Gene sequences

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SNP Detection
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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d052851_T020
CDS Infomation	cds chromosome:B73_RefGen_v4:4:202585034:202599340:1 gene:Zm00001d052851 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peroxisome biogenesis protein 5
Sequence	ATGGCGCTGCGGCACCTGGTCACGGGCCAGAACAACTGCGCGCCGGACGGCGCCTCGTCG TCCAACCCCCTCAACGCCCTCGCCAACGCCTTCCTTGGCCAGTCCTCCAAGGCGCAGTCA ATAAAGGAACTTCCTGGTTCTGTTAGTGTTCCATCTACATCTGGCTTCAGCGCGCCTGCT CCCTTGTCAAACATCCCTGGTTCAGAAAATGAGTTCAAACAAGACCAGCGACCTTTTGTG CAGGGCTCTGACTTTATTCATGGTGGTCCTGCTAATGATTGGATTAAGTCTTTTCGGCCT CCGGGGGTTCCTGAACTTGGTGGAATAGAAGCACACTTTCCAGATTTTGAGCAAATTTAT AACAATGCAGGAACAACCTTTCAGCCGCCATTGGATGGTCCACCACAAAGAGTGTTGTCT GGTGTCTTGCATTCCTTTCTCACAAGTGGCCCAGCTGGTGTGCCATTTCAACCTCTTCCA GTACCAGCTGCTCTTGGTTTATCTGAAAGTGACAAACAGTGCATACGTGATCGTAGCTGC ATAATGGCACGGCATATTTTTTCTGACCAACCGGAAGAATATATACAGGCTCAGGTCAAT ACTTTGCTGCATTCGCTTGATATAGACAACCGTATGAGAGGACCTATGCATGGACAATAC CCAGAACTACAGGAGTACTGGAACCAGTCCCAAAGTTCTATGGGTCCTGCCCTGATGCAT AATACCGCTGATAAATGGATTACTGAGTTTGGCAAACAAAATAATAATCCGGAAAATTGG GCAAAGTCTTTCGAACAACAATATGGCCCCAATGGGTGGGCCTCTGAGTTTGAACAGCAT CAGTCTCAGATGGCCATGGGCCAGATGGGAGGAGTGAACATGGCCAACCTGGCTGCTATG GAGCAATCCCGAATGCTTGCACAAACTTTAGCAAGTAATAATGATCCCAAGTTTCAGAAT TCTAAGTTCTTCCAGTTTGTTTCAAAGATGAGCCGGGGTGAACTTATTATAGAAGATAAT CAGGTAAAAGAAGGTTTAGCATCCCAATCCAGTGGCTGGGCTGATGAATTTCAAACACAG TACAAAGCTAATGCAAACTCATGGGCGGATCAGTTTGCACGTGAAGAGGTAATACTAGAC GGTTGGATATATGCATGA

Peptide Sequence

PEP ID	Zm00001d052851_P020
PEP Infomation	pep chromosome:B73_RefGen_v4:4:202585034:202599340:1 gene:Zm00001d052851 transcript:Zm00001d052851_T020 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peroxisome biogenesis protein 5
Sequence	MALRHLVTGQNNCAPDGASSSNPLNALANAFLGQSSKAQSIKELPGSVSVPSTSGFSAPA PLSNIPGSENEFKQDQRPFVQGSDFIHGGPANDWIKSFRPPGVPELGGIEAHFPDFEQIY NNAGTTFQPPLDGPPQRVLSGVLHSFLTSGPAGVPFQPLPVPAALGLSESDKQCIRDRSC IMARHIFSDQPEEYIQAQVNTLLHSLDIDNRMRGPMHGQYPELQEYWNQSQSSMGPALMH NTADKWITEFGKQNNNPENWAKSFEQQYGPNGWASEFEQHQSQMAMGQMGGVNMANLAAM EQSRMLAQTLASNNDPKFQNSKFFQFVSKMSRGELIIEDNQVKEGLASQSSGWADEFQTQ YKANANSWADQFAREEVILDGWIYA

Transcript Sequence

Transcript ID	Zm00001d052851_T020
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:202585034:202599340:1 gene:Zm00001d052851 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peroxisome biogenesis protein 5
Sequence	CTCCGACTCTGTCTCCTGCGCGGCTCCAGCTCACCCTCTCCTCACATCGAGGCGGACCGG CCCACGTCGCCGGCAACCGAAACGTCGGCCGTAGCCTCGCACCTCCGGCATCGGCGAGCG CGCGCGCCCGTCCGGCGGCGGAGATGGCGCTGCGGCACCTGGTCACGGGCCAGAACAACT GCGCGCCGGACGGCGCCTCGTCGTCCAACCCCCTCAACGCCCTCGCCAACGCCTTCCTTG GCCAGTCCTCCAAGGCGCAGTCAATAAAGGAACTTCCTGGTTCTGTTAGTGTTCCATCTA CATCTGGCTTCAGCGCGCCTGCTCCCTTGTCAAACATCCCTGGTTCAGAAAATGAGTTCA AACAAGACCAGCGACCTTTTGTGCAGGGCTCTGACTTTATTCATGGTGGTCCTGCTAATG ATTGGATTAAGTCTTTTCGGCCTCCGGGGGTTCCTGAACTTGGTGGAATAGAAGCACACT TTCCAGATTTTGAGCAAATTTATAACAATGCAGGAACAACCTTTCAGCCGCCATTGGATG GTCCACCACAAAGAGTGTTGTCTGGTGTCTTGCATTCCTTTCTCACAAGTGGCCCAGCTG GTGTGCCATTTCAACCTCTTCCAGTACCAGCTGCTCTTGGTTTATCTGAAAGTGACAAAC AGTGCATACGTGATCGTAGCTGCATAATGGCACGGCATATTTTTTCTGACCAACCGGAAG AATATATACAGGCTCAGGTCAATACTTTGCTGCATTCGCTTGATATAGACAACCGTATGA GAGGACCTATGCATGGACAATACCCAGAACTACAGGAGTACTGGAACCAGTCCCAAAGTT CTATGGGTCCTGCCCTGATGCATAATACCGCTGATAAATGGATTACTGAGTTTGGCAAAC AAAATAATAATCCGGAAAATTGGGCAAAGTCTTTCGAACAACAATATGGCCCCAATGGGT GGGCCTCTGAGTTTGAACAGCATCAGTCTCAGATGGCCATGGGCCAGATGGGAGGAGTGA ACATGGCCAACCTGGCTGCTATGGAGCAATCCCGAATGCTTGCACAAACTTTAGCAAGTA ATAATGATCCCAAGTTTCAGAATTCTAAGTTCTTCCAGTTTGTTTCAAAGATGAGCCGGG GTGAACTTATTATAGAAGATAATCAGGTAAAAGAAGGTTTAGCATCCCAATCCAGTGGCT GGGCTGATGAATTTCAAACACAGTACAAAGCTAATGCAAACTCATGGGCGGATCAGTTTG CACGTGAAGAGGTAATACTAGACGGTTGGATATATGCATGACATGCTTAATGGGGATCAG TTTTCTCTGATAATCATAAATGAAAATTCATACGTCACTGGTATGCAACATTTTAGCTTT CATACCTAGGAATGTGTCAGAAACTAGAAAGTGTCAGGATGATTTCATTCCGTATAGACT AGCAGGATTGCTGAAGCTTCTGATTAGATATCCCCAGACCATGATGGCTGGATATCATTC TCTCTAGGACACTATGATCAAATGACCATCGTTTATACAAATTGTCTAGTGTTCTGGCAT ACTTGGTGTTGGTGTTGGTGTTAGCAGCCTCACACTTTTTGCTCTGTTCACACAAATTAG CCGTGCTCTGATGATATTTCCCCATTATTATCTATTCTCCAGCTTTCACAAGGGGCGGAT AAGTGGGTTAGTGAGTTCTCTAGTCAACATAATCAAGGTGCGCTAAATGAGAGCTGGGTT GATGAGTTCTCGAAATTAAATGTCACTGATGAATGGGCAGAGGAATTCAGTGGAGGTGGT TTTGGCGAAAGCTCTGCTGATCCGTGGGTAGATGAGTTCCAAGAACACTTGTCATCTTTC AAACAAAGTTCAGGCGCCTCTCGAGGGGTTTATGTTTATTCTGAGAACAACCCGTATGTT GGTCACCCTAATCCAATGCAAGAAGGACAGGAGCTCTTCCGCAAGGGCCTCTTAAGTGAA GCTGTTCTTGCTTTAGAGGCTGAAGTTTTGAAGAATCCTGATAATGCTGAAGGTTGGAGG TTGTTAGGCATAACACATGCAGAAAATGATGATGACCAACAGGCCATTGCAGCAATGATG CGTGCGTTGGAAGCTAATCCGACAAACCTTGAAGTTCTTCTTGCTCTTGGTGTTAGTCAC ACAAATGGTTAGTGCTTGGAATTGTGGGAGTAATTTAACACCCTGCCTAATCTGCTCTAG CGCTCTTGAGATAATCTAGTGACACTTGTGATTTGGAAGTAATCTTATTTCTGCACTGAT GTCGAGCTATTTCACTAGGAACAGTGAACAACTAAACAGAACTTATTAAAATGATTCATG TTTGAGAGAAAACATGTCTATTTTCTTTTCTATGTTCAAAGAAGAGAAAACTTTTCTATG CTCCTCCAAGCTTTATGTCAAATAATGGAATAGCAACTATGCAATATAACATTCTGAAAT TTTGTTCAAGTAGAAGATCAATAAAAAAACCAAATTATATGTTATCATGAAAGGTTTTAA GTCTTCTAGCAATTGATGCAGAATTGGAGCAGGGAGAAGCATTAAGGTATCTTTATAGGT GGCTTCAGAATCATCCAAAATATGGTGGCCTTGTCCCTCCGCAGTCAACTGATTCACCTT ATGGTCCTGATGTAAGTACACTGCATGCTATATACTTTAAGTGTGTATATTTCAGTCTAT TTACTTATCACACTCTGGCATCTTCAGATTTCAGATAGGTATCCTGTATACAAGATTAGA TGTTTTTAGCTGTAGTCATATACCTTTTGCCCATTTCTAATACCTTTCAACATATTAATT TCTGTAAATAGTTTCATTTTGCCATGCTAAATGTTTGTCTCATCAGGTTGTTAGATTGTT TAATGACGCTGCTCAGATGTCACCTGAAGATGCAGATGTTCATGTAGTTCTGGGAGTCTT ATACAACCTATCAAGAGAGTATGATAAAGCTATAACTTCATTTAAGACAGCAGTACAGCT CAAACCACAGGACTACTCACTCTGGAACAAGCTTGGTGCAACCCAAGCAAACAGCATCCA GAGTGCTGATGCAATATTGGCGTATCAGCAGGTAACTAGCTCAGAAACATGTTTACTGTT TCAACGTTGGTCTTTTTGCCCACGCACTAGACTTGAAACCCAACTACGTGCGTGCATGGG CGAACATGGGAATCAGCTATGCCAACCAGGTAATTCTTCTTTGCAATTGGTTCTTACCTG GCTTCCTGCGATTTTCTCAACAGTACGACGCTAACATGCAGTGTTGATGGAACACTGTTT TTTTTTGTGAACTGGTACTTTTGCATGCATGGCAATTAGCAACAGGTATAGCACTGGCAC ATGACCTGATAACCCCTATTGACGCAAATCCTTCCATGTTGCTTACGCAGGGTCTGTATG AGGATTCCATTCGATACTATGTAAGGGCAGTTACAATGAACCCAAAAGCTGACAACGCTT GGCAGTACTTGAGGATTTCTCTTGGGTATGCCCTGCTCGCTTGTGATTTACCTACCATGT GAACTTACTACCTGCCTTATGACAAAGGCAGTGAACTAATATATCTTCGCCCCTATCTGA ACCAGCAACGCTTCAAGAGCTGACATGATTGCCGCATGCGACGCCCGCAACCTCGACGCT CTTCAGCGATCTCCATGGAAATGGAATTGGAGGCCAGTAACATTTTTGTATTTGCCTGTT GATTCTTCTGTTTTTATTTTGCTTAAGTGTTGTTGGGTAAATGTATAGGAACTAGGAAGT GAGGGGGAACAACATCCCGTCGATGTGTGAAGTATCATTGCAAGAAGGCAATAGTGGCAA AGGGGGAATTATACAT