Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d052763_T007
CDS Infomation

cds chromosome:B73_RefGen_v4:4:199989861:199997537:-1 gene:Zm00001d052763 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative ACT-domain containing protein kinase family protein

Sequence

ATGGCTCCGCCGGCACGGCCGCCACGTGCTGGGGAGGACTTGGAGGAGGGCACAGGCGAG
AGCTCCCCACCTCCTCGGTCGCCACGTGCGTCCAACCCCGACTGCCACGAGGTGCAGAGG
AAGATCTGCGAGCGCCTCCGCCAGACGGGGCGGCACGACCGTACGCTCGCCGACCCCACC
TTCAACGCCCGCTTCGCCCGCCACCTCGAGAGGTTGCCGCGGAGGTACCTACTCGACCTC
GACCTGGACGACAAGCTCGAGGATGTCTTGCTGCACTGGGGGATTCTCGACGAGTGCGCC
GACCCCAATAAGCGACCCGTCTTTCGCGCGCGGTTCATAAAGTATAAGACAGTTCCTAGG
GAGGATGACGGCATTGGTCATGATCAAGATCACGAGGAGCCGTGTCAAAAGTTGTTGGAG
GACCTCAGTTTGGAAAGAAGAAAGATCGCGGACAGAAATGATTCCCTGTCTATCTCCTCT
AGGGGCGATTTGAAAACTGTCCTCCTTCATGAGATCATTTTCTCCTCCATCGACAAGCCC
AAGCTCCTAAGTCGGCTAACTGCGTTGCTCTCTGAGGTTGGACTGAATATCCAGGAAGCT
CATGTGTACTCCACGAAGGATGGTTTTTGTTTGGATGTTTTTGTTGTTGATGGCTGGAAG
ACAGAGGAGACTGATGAGCTGATCGCGGCGATTAAGGAGACATTAACACAAAAAAATGCA
TCACCATCTAATTCAACAAATTCTTCGACGCCGGAGAAAATAGTTGACCTACAACAACAG
GTTGGAGATTATGAAATTGACTTAAGCATGCTAACTAGGGGGGACAAGATCGCATCTGGA
TCATCCGCAGACTTATATCGAGGAACTTATAAAGGCCATGATGTTGCTATCAAGTGTCTC
AGATCTCTATATCTCAACAATCCTTCAGAAGTTGAGTTTCTGCAGGAAGTACTTATTCTA
AGTGGTGTTAATCATGAAAATATTCTGCAATTTTATGGGGCATGCACAAAACATCCAAAC
TATTGCATTGTAACAGAATACATGCCTGGAGGGAATATATATGACTTTCTTCACAAGCAA
AATAACTTCTTGGACCTCCATAAAATTCTAAGATTTGCTATCGATATCTCAAAAGGAATG
GATTATCTGCACCAGAATAACATTATACACAGAGATTTGAAGTCTGCAAATCTTCTGCTA
GGCCATGACCAAGTTGTTAAGATCGCAGACTTTGGTGTGGCGCGACATGGAAGTCAGCAG
GGGCAGATGACTGCTGAAACTGGAACCTACCGATGGATGGCACCAGAGGTATGGTTGAGA
TCTTGTTTCTTTCCCTCGTGGAGAAGTGGTTTGTCTTTCATTAGTATAGTATAG

Peptide Sequence

PEP ID

Zm00001d052763_P007
PEP Infomation

pep chromosome:B73_RefGen_v4:4:199989861:199997537:-1 gene:Zm00001d052763 transcript:Zm00001d052763_T007 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative ACT-domain containing protein kinase family protein

Sequence

MAPPARPPRAGEDLEEGTGESSPPPRSPRASNPDCHEVQRKICERLRQTGRHDRTLADPT
FNARFARHLERLPRRYLLDLDLDDKLEDVLLHWGILDECADPNKRPVFRARFIKYKTVPR
EDDGIGHDQDHEEPCQKLLEDLSLERRKIADRNDSLSISSRGDLKTVLLHEIIFSSIDKP
KLLSRLTALLSEVGLNIQEAHVYSTKDGFCLDVFVVDGWKTEETDELIAAIKETLTQKNA
SPSNSTNSSTPEKIVDLQQQVGDYEIDLSMLTRGDKIASGSSADLYRGTYKGHDVAIKCL
RSLYLNNPSEVEFLQEVLILSGVNHENILQFYGACTKHPNYCIVTEYMPGGNIYDFLHKQ
NNFLDLHKILRFAIDISKGMDYLHQNNIIHRDLKSANLLLGHDQVVKIADFGVARHGSQQ
GQMTAETGTYRWMAPEVWLRSCFFPSWRSGLSFISIV

Transcript Sequence

Transcript ID

Zm00001d052763_T007
Transcript Infomation

cdna chromosome:B73_RefGen_v4:4:199989861:199997537:-1 gene:Zm00001d052763 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative ACT-domain containing protein kinase family protein

Sequence

ATGGCCATCGTCGTCGTCGTCTTCCACAATCCAATCGGTGCTCACCCCGCCGGCCGGCCG
GCCGGAGCACCTCTATAAATACTAGCCTAGGGTACCCCGGACCGGCCGGCCGGCCGGCTG
CACGCACGCATCCTCCGCCTGCCGCACCCGCCACCGCAAGAAGAGGGTTCAAAATACTCA
AGATGGCTCCGCCGGCACGGCCGCCACGTGCTGGGGAGGACTTGGAGGAGGGCACAGGCG
AGAGCTCCCCACCTCCTCGGTCGCCACGTGCGTCCAACCCCGACTGCCACGAGGTGCAGA
GGAAGATCTGCGAGCGCCTCCGCCAGACGGGGCGGCACGACCGTACGCTCGCCGACCCCA
CCTTCAACGCCCGCTTCGCCCGCCACCTCGAGAGGTTGCCGCGGAGGTACCTACTCGACC
TCGACCTGGACGACAAGCTCGAGGATGTCTTGCTGCACTGGGGGATTCTCGACGAGTGCG
CCGACCCCAATAAGCGACCCGTCTTTCGCGCGCGGTTCATAAAGTATAAGACAGTTCCTA
GGGAGGATGACGGCATTGGTCATGATCAAGATCACGAGGAGCCGTGTCAAAAGTTGTTGG
AGGACCTCAGTTTGGAAAGAAGAAAGATCGCGGACAGAAATGATTCCCTGTCTATCTCCT
CTAGGGGCGATTTGAAAACTGTCCTCCTTCATGAGATCATTTTCTCCTCCATCGACAAGC
CCAAGCTCCTAAGTCGGCTAACTGCGTTGCTCTCTGAGGTTGGACTGAATATCCAGGAAG
CTCATGTGTACTCCACGAAGGATGGTTTTTGTTTGGATGTTTTTGTTGTTGATGGCTGGA
AGACAGAGGAGACTGATGAGCTGATCGCGGCGATTAAGGAGACATTAACACAAAAAAATG
CATCACCATCTAATTCAACAAATTCTTCGACGCCGGAGAAAATAGTTGACCTACAACAAC
AGGTTGGAGATTATGAAATTGACTTAAGCATGCTAACTAGGGGGGACAAGATCGCATCTG
GATCATCCGCAGACTTATATCGAGGAACTTATAAAGGCCATGATGTTGCTATCAAGTGTC
TCAGATCTCTATATCTCAACAATCCTTCAGAAGTTGAGTTTCTGCAGGAAGTACTTATTC
TAAGTGGTGTTAATCATGAAAATATTCTGCAATTTTATGGGGCATGCACAAAACATCCAA
ACTATTGCATTGTAACAGAATACATGCCTGGAGGGAATATATATGACTTTCTTCACAAGC
AAAATAACTTCTTGGACCTCCATAAAATTCTAAGATTTGCTATCGATATCTCAAAAGGAA
TGGATTATCTGCACCAGAATAACATTATACACAGAGATTTGAAGTCTGCAAATCTTCTGC
TAGGCCATGACCAAGTTGTTAAGATCGCAGACTTTGGTGTGGCGCGACATGGAAGTCAGC
AGGGGCAGATGACTGCTGAAACTGGAACCTACCGATGGATGGCACCAGAGGTATGGTTGA
GATCTTGTTTCTTTCCCTCGTGGAGAAGTGGTTTGTCTTTCATTAGTATAGTATAGTATT
TCATTCTTTTCATTCTGACTTGTAGTTTATTGTTCATCTAACAGAAACTTCTAATTGTTA
CTAAATGTGGCAAAAATTTTATCCAATCTTTTATATTTAGTTAATATTCTATATGCAAGG
TTAGCAAGTATTGATTCAAGTGTTGCATGTGAACTTGAGTTTCCTCCGGACTTGTTTGGT
GACAAGGAAACCCCTCCAATCCCCCTCAATTCCCTTGTCACCAAAGGAGCTGTTCAAGAG
AATTCTTTTCATCTCCAAGGTTTGGTCTAGATGAATAGAATGATTTAGCATGACATTTTG
TTAGACTCTTTGACTCTTTAGAAGACTATTTTAAACTCCTTGAAATTCAGGGCCCAACCC
GGCAAATTGGTTTACATGTACGCTTTAATTCATTTTTATTTGTTCCACGGTTTAACATTC
AGCAGATGTGTTTCCATTCTTTTCACTGAAACAAACAGGCAAACAAATGAAGTTTATTTT
GTATCTCTATGTCTCAGGTTCAGGAAGTTCTGTTCCCAAAGATAACAAATCCTCTTACCC
CCCTTAAAAAAAGTTTCTACCTTGAACATTGTATTTGAATAGCGTGCTCATAAGAGTCGG
TTGTCTTGACAGATAATTAATCATAAGCCGTATGACCACAAAGCGGATGTATTCAGCTTT
GCCATTGTTCTTTGGGAGCTGGCAACTTCAATGGTCCCATATGACAACATGACACCCTTG
CAAGCTGCATTAGGAGTAAGACAGGGATTGCGCTTGGACATTCCGGGCAGCGTGCACCCA
AGATTGACCAAGCTGATTCGACAGTGCTGGAACGAAGATCCTGATGCGCGTCTGACTTTT
GCAGAGATTACTAAAGAACTCCAAGATAGTCTACACCATATCGAGGCACCCAAGGGAGCC
AGCCGTCGATCTAGAGCAAAGATGCAGAAGAAATAAGAGGGCAAGGTTTCCTACTTTTTT
TTGGGTGTGTTACACTAGTTGCAGTATGAGTGTTTAAGGTGTATGTCGCGGTTATAAATA
TTTTAAGGCCAAGGAAGTG