Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d052801_T021
CDS Infomation	cds chromosome:B73_RefGen_v4:4:201400954:201410178:1 gene:Zm00001d052801 gene_biotype:protein_coding transcript_biotype:protein_coding description:Copper-transporting ATPase PAA1 chloroplastic
Sequence	ATGGACCCGACCACGCCCGTCCTTGCGCTCTCCAAGGCCTTCGCCTCCTCCCGCACCAAG CCCTTCCTCCTCCTCGCCCCGCACCGCCGCCGCTCCCTCTTCGCCGCCCGCGCGTCTGCC CCCTCCTCGTCCTCCGTGCCGGGCGACCTCCTCATCTCGCTCGCGCGGCTCGCGCTCCGC GGCCCCGGACCCCCCGCGGCGCCTCGGCGGTGGTTCGCGAGTGTCTCTTCTGCCTCGCCT CTCGCCTCGGGTGGTCCGCCCCGCGGCGGAGGCGGTCGGGGGAACGGTGATGGTGACGGC GGTGGTGGTGGCGACGGCTGGAAGCGCCCGCGCGCTTCCCAGGGAGCGGGTGTGGTGGAG GAAGCGGCAGCGCAGGGAGCCGATGTCATCGTCCTTGACGTTGGGGGAATGTCGTGTGGT GGATGCGCAGCAAGCGTGAAACGTATTCTGGAGAGTGAGCCCCAGGTACGGTCAGCAACT GTTAACCTTGCCACTGAGATGGCAGTCGTCTGGGCAGTGCCCGAGGATAGTGTTGTTCAG GATTGGAAGGAGCAGCTGGGTGAGAAGCTTGCCAATCAGTTGACGACATGTGGCTATAAA TCCAATCTTCGAGATTCTTCAAAGGTTGGTTCACAAACAGTTTTCGAAAGAAAGATGCAA GACAAACTTGAACAGCTGAAACAAAGTGGTAGAGAACTTGCTGTATCATGGGCATTATGT GCGGTTTGCCTTGTGGGACACATTTCTCACCTTTTTGGAGTTAATATGCCACTGATGCAC GTCATTCATTCCACTGGATTTCATTTGTCTCTGTCAATATTTACATTTGTCGGTCCTGGT CGAAGACTAATACTTGATGGCCTAAAGAGTCTGTTGAAGGGGTCTCCGAACATGAATACG CTGGTTGGTTTAGGTGCTTTGTCATCCTTTGCAGTCAGCTCAATTGCAGCCTTCATTCCG AAGCTGGGGTGGAAGACATTTTTTGAGGAACCAGTTATGTTGATAGCTTTTGTTCTTCTA GGGAAGAATCTGGAGCAGAGGGCAAAACTTAAAGCTACCAGTGATATGACTGGACTGCTT AGTATTCTTCCATCTAAAGCACGCCTAATGGTGGATAATGATGCTGAGAAATCATCATTG ATTGAAGTCCCATGTGATACTCTAGCTGTTGGGGACTATGTTGTTGTGCTACCTGGGGAT CACATCCCAGCAGACGGTATTGTGAAAGCTGGAAGGAGTACAGTTGATGAATCAAGTTTG ACAGGTGAACCTATGCCTGTAACAAAGATAACAGGGGCAGAAGTATCAGCAGGAAGTATT AACTTGAATGGTAAACTCACTGTTGAAGTTAGAAGACCTGGTGGTGAGACTGTCATGTCT GACATACTTCACTTAGTTGAAGAAGCCCAGACAAGGGCGGCCCCTGTTCAACGATTGGCT GATCATTACACCTTTATCCTGCAACCATCTCAACCATCTCCGTGGGATTGGAATAGTACA TTTATCATGGTCAACATCAATCCATGGGTTCTGCAGAGCTTTTTTACTTCTGTAGAGATT TTTGATAGACCAAGTGAATATGGGTGA

Peptide Sequence

PEP ID	Zm00001d052801_P021
PEP Infomation	pep chromosome:B73_RefGen_v4:4:201400954:201410178:1 gene:Zm00001d052801 transcript:Zm00001d052801_T021 gene_biotype:protein_coding transcript_biotype:protein_coding description:Copper-transporting ATPase PAA1 chloroplastic
Sequence	MDPTTPVLALSKAFASSRTKPFLLLAPHRRRSLFAARASAPSSSSVPGDLLISLARLALR GPGPPAAPRRWFASVSSASPLASGGPPRGGGGRGNGDGDGGGGGDGWKRPRASQGAGVVE EAAAQGADVIVLDVGGMSCGGCAASVKRILESEPQVRSATVNLATEMAVVWAVPEDSVVQ DWKEQLGEKLANQLTTCGYKSNLRDSSKVGSQTVFERKMQDKLEQLKQSGRELAVSWALC AVCLVGHISHLFGVNMPLMHVIHSTGFHLSLSIFTFVGPGRRLILDGLKSLLKGSPNMNT LVGLGALSSFAVSSIAAFIPKLGWKTFFEEPVMLIAFVLLGKNLEQRAKLKATSDMTGLL SILPSKARLMVDNDAEKSSLIEVPCDTLAVGDYVVVLPGDHIPADGIVKAGRSTVDESSL TGEPMPVTKITGAEVSAGSINLNGKLTVEVRRPGGETVMSDILHLVEEAQTRAAPVQRLA DHYTFILQPSQPSPWDWNSTFIMVNINPWVLQSFFTSVEIFDRPSEYG

Transcript Sequence

Transcript ID	Zm00001d052801_T021
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:201400954:201410178:1 gene:Zm00001d052801 gene_biotype:protein_coding transcript_biotype:protein_coding description:Copper-transporting ATPase PAA1 chloroplastic
Sequence	CACGACGATGGACCCGACCACGCCCGTCCTTGCGCTCTCCAAGGCCTTCGCCTCCTCCCG CACCAAGCCCTTCCTCCTCCTCGCCCCGCACCGCCGCCGCTCCCTCTTCGCCGCCCGCGC GTCTGCCCCCTCCTCGTCCTCCGTGCCGGGCGACCTCCTCATCTCGCTCGCGCGGCTCGC GCTCCGCGGCCCCGGACCCCCCGCGGCGCCTCGGCGGTGGTTCGCGAGTGTCTCTTCTGC CTCGCCTCTCGCCTCGGGTGGTCCGCCCCGCGGCGGAGGCGGTCGGGGGAACGGTGATGG TGACGGCGGTGGTGGTGGCGACGGCTGGAAGCGCCCGCGCGCTTCCCAGGGAGCGGGTGT GGTGGAGGAAGCGGCAGCGCAGGGAGCCGATGTCATCGTCCTTGACGTTGGGGGAATGTC GTGTGGTGGATGCGCAGCAAGCGTGAAACGTATTCTGGAGAGTGAGCCCCAGGTACGGTC AGCAACTGTTAACCTTGCCACTGAGATGGCAGTCGTCTGGGCAGTGCCCGAGGATAGTGT TGTTCAGGATTGGAAGGAGCAGCTGGGTGAGAAGCTTGCCAATCAGTTGACGACATGTGG CTATAAATCCAATCTTCGAGATTCTTCAAAGGTTGGTTCACAAACAGTTTTCGAAAGAAA GATGCAAGACAAACTTGAACAGCTGAAACAAAGTGGTAGAGAACTTGCTGTATCATGGGC ATTATGTGCGGTTTGCCTTGTGGGACACATTTCTCACCTTTTTGGAGTTAATATGCCACT GATGCACGTCATTCATTCCACTGGATTTCATTTGTCTCTGTCAATATTTACATTTGTCGG TCCTGGTCGAAGACTAATACTTGATGGCCTAAAGAGTCTGTTGAAGGGGTCTCCGAACAT GAATACGCTGGTTGGTTTAGGTGCTTTGTCATCCTTTGCAGTCAGCTCAATTGCAGCCTT CATTCCGAAGCTGGGGTGGAAGACATTTTTTGAGGAACCAGTTATGTTGATAGCTTTTGT TCTTCTAGGGAAGAATCTGGAGCAGAGGGCAAAACTTAAAGCTACCAGTGATATGACTGG ACTGCTTAGTATTCTTCCATCTAAAGCACGCCTAATGGTGGATAATGATGCTGAGAAATC ATCATTGATTGAAGTCCCATGTGATACTCTAGCTGTTGGGGACTATGTTGTTGTGCTACC TGGGGATCACATCCCAGCAGACGGTATTGTGAAAGCTGGAAGGAGTACAGTTGATGAATC AAGTTTGACAGGTGAACCTATGCCTGTAACAAAGATAACAGGGGCAGAAGTATCAGCAGG AAGTATTAACTTGAATGGTAAACTCACTGTTGAAGTTAGAAGACCTGGTGGTGAGACTGT CATGTCTGACATACTTCACTTAGTTGAAGAAGCCCAGACAAGGGCGGCCCCTGTTCAACG ATTGGCTGATCATTACACCTTTATCCTGCAACCATCTCAACCATCTCCGTGGGATTGGAA TAGTACATTTATCATGGTCAACATCAATCCATGGGTTCTGCAGAGCTTTTTTACTTCTGT AGAGATTTTTGATAGACCAAGTGAATATGGGTGATTGGTTACTTCATCTAATTGTTTTTT ACCCTTTGGTATGGTTAATATTTAAAATCTTCTTCCTCTCTTCAAGCACTCAGTGCATTC CATGTTATGTTAATTTCCCGTTAGTGGAAATATTGGTTCTGTTATTGTTTTAGTACTACT TCCATATGTTGGTGCTTGTGGAATTTATTTGATTATGTACTGTTTTTTGGGCATCACCGA TGGTCGATGGATCATGGCTGCTTTGGTGGTGTTTCTGGATGGGTTTAGTAACAGTCTTAG AGATCCTTTCTTTGTCACATCATTGTTGTGGCCTAAATTAGTAATAGTTTTACTCTATGT TTCAGTGTCAATTTTATTGTTAACACAGGTTGCAGGGAACTTTACATATGGAGTCATGGC ACTTTCTGCTGCTACTTACATGTTCTGGAGTATTTTGGGTTCTCAACTTGTACCTGCTGC TATCCAACATGGAGGTGCAATGTCTTTGGCATTACAACTTTCTTGCAGTGTTCTGGTGTA ATTGCTTGTCCTTGTGCTCTTGGGCTTGCCACTCCCACTGCTGTACTGGTTGGCACTTCA TTAGGTGCAACAAGAGGACTTCTTTTACGTGGTGGGGATGTTTTGGAGAAGTTCTCTGAT GTTGATGCCGTTGTGTTTGACAAGACTGGAACTTTAACAATTGGTAGACCTGTGATAACT AAAGTAATACCTTCTAGAGGCATGGGCGATGCGAATACAAAGGATTTGGGGGCCAACCAG TGGGCAGAGGCTGACATTCTGAGTTTTGCTGCTGGAGTGGAATCAAATACAAACCACCCG CTTGGAAAAGCCATCATGGAAGCTGCAGGGGCTGCCAACTGCGTCATTATGAAGGCAAAT GATGGATCCTTCATGGAAGAACCAGGATCTGGTGCTGTGGCTACCATTGGTGAGAAGCAG GTTTCTGTTGGAACATTAGATTGGATTAGAAGGCATGGGGTCATTCACAACCCCTTCCCA GAAGCAGAGCATTTTGGCCAGTCTGTTGCATATGTAGCAGTGAATGGTGCTCTGGCTGGT CTTATTTGTTTTGAGGATAAGCTCAGGGGAGATTCTCGTCAAGTTATCGAGACACTATCT AAACAAGGAATTAGTGTATATATGTTATCTGGGGACAAGGAAAGTGCTGCTATGAATGTG GCTTCAGTTGTCGGTATCCAGGCAGACAAGGTTCTTGCTGAAGTTAAACCACATGAGAAA AAGAAGTTCATATCTGAACTCCAGAAAGAGCACAAGGTAGTCGCCATGGTTGGTGACGGC ATTAATGATGCCGCAGCACTAGCTTCAGCTGATGTTGGAATCGCAATGGGTGGAGGTGTT GGGGCAGCTAGTGATGTATCTTCAGTTGTACTTATGGGCAACAGGTTATCCCAGCTTATC GATGCTTTAGAGTTGAGTAAAGAGACCATGAAGACGGTGAAGCAAAATCTTTGGTGGGCT TTCCTGTATAACATTGTTGGACTACCCATTGCTGCTGGAGCATTGCTTCCAGCTACGGGG ACGATACTGACACCATCAATAGCTGGAGCTCTGATGGGTTTTAGTTCGGTCGGTGTGATG GCCAACTCGTTGCTTTTGAGGGTGAGGCTGAGCTCAAGGCGGAAGCGAGAACCACTGAAA GCCATCTCTGATGAGGTTGAGAAAAATTACTCATCGAAATGGAGTACCTGAGTAGTTCGG ATCTTAGACCATGTTCACGTTCACTCATTCATATGATTTGGACACACGCATCAAAGGCAG TTGTCAGTTGAACAAATGAAACAGATGTAGTATGCAATTGCTGAGGTCAGTCAGTTCCTG TGGTTTGGTAGATCTTCATGGTGTGCTATAATATAATACCCCCTCTATTCCAATTTATAA ATTTTTTGACTTTTTTTT