Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d052751_T091
CDS Infomation

cds chromosome:B73_RefGen_v4:4:199806637:199810937:1 gene:Zm00001d052751 gene_biotype:protein_coding transcript_biotype:protein_coding description:ENHANCER OF AG-4 protein 2
Sequence

ATGCCGGCATGCTCTGAGGTGAAGAAACTTCATAGTACTTCTAAACCATTGCAAGTAACA
TCTGGGAAATCCCATTCCCGAAACTATCCTGCTTCAGAAAAGATCGCCTTGGTGCCCAAG
TCAGAAGAAACAAAGGCTAAATCTAAACCAGCTACATCTGTTGAGCATAAGGTGGCCACC
ACTTTGTCAACTGAACGGACTGGGAAGCGGGACCACCTGAAAGAGGAAAGATCAAGTTCT
GTTGATAAAGCAGCTTATTCTGAACCTAACCCTGACTCGGCCAAGTCAATAAAACATCTT
ATTGCAGCTGCCCAAGCAAGGAGGAACCTTATGGCTTCTGCTCTTGCAAAATTTGATGGG
TCTTCGACTGATAATAGTGCTATTACCTCTACATCATATGGTTTGCCAAGACTAAGCCCT
AGTCCTGTTTTTCGCATTCCATCCCCACCTAGAATTGCTTTTCCTGAGAGTCCTGGTCAA
CGTATTCTGAAAAGCCCAATGGAGCTTGATAATGGTCATGGAAAGAGTCCCAAATCTAGG
CAGGCCAGCGGTTCACCTAGTGGTGGTTCTGATGCAGCAATTGCTCGTGATGCTTTGGAG
GGAATGATAGAGACTTTATCAAGGACAAAGGATAGTATAGGCCGTGCAACACGCCATGCA
ATTGAGTGCTCTAAATATGGCATTGCTGGAGAGATTGTCGAGCTTCTCATACAGAAATTG
GAGAACGAGCATAATTTGCATCGCAGAATTGACCTCCTTTTTCTTGTGGATTCCATAACA
CAATGTTCCCATTCTCATAGAGGAGTTGCCGGGGCTTCATATGTTCCCACTGTTCAAGCG
GCATTGCCTCGTCTTTTCGGTGCTGCTGCTCCACCTGGAGCTGGTGCTCGTGAAAACCGG
CGCCAGTGCCTTAAAGTTTTAAGATTGTGGCTTGAGAGAAAGATTATGCCAGAAGACATA
CTCCGAAAGTACATGGGTGACATTGAGGTGCCAAATGATGATACTAGCACTAGTTTAATG
TTAAAGCGACCATCCCGTTCTGAACGTTCTGTAGATGATCCTATTAGGGAGATGGATGAC
ATGCTTGTTGATGAATATGGAAGCAATGCAACTTTTGAGCTTTCTGGAATTTTATCATCA
AAAGTGTTTGAAGATGATGAAGACTTCCCTCAAAACAATGGGTCATCATCATTTGTTTCA
CGGCCTGTTGAAGGTGGTGTCATACATGAAACTGAAGATAATATTGCTCCAGCATCTGTT
GAGGAACACATTATTAGAGTAGAACATGTAGCTACTGATGCTGCTATGGAAGATGCTTTA
GAGTTACTTGGCAACAACCAACAGACTCATGGAGCTGTCATTATTGAACATGACTCTAGT
CAAGGTCCAGGTTCAGAGCAGGCATTGATCGCCCAGAATGAGCTTCCCCCTCTACCTGAT
GGCCCTCCACCACTTCCATCAGATTCACCACCACCTCCACCTCCTTTGCCTCCTTCACCA
CCACCCGCTACACCGCCACCACCACCTCCACTCTCTCCAGCTTCACCACTTCCGCCACCA
CCTCCCCCACTACCATCTGGACCACCTCCTCAGCCTGCACCACCACCTCTGCCAACCCAG
GACCCACCTCTTCCTTCTATTCCGCTGCCTGTTTCTTCATCTCCGTTGTCATTGGGTTAT
CAGCCTCCAGCGCCAGAGTACTTCATGACGCCCAATGGTAATCAATTGGCCCAGATGACA
GTAAACACATCAATTCAAGCTATTGGAAATACAACAACCTTCATTCCTGGTGGACCAGTT
AATGGACAAGCTGCAGTTAATTTTGTTACTTCAATGCCGGCAGAATTTGGAAATACTAGC
GTATTTATGGCGCAAGCTTCTAATGGTAATTACCAGTTTCGGCCAACTGGTGTACCTTTT
CAGCAAGGGAATTTCAGTGCCTTTCCATCTGCACAAACACCTCCAGTTCATCCCCATTCT
CGTATGGCACACATGAATCCCATGGGCCAACAAGCTGTTGCACCTCCACACAATCCTTAT
GCTGCACAGTCCTTTCCAAACAGTCAGAGCCATTATCCATCTGAAGAACATTGGCGGATG
GCATCTGGTAACTTCAGTCCAGATGACCAGCATAATTGGATAGCAAGTGGCAGATCATTA
CCTTGCTCAGAAGGGCCATTTGTGCATGATGGATATTCAAGATCAAACATTGACAGATCT
TCAATGAATCCTATGAATCATCAACATACTGTTCTGAATCATTTGCCATCTGGAGCACCA
CTACCAGGCCATATTTCTCAGATGCTACCAGCCAGGTCTGATATGCACACTCTTAATTGC
TGGAGGCCCTCTTGA

Peptide Sequence

PEP ID

Zm00001d052751_P091
PEP Infomation

pep chromosome:B73_RefGen_v4:4:199806637:199810937:1 gene:Zm00001d052751 transcript:Zm00001d052751_T091 gene_biotype:protein_coding transcript_biotype:protein_coding description:ENHANCER OF AG-4 protein 2
Sequence

MPACSEVKKLHSTSKPLQVTSGKSHSRNYPASEKIALVPKSEETKAKSKPATSVEHKVAT
TLSTERTGKRDHLKEERSSSVDKAAYSEPNPDSAKSIKHLIAAAQARRNLMASALAKFDG
SSTDNSAITSTSYGLPRLSPSPVFRIPSPPRIAFPESPGQRILKSPMELDNGHGKSPKSR
QASGSPSGGSDAAIARDALEGMIETLSRTKDSIGRATRHAIECSKYGIAGEIVELLIQKL
ENEHNLHRRIDLLFLVDSITQCSHSHRGVAGASYVPTVQAALPRLFGAAAPPGAGARENR
RQCLKVLRLWLERKIMPEDILRKYMGDIEVPNDDTSTSLMLKRPSRSERSVDDPIREMDD
MLVDEYGSNATFELSGILSSKVFEDDEDFPQNNGSSSFVSRPVEGGVIHETEDNIAPASV
EEHIIRVEHVATDAAMEDALELLGNNQQTHGAVIIEHDSSQGPGSEQALIAQNELPPLPD
GPPPLPSDSPPPPPPLPPSPPPATPPPPPPLSPASPLPPPPPPLPSGPPPQPAPPPLPTQ
DPPLPSIPLPVSSSPLSLGYQPPAPEYFMTPNGNQLAQMTVNTSIQAIGNTTTFIPGGPV
NGQAAVNFVTSMPAEFGNTSVFMAQASNGNYQFRPTGVPFQQGNFSAFPSAQTPPVHPHS
RMAHMNPMGQQAVAPPHNPYAAQSFPNSQSHYPSEEHWRMASGNFSPDDQHNWIASGRSL
PCSEGPFVHDGYSRSNIDRSSMNPMNHQHTVLNHLPSGAPLPGHISQMLPARSDMHTLNC
WRPS

Transcript Sequence

Transcript ID

Zm00001d052751_T091
Transcript Infomation

cdna chromosome:B73_RefGen_v4:4:199806637:199810937:1 gene:Zm00001d052751 gene_biotype:protein_coding transcript_biotype:protein_coding description:ENHANCER OF AG-4 protein 2
Sequence

CTCAAGTAAAAATGCCGGCATGCTCTGAGGTGAAGAAACTTCATAGTACTTCTAAACCAT
TGCAAGTAACATCTGGGAAATCCCATTCCCGAAACTATCCTGCTTCAGAAAAGATCGCCT
TGGTGCCCAAGTCAGAAGAAACAAAGGCTAAATCTAAACCAGCTACATCTGTTGAGCATA
AGGTGGCCACCACTTTGTCAACTGAACGGACTGGGAAGCGGGACCACCTGAAAGAGGAAA
GATCAAGTTCTGTTGATAAAGCAGCTTATTCTGAACCTAACCCTGACTCGGCCAAGTCAA
TAAAACATCTTATTGCAGCTGCCCAAGCAAGGAGGAACCTTATGGCTTCTGCTCTTGCAA
AATTTGATGGGTCTTCGACTGATAATAGTGCTATTACCTCTACATCATATGGTTTGCCAA
GACTAAGCCCTAGTCCTGTTTTTCGCATTCCATCCCCACCTAGAATTGCTTTTCCTGAGA
GTCCTGGTCAACGTATTCTGAAAAGCCCAATGGAGCTTGATAATGGTCATGGAAAGAGTC
CCAAATCTAGGCAGGCCAGCGGTTCACCTAGTGGTGGTTCTGATGCAGCAATTGCTCGTG
ATGCTTTGGAGGGAATGATAGAGACTTTATCAAGGACAAAGGATAGTATAGGCCGTGCAA
CACGCCATGCAATTGAGTGCTCTAAATATGGCATTGCTGGAGAGATTGTCGAGCTTCTCA
TACAGAAATTGGAGAACGAGCATAATTTGCATCGCAGAATTGACCTCCTTTTTCTTGTGG
ATTCCATAACACAATGTTCCCATTCTCATAGAGGAGTTGCCGGGGCTTCATATGTTCCCA
CTGTTCAAGCGGCATTGCCTCGTCTTTTCGGTGCTGCTGCTCCACCTGGAGCTGGTGCTC
GTGAAAACCGGCGCCAGTGCCTTAAAGTTTTAAGATTGTGGCTTGAGAGAAAGATTATGC
CAGAAGACATACTCCGAAAGTACATGGGTGACATTGAGGTGCCAAATGATGATACTAGCA
CTAGTTTAATGTTAAAGCGACCATCCCGTTCTGAACGTTCTGTAGATGATCCTATTAGGG
AGATGGATGACATGCTTGTTGATGAATATGGAAGCAATGCAACTTTTGAGCTTTCTGGAA
TTTTATCATCAAAAGTGTTTGAAGATGATGAAGACTTCCCTCAAAACAATGGGTCATCAT
CATTTGTTTCACGGCCTGTTGAAGGTGGTGTCATACATGAAACTGAAGATAATATTGCTC
CAGCATCTGTTGAGGAACACATTATTAGAGTAGAACATGTAGCTACTGATGCTGCTATGG
AAGATGCTTTAGAGTTACTTGGCAACAACCAACAGACTCATGGAGCTGTCATTATTGAAC
ATGACTCTAGTCAAGGTCCAGGTTCAGAGCAGGCATTGATCGCCCAGAATGAGCTTCCCC
CTCTACCTGATGGCCCTCCACCACTTCCATCAGATTCACCACCACCTCCACCTCCTTTGC
CTCCTTCACCACCACCCGCTACACCGCCACCACCACCTCCACTCTCTCCAGCTTCACCAC
TTCCGCCACCACCTCCCCCACTACCATCTGGACCACCTCCTCAGCCTGCACCACCACCTC
TGCCAACCCAGGACCCACCTCTTCCTTCTATTCCGCTGCCTGTTTCTTCATCTCCGTTGT
CATTGGGTTATCAGCCTCCAGCGCCAGAGTACTTCATGACGCCCAATGGTAATCAATTGG
CCCAGATGACAGTAAACACATCAATTCAAGCTATTGGAAATACAACAACCTTCATTCCTG
GTGGACCAGTTAATGGACAAGCTGCAGTTAATTTTGTTACTTCAATGCCGGCAGAATTTG
GAAATACTAGCGTATTTATGGCGCAAGCTTCTAATGGTAATTACCAGTTTCGGCCAACTG
GTGTACCTTTTCAGCAAGGGAATTTCAGTGCCTTTCCATCTGCACAAACACCTCCAGTTC
ATCCCCATTCTCGTATGGCACACATGAATCCCATGGGCCAACAAGCTGTTGCACCTCCAC
ACAATCCTTATGCTGCACAGTCCTTTCCAAACAGTCAGAGCCATTATCCATCTGAAGAAC
ATTGGCGGATGGCATCTGGTAACTTCAGTCCAGATGACCAGCATAATTGGATAGCAAGTG
GCAGATCATTACCTTGCTCAGAAGGGCCATTTGTGCATGATGGATATTCAAGATCAAACA
TTGACAGATCTTCAATGAATCCTATGAATCATCAACATACTGTTCTGAATCATTTGCCAT
CTGGAGCACCACTACCAGGCCATATTTCTCAGATGCTACCAGCCAGGTCTGATATGCACA
CTCTTAATTGCTGGAGGCCCTCTTGATAGAGTTGTAAACTGAACTTCTTGTTTGTGATTT
TGACATGGAAAGCTCAGGGCATTGGAGGCAATTTGAATTGAGTTCAACAACTGGTGGCTG
TTAGTCTGAGATGGAGATGCACTTGCCAGGGTTTAACGATGAGATCTGTCATAGTATGTG
GAATGGACATTTTACAATGTAACTAGTCCTGACAACAGTATCCAGCAGACAATCTCTCTT
AGTGTGAGCTCATCTTTTCACATGACGCAAATGTCCTCCAGTTTTTTAGATGTTGCTTCC
AGTATGGATCAGGACAGCGAACTGTTCCTATGCTATGGTAGTAAATATCTTGTGCAGATA
CATTAATTATAAATAGAGGTCTGGTAGTAAATACCAGGAACTGGT