAAGATGGAGAGTTAC CTGAACGAGAACTTCGGGGGCGTCAAGGCGAAGCACTCGTCGGAGGAGGCCCTGGGGCGA TGGCGGAGCGTGGTCGGCGTCGTCAAGAACCCCACCAGGCGGTTCCGCTTCACCGCCAAC CTGGGCAAGCGCTCCGAGGCCGCCGCCATGAAGCGGTCCAACCAGGAGAAGCTGCGGGTC GCGGTGCTCGTCTCCAAGGCCGCGCTCCAGTTCATCCACGGCCTGCCGTCGCAGGGCGAC TACGCCGTCCCCGCCGACGTCAAGGCGGCCGGCTTCGGCGTCTGCGCCGAGGAGCTGGGC GCCATCGTGGAGACCCACGACGTGAAGAAGCTCAAGTCCCACGGCGGCGTGGACGGCCTC GTATCCAGGCTGTCCACCTCGGCGTCCGACGGCCTCGACGATAGTAACGAGCCGATGACG GCGGCCCGGCAGGAGCTCTTCGGCGTCAACCGCTTCGCCGAGGCGGAGCCCCGCAGCTTC TGGGTCTTCGTGTGGGAGGCGCTGCAGGACATGACGCTGATGATCCTCGCCGCCTGCGCG CTCGTGTCTCTAGTCGTCGGCATCGCCACCGAGGGGTGGCCCCACGGCGCGCACGACGGG CTAGGCATCGTCGCCAGCATCCTGCTCGTCGTCTTCGTCACCGCCACCAGCGACTACCGC CAGTCGCTGCAGTTCAAGGACCTGGACAAGGAGAAGAAGAAGATCGCCGTGCAGGTCACG CGGCGCGGGTACCGGCAGAGGCTCTCCATCTACGACCTCCTCGCAGGCGACATCGTGCAC CTCTCCATCGGCGACCAGGTGCCCGCCGACGGGCTCTTCGTGTCGGGCTTCTCGATGCTC ATCGACGAGTCCAGCCTCACCGGGGAGAGCGAGCCCGTGGCGGTGAGCGCCGAGAACCCG TTCCTGCTGTCGGGGACCAAGGTGCAGGACGGCGCGTGCAAGATGCTGGTCACCACCGTC GGCATGCGCACGCAGTGGGGCAAGCTGATGGCCACGCTCAGCGAGGGCGGCGACGACGAG ACGCCGCTGCAGGTCAAGCTGAACGGTGTGGCCACCATCATCGGCAAGATCGGCCTCGCC TTCGCCGTCGTCACGTTCGCGGTGCTCACGCAGAGCCTGTTCTGGCGCAAGCTCGCCGAC GGCTCCTGGCTCAGCTGGACTGGCGACGACGCGCTGGAGCTGCTCGAGTTCTTCGCCATC GCCGTCACCATCGTGGTCGTGGCCGTCCCCGAGGGCCTGCCGCTGGCCGTGACGCTCAGC CTCGCGTTCGCCATGAAGAAGATGATGAACGACAGAGCGCTCGTGCGCCACCTGGCGGCC TGCGAGACCATGGGCTCCGCCACCACCATCTGCAGCGACAAGACCGGCACGCTGACCACC AACCACATGACCGTCGTCAAGGCCTGCATCTGCGGCAAGGTGAGGGACGTGAACAGCTCC GTGGAGACCAAGACGCTGCCCTCCGACCTGCCGGCGTCCGTCGTGGCCATGCTCCTGCAG TCCGCCTTCAACAACACCGGCGGCGACATCGTGCTCGACCAGGACGGGAGGCGCGAGATC CTGGGCACGCCGACCGAGGCAGCCATCCTGGAGTTCGGGCTGTCCCTGGGCGGCGACTTC GCGGCGGTGCGCAAGGCCAGCACGCTCCTCAAGGTGGAGCCCTTCAACTCGGCCAGGAAG AGGATGGGGGTGGTCATCCAGCTCCCCGGCGGCGCGCTGCGGGCGCACTGCAAGGGCGCG TCGGAGATCGTCCTGGCGTCCTGCACCAGGTACCTGGACGAGCGCGGCAGCGCCGTCGCC CTGGACGGCGCGACCGCGGACCGCCTCAGGGCCACCATCGACAGCTTCGCCAACGAGGCG CTCCGCACGCTGTGCCTCGCCTACGTGGACGTCGGCGACGGGTTCTCCCCGAGCGAGCAG ATCCCGACGGACGGGTACACGTGCATCTGCGTCGTGGGGATCAAGGACCCCGTCCGTCCC GGCGTGAAGGAGTCGGTGGCGATCTGCAGGTCCGCAGGCATCACCGTCAGGATGGTCACG GGCGACAACATCAACACGGCCAAGGCGATCGCGCGGGAATGCGGCATCCTGACTGACGGC GGCGTCGCCATTGAAGGCCCCGACTTCAGAGTGAAGACTGAAGAAGAGCTGCAAGAACTG ATACCAAAGATACAGGTGATGGCAAGATCTTCGCCGCTTGACAAGCACACCCTGGTGAAG CATCTACGAACTACGTTTGACGAAGTTGTCGCGGTGACCGGCGATGGCACGAACGATGCA CCCGCGCTACACGAAGCCGACATTGGGCTTGCGATGGGCATTGCTGGCACTGAGGTGGCC AAGGAGAGTGCCGACGTCATTATCCTCGACGACAACTTCTCCACCATAGTCACTGTCGCC AAATGGGGGCGATCGGTGTACATCAACATCCAGAAGTTCGTGCAGTTTCAGCTGACAGTC AACGTCGTCGCTCTCGTTGTCAACTTCTCCTCAGCTTGCTTGATAGGGAGCGCTCCCCTG ACAGCCGTGCAGCTGCTGTGGGTGAACATGATCATGGACACGCTGGGAGCGCTGGCGCTG GCCACGGAGCCTCCGAACGACGAGCTGATGAAGAGGACCCCCGTGGGGAGGAAAGGGAAC TTCATCAGCAACGTCATGTGGAGGAACATCATGGGGCAGGCCCTGTACCAGTTCCTCGTC ATCTGGAGCCTGCAGTCTCGAGGGAAATCGCTCTTCGGGATCGAGCGCCGCGCCGACTCG GACCTCGTCCTCAACACCATCATCTTCAACTGCTTCGTCTTCTGCCAGGTTTTCAACGAG GTGAGCTCGAGGGAGATGGAGAGGGTGAACGTGCTCCGAGGCATCCTAGACAACAACGTG TTCGCCATGGTGCTCGGCAGCACCGTGGTGTTCCAGTTCGTGATCGTCCAGTGCCTGGGC AGCTTCGCCAACACGACCCCTCTCAGCGTCGCGCAGTGGGGCGCCTGCGTCGCCATCGGG TTCGTCGGCATGCCCGTCGCCGTGGCGGTGAAGATGGTGCCGGTGGAGTAGGCGGGCCTC TCGATCTCTCTCGGAGTTGAGAAACTGGAGGCAGGCAGGCGGGCAGTAGTTGTTGGCTTG AAATGTCTATAACAGCAGTATTCTTTTTTTTTTGTGGTAAGAACAGAACAGAACAGAACA GGCTTTATCCATCTGTGATTCTTGTTAAGTAACCCTAGTTAGGGTTATGTGGGCAAATAC CTGCTTTGTCCCTGAGGGGTCTCACATCTCTATATAAGGAACATGTACACCACGTCATAA TACAGAGATCAGAAAGAGGCCAGAGGTCCAACCCT