Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d052852_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:4:202627305:202631414:-1 gene:Zm00001d052852 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable protein phosphatase 2C 6
Sequence	ATGGGCTCCTGCCTCTCCTCCGAGACCCCCGCCGCCAGCGCCGGCGCGGCGGCGTGGTGG CGGAAGGGGCGCCGCGGGACCCGGGAAGGCGCGGCTGGCGGCCTCCCCAGCGGCGGCAAG AAGCCGCCCGGACGAGGGGGAGAGATGACGGAGGACGAGCTCGCGCGGGTCTCCGGCAGG ATGTGCGGCAACGGCGCCAGCGCGGTGGCGTGCCTCCACACGCAGCAGGGGCGGAAGGGT ACCAACCAGGACGCCATGGTCGTGTGGGAGAGTTTTAACTCAAGTGACAGCATCTTCTGT GGTGTGTTTGATGGCCATGGGCCATACGGTCATTTTGTCGCCAAGAAAGTTAGAGATTCA CTTCCTGTCAAGTTGCGCACACAATGGCAGACTAGTGCTAATGGGCCCTGCTCTAGTCCT CATCAAAATGGAAGCATCTCTGGAAGTATCAACTCCGAAGAAACAGCTTCTATTGTCGAT GACGAATGGGGAGATGGTGATAACACTGAGAAGCTTCCTGAGATGTTTCTTCCACTTAAG CGATCTTACCTAAAAGCTTTCAAATTGATGGACAAGGAACTCAAGCTGCATCCCACAGTT GACTGTTTCTGCAGTGGGTCTACGGCGGTAACGTTGGTGAAACAGGGATTGGACCTTGTA ATTGGAAACCTTGGGGACTCGAGAGCAATTATGGGGACAAGAGACGCCTCTAACAATCTA ACTGCTCTGCAACTCACAGTTGATTTGAAGCCTAACCTTCCCAGGGAAGCTGAGAGGATA CAACAATGTAAAGGACGAGTCTTTGCTCTTCAGGATGAGCCAGAAGTCGCCAGAGTGTGG TTGCCCAATAACGACTCCCCTGGACTGGCAATGGCAAGAGCTTTCGGCGACTTCTGCCTT AAAGACTATGGTTTGATATCTGTTCCAGAGATATCGTATCGCCTTCTCACCGAGAAGGAT GAATTCATAATACTAGCCACCGATGGGGTGTGGGACGTTCTCTCGAACAAGGAGGCCGTT GATATTGTGGCGTCAGCCCCGTCTCGGGCAACGGCAGCCAGGGCTCTTGTCGACAGCGCT GTCAGATCGTGGAGGCTCAAGTTCCCAACATCCAAGAGTGATGACTGCGCTGTCGTCTGC TTGTTCTTGGATCGTGCTGGCTCGGCTCAAGAGAGCGAGAGCGAAGCCATTGTGGAGACG GCAGAGCCCACCGGGGAGGAGGTCTGCAGGCGGGATGCCGGTGAGGTCGACGAGGACATG GCAGTCGCAGATGCTGGTGTACATGTAGTATCCAGCGCGGAGCACAGTGCCGAGGCGACT CCGTTGCAGCACTCCACCACGTCAAGGGAGCTCGACGACGAGATTGTACCGGCGGACGAG CACGAGCCTCCCGTCGTCCTGAAGGAGCCTGCGAGGTGCGGGTCTGCTCGCAGCCTGGCA GAGTGCATATCGACGAGCGAGGAAGAGGAGTGGTCCGCGCTCGAAGGCGTGACGCGGGTG AACTCCCTCCTGAACCTCCCGAGAATAATGTCCGGCGACAGGAGATCGGCCAGCTGGAGG AAGCGACGGTGA

Peptide Sequence

PEP ID	Zm00001d052852_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:4:202627305:202631414:-1 gene:Zm00001d052852 transcript:Zm00001d052852_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable protein phosphatase 2C 6
Sequence	MGSCLSSETPAASAGAAAWWRKGRRGTREGAAGGLPSGGKKPPGRGGEMTEDELARVSGR MCGNGASAVACLHTQQGRKGTNQDAMVVWESFNSSDSIFCGVFDGHGPYGHFVAKKVRDS LPVKLRTQWQTSANGPCSSPHQNGSISGSINSEETASIVDDEWGDGDNTEKLPEMFLPLK RSYLKAFKLMDKELKLHPTVDCFCSGSTAVTLVKQGLDLVIGNLGDSRAIMGTRDASNNL TALQLTVDLKPNLPREAERIQQCKGRVFALQDEPEVARVWLPNNDSPGLAMARAFGDFCL KDYGLISVPEISYRLLTEKDEFIILATDGVWDVLSNKEAVDIVASAPSRATAARALVDSA VRSWRLKFPTSKSDDCAVVCLFLDRAGSAQESESEAIVETAEPTGEEVCRRDAGEVDEDM AVADAGVHVVSSAEHSAEATPLQHSTTSRELDDEIVPADEHEPPVVLKEPARCGSARSLA ECISTSEEEEWSALEGVTRVNSLLNLPRIMSGDRRSASWRKRR

Transcript Sequence

Transcript ID	Zm00001d052852_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:202627305:202631414:-1 gene:Zm00001d052852 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable protein phosphatase 2C 6
Sequence	CGCAGTTTGCAGCTAGCGGACACAACAGTCAGGCAGCAGCAGCAGTTACCACTCCGTGCT CCACCGTGTTGCCTCCCTCCCAAGTCCCATTGGCCGCCATGGGCTCCTGCCTCTCCTCCG AGACCCCCGCCGCCAGCGCCGGCGCGGCGGCGTGGTGGCGGAAGGGGCGCCGCGGGACCC GGGAAGGCGCGGCTGGCGGCCTCCCCAGCGGCGGCAAGAAGCCGCCCGGACGAGGGGGAG AGATGACGGAGGACGAGCTCGCGCGGGTCTCCGGCAGGATGTGCGGCAACGGCGCCAGCG CGGTGGCGTGCCTCCACACGCAGCAGGGGCGGAAGGGTACCAACCAGGACGCCATGGTCG TGTGGGAGAGTTTTAACTCAAGTGACAGCATCTTCTGTGGTGTGTTTGATGGCCATGGGC CATACGGTCATTTTGTCGCCAAGAAAGTTAGAGATTCACTTCCTGTCAAGTTGCGCACAC AATGGCAGACTAGTGCTAATGGGCCCTGCTCTAGTCCTCATCAAAATGGAAGCATCTCTG GAAGTATCAACTCCGAAGAAACAGCTTCTATTGTCGATGACGAATGGGGAGATGGTGATA ACACTGAGAAGCTTCCTGAGATGTTTCTTCCACTTAAGCGATCTTACCTAAAAGCTTTCA AATTGATGGACAAGGAACTCAAGCTGCATCCCACAGTTGACTGTTTCTGCAGTGGGTCTA CGGCGGTAACGTTGGTGAAACAGGGATTGGACCTTGTAATTGGAAACCTTGGGGACTCGA GAGCAATTATGGGGACAAGAGACGCCTCTAACAATCTAACTGCTCTGCAACTCACAGTTG ATTTGAAGCCTAACCTTCCCAGGGAAGCTGAGAGGATACAACAATGTAAAGGACGAGTCT TTGCTCTTCAGGATGAGCCAGAAGTCGCCAGAGTGTGGTTGCCCAATAACGACTCCCCTG GACTGGCAATGGCAAGAGCTTTCGGCGACTTCTGCCTTAAAGACTATGGTTTGATATCTG TTCCAGAGATATCGTATCGCCTTCTCACCGAGAAGGATGAATTCATAATACTAGCCACCG ATGGGGTGTGGGACGTTCTCTCGAACAAGGAGGCCGTTGATATTGTGGCGTCAGCCCCGT CTCGGGCAACGGCAGCCAGGGCTCTTGTCGACAGCGCTGTCAGATCGTGGAGGCTCAAGT TCCCAACATCCAAGAGTGATGACTGCGCTGTCGTCTGCTTGTTCTTGGATCGTGCTGGCT CGGCTCAAGAGAGCGAGAGCGAAGCCATTGTGGAGACGGCAGAGCCCACCGGGGAGGAGG TCTGCAGGCGGGATGCCGGTGAGGTCGACGAGGACATGGCAGTCGCAGATGCTGGTGTAC ATGTAGTATCCAGCGCGGAGCACAGTGCCGAGGCGACTCCGTTGCAGCACTCCACCACGT CAAGGGAGCTCGACGACGAGATTGTACCGGCGGACGAGCACGAGCCTCCCGTCGTCCTGA AGGAGCCTGCGAGGTGCGGGTCTGCTCGCAGCCTGGCAGAGTGCATATCGACGAGCGAGG AAGAGGAGTGGTCCGCGCTCGAAGGCGTGACGCGGGTGAACTCCCTCCTGAACCTCCCGA GAATAATGTCCGGCGACAGGAGATCGGCCAGCTGGAGGAAGCGACGGTGAACAGCAGAGG AAGCTCTCCACTGGAGTTCTTCGCCGAGTTCAAATCCTCCCTCAGTCTCTGGGAATCTTC CCCAGGTTGTTTTGACCTCAACCGCGTCAGCGTGTGCGTTCCGGATCGTTTGTTTGTTCA TTCTTGTGCCTTTTTTGCCGGTAGGTGTTCCATGCTTGGGGCTTCTCTGTGTCCGTTTGT GCATAGAAAAGTTTTTTTTTTTGGTTCTGTGAGAAGCTTCTGTAAAACATGCAGCACCTC CTGGAGTGCTATATGTGTATCATTAGGTCATCGTTTTGTTCATCTTATTTGGTTTTTGGT TTGTAGTTTGGATTCGTGTTAGTTGTGCGTTATTGCGATGAGAAGTCCTCGAAATATGTT AC