Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d052848_T004
CDS Infomation	cds chromosome:B73_RefGen_v4:4:202462929:202466761:1 gene:Zm00001d052848 gene_biotype:protein_coding transcript_biotype:protein_coding description:COP9 signalosome complex subunit 6a
Sequence	ATGTCGGCGCCATCCGACGCCGCGGCGGCATCCGCAGCTCCCGCGCCCGCGCCGACGACT GCCGCCGCCTCCTCTAGCGGCGGGTTCACCTTCAAGCTCCACCCGCTGGTCATTGTGAAC GTCTCCGACCACCACACCCGCGTCAAGGCCCAGGCCGCCTGCTCTGCGGACAGCTCCTCC CCCTCGTCCGGGCCGGGGGCCGGGCAGCCGCCGAGGGTGTTCGGGTGCGTGATCGGGGTG CAGCGCGGGCGGACCGTGGAGATCTTCAACAGCTTCGAGCTCGTGCTCGACCCAGTCTCC GGCACCCTCGACCGCGCCTTCCTCGAGAAGAAGCAGGAGCTCTATAAGAAGGTGTTCCCT GACTTCTACGTGCTCGGTTGGTACTCCACTGGAAGCGATGTGCACGACACCGACATGCAA ATCCACAAAGCCTTGATGGATGTTAACGAAAGCCCTGTTTATCTTCTATTAAATCCTACT ATCAACCTCTCCCAGAAGGATCTCCCTGTGACTATTTATGAGAGTGAGTTGCATGTCATC GATGGGTGTCCTCAGCTTATCTTTGTCAGATCAAATTATACAATTGAGACTGTAGAGGCT GAGAGGATATCTGTGGACCATGTTGCCCATCTCAAACCATCTGATGGTGGTTCAGCAGCA ACTCAGTTGGCTGCTCATCTTACAGGAATACACAGTGCCATCAAGATGCTCAATAGCAGG GTCCGTGTTATCCATCAGTATCTTGTTGCCATGCAAAAAGTGCAAAGCCTTTTGTTCACT GCAGGTGACATTCCAATGGACAATTCGCTGCTTAGGCAAGTCTCAAGCCTTGTAAGAAGG CTACCGGCTACGGAATCACAGAAATTCCAAGATGACTTTTTAATGGAATACAACGACACT CTCCTCATGACTTACCTGGCAATGTTCACTAACTGTTCAAGCACAATGAATGAGTTGGTC GAGAAAATCAACACAAGCTATGAGAGACCGACTACCAGGAGAGGAGGCCGAGGTGCTTTC ATGTAG

Peptide Sequence

PEP ID	Zm00001d052848_P004
PEP Infomation	pep chromosome:B73_RefGen_v4:4:202462929:202466761:1 gene:Zm00001d052848 transcript:Zm00001d052848_T004 gene_biotype:protein_coding transcript_biotype:protein_coding description:COP9 signalosome complex subunit 6a
Sequence	MSAPSDAAAASAAPAPAPTTAAASSSGGFTFKLHPLVIVNVSDHHTRVKAQAACSADSSS PSSGPGAGQPPRVFGCVIGVQRGRTVEIFNSFELVLDPVSGTLDRAFLEKKQELYKKVFP DFYVLGWYSTGSDVHDTDMQIHKALMDVNESPVYLLLNPTINLSQKDLPVTIYESELHVI DGCPQLIFVRSNYTIETVEAERISVDHVAHLKPSDGGSAATQLAAHLTGIHSAIKMLNSR VRVIHQYLVAMQKVQSLLFTAGDIPMDNSLLRQVSSLVRRLPATESQKFQDDFLMEYNDT LLMTYLAMFTNCSSTMNELVEKINTSYERPTTRRGGRGAFM

Transcript Sequence

Transcript ID	Zm00001d052848_T004
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:202462929:202466761:1 gene:Zm00001d052848 gene_biotype:protein_coding transcript_biotype:protein_coding description:COP9 signalosome complex subunit 6a
Sequence	GTCGCCGTCGCCGTCGCAATCGCAACCCACGCCGTCGCACGCCACCTCTCCCTCGGCTCC GACGATGTCGGCGCCATCCGACGCCGCGGCGGCATCCGCAGCTCCCGCGCCCGCGCCGAC GACTGCCGCCGCCTCCTCTAGCGGCGGGTTCACCTTCAAGCTCCACCCGCTGGTCATTGT GAACGTCTCCGACCACCACACCCGCGTCAAGGCCCAGGCCGCCTGCTCTGCGGACAGCTC CTCCCCCTCGTCCGGGCCGGGGGCCGGGCAGCCGCCGAGGGTGTTCGGGTGCGTGATCGG GGTGCAGCGCGGGCGGACCGTGGAGATCTTCAACAGCTTCGAGCTCGTGCTCGACCCAGT CTCCGGCACCCTCGACCGCGCCTTCCTCGAGAAGAAGCAGGAGCTCTATAAGAAGGTGTT CCCTGACTTCTACGTGCTCGGTTGGTACTCCACTGGAAGCGATGTGCACGACACCGACAT GCAAATCCACAAAGCCTTGATGGATGTTAACGAAAGCCCTGTTTATCTTCTATTAAATCC TACTATCAACCTCTCCCAGAAGGATCTCCCTGTGACTATTTATGAGAGTGAGTTGCATGT CATCGATGGGTGTCCTCAGCTTATCTTTGTCAGATCAAATTATACAATTGAGACTGTAGA GGCTGAGAGGATATCTGTGGACCATGTTGCCCATCTCAAACCATCTGATGGTGGTTCAGC AGCAACTCAGTTGGCTGCTCATCTTACAGGAATACACAGTGCCATCAAGATGCTCAATAG CAGGGTCCGTGTTATCCATCAGTATCTTGTTGCCATGCAAAAAGTGCAAAGCCTTTTGTT CACTGCAGGTGACATTCCAATGGACAATTCGCTGCTTAGGCAAGTCTCAAGCCTTGTAAG AAGGCTACCGGCTACGGAATCACAGAAATTCCAAGATGACTTTTTAATGGAATACAACGA CACTCTCCTCATGACTTACCTGGCAATGTTCACTAACTGTTCAAGCACAATGAATGAGTT GGTCGAGAAAATCAACACAAGCTATGAGAGACCGACTACCAGGAGAGGAGGCCGAGGTGC TTTCATGTAGCTCACCTGCCATGATCCTGCTGCTGCTTTCATCTGTGAGGATTTTTCGGG AGTAGCTTATGTCCCTGGTCATTTTTTTGCATGCAATCTATCATGCGCAATCGGCTATAC GGCAGCTCTTGAGTCACTTCAAACTTTCTAGGCAAAACTGATGATTTGCTGGAATTGTAT CAGATCCCACCTGTGCTGAAGTTGATATGTAAAGTTCCTCACCCAG