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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d052750_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:4:199667552:199671247:1 gene:Zm00001d052750 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ABI3-VP1-transcription factor 47 description:B3 domain-containing transcription factor LEC2
Sequence

ATGGGCCAGATGGGAGGACCCGACGGCGACGGCGACGGCGGCGCGGGCCCGCACCACCAG
TACCACTACCAGGCGCTTCTCGCCGCCGTGCAGAACCCCAGCCAGGGCCTGCACCCCTTT
CCCCTCCCCTTCCACGTGCCTCTGCACGCAGGAGCGGGAGCACCCGCCGCCGGACCAGGA
CCTGGAGCTGATGCTGATGCCTCCACACACAATGCCAATGCCGCTCACCACTCTCAACCT
CCAAGAGGTTTCACCGATTGGAGCGCGTCCAACAGTGCCTTCGCCGCCGTTGCCTCACAG
CCCGCACCTGCTACCACCAATACACCCTTCCATTACAACCTCTCCCAGTCTTATGCCCTA
TGGACCCATTACATGCTTAACAAGAATGTATCCTACTCTACTTACCCTACACCACATGAG
GAGCATCCCCACCCATTGCGCCATACCCACATCCAGGAGAATCCCCACCCATTGCGCCAT
ACCCACATCCCGGATAAGGATTCAGGTTGTGCATCTAGCCTTGGATTTGACTCTTTCACT
ACAATGTCCCTTGGACCAAATATTTGTTCCCACATGACGCCCATGGAAGGATCTATATCT
GCCAAAGAACCCGAGAATTCAGAGGATTTGCCTGCAATAGTTAGGAGCAGTGATGAAATG
GACACTAGAAACAGTGGCAAAGTTCATCGTGACACAGTTGGCACTCTTCCTGAGTCGAAG
CAGAGCCATGAAAGTTGTGCTTCCGTGAATAATAAGTTCAACTCTGGAGAGTACCAAGTC
ATTTTGCGCAAGGAGTTGACAAAGAGTGATGTCGCAAATTCCGGACGAATTGTGCTTCCC
AAGAAGGATGCTGAGGCTGGTCTTCCACCATTGGTGCAAGGGGATCCTCTGATACTGCAG
ATGGATGACATGGTGCTTCCAATTATATGGAAATTTAAGTATAGATTTTGGCCAAACAAC
AAAAGCAGAATGTATATCTTGGAAGCTGCAGGTGAATTCGTGAAGACACATGGCCTTCAG
GCAGGGGATGCGCTCATTATCTACAAAAACTCCGTGCCTGGCAAATTTATTATCCGTGGG
GAGAAGTCCATTCAGCAGACAAACCCCTAG

Peptide Sequence

PEP ID

Zm00001d052750_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:4:199667552:199671247:1 gene:Zm00001d052750 transcript:Zm00001d052750_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ABI3-VP1-transcription factor 47 description:B3 domain-containing transcription factor LEC2
Sequence

MGQMGGPDGDGDGGAGPHHQYHYQALLAAVQNPSQGLHPFPLPFHVPLHAGAGAPAAGPG
PGADADASTHNANAAHHSQPPRGFTDWSASNSAFAAVASQPAPATTNTPFHYNLSQSYAL
WTHYMLNKNVSYSTYPTPHEEHPHPLRHTHIQENPHPLRHTHIPDKDSGCASSLGFDSFT
TMSLGPNICSHMTPMEGSISAKEPENSEDLPAIVRSSDEMDTRNSGKVHRDTVGTLPESK
QSHESCASVNNKFNSGEYQVILRKELTKSDVANSGRIVLPKKDAEAGLPPLVQGDPLILQ
MDDMVLPIIWKFKYRFWPNNKSRMYILEAAGEFVKTHGLQAGDALIIYKNSVPGKFIIRG
EKSIQQTNP

Transcript Sequence

Transcript ID

Zm00001d052750_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:4:199667552:199671247:1 gene:Zm00001d052750 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ABI3-VP1-transcription factor 47 description:B3 domain-containing transcription factor LEC2
Sequence

GCCCTTGGCCCTTGGCCTCCTTTCGTCGAGAGAGAGAGAGCTGTGCTGGCTGCTGCTGCC
CCGGGTCCGTCGGGACGGGTAGATGAGGAGGAAGAGAACAGCTCGTGACTGACTGACTCC
CTCCCTCAGCGTGAGTGGGTTGCGGACGACCACATCCATCCGTTCCCACCATTCCCTTCT
CCCACCTCGCCTCCTCCCCTTGCCCTTGCCCTTCCACAGCCGGAATCAGGGGGTAATGGG
CCAGATGGGAGGACCCGACGGCGACGGCGACGGCGGCGCGGGCCCGCACCACCAGTACCA
CTACCAGGCGCTTCTCGCCGCCGTGCAGAACCCCAGCCAGGGCCTGCACCCCTTTCCCCT
CCCCTTCCACGTGCCTCTGCACGCAGGAGCGGGAGCACCCGCCGCCGGACCAGGACCTGG
AGCTGATGCTGATGCCTCCACACACAATGCCAATGCCGCTCACCACTCTCAACCTCCAAG
AGGTTTCACCGATTGGAGCGCGTCCAACAGTGCCTTCGCCGCCGTTGCCTCACAGCCCGC
ACCTGCTACCACCAATACACCCTTCCATTACAACCTCTCCCAGTCTTATGCCCTATGGAC
CCATTACATGCTTAACAAGAATGTATCCTACTCTACTTACCCTACACCACATGAGGAGCA
TCCCCACCCATTGCGCCATACCCACATCCAGGAGAATCCCCACCCATTGCGCCATACCCA
CATCCCGGATAAGGATTCAGGTTGTGCATCTAGCCTTGGATTTGACTCTTTCACTACAAT
GTCCCTTGGACCAAATATTTGTTCCCACATGACGCCCATGGAAGGATCTATATCTGCCAA
AGAACCCGAGAATTCAGAGGATTTGCCTGCAATAGTTAGGAGCAGTGATGAAATGGACAC
TAGAAACAGTGGCAAAGTTCATCGTGACACAGTTGGCACTCTTCCTGAGTCGAAGCAGAG
CCATGAAAGTTGTGCTTCCGTGAATAATAAGTTCAACTCTGGAGAGTACCAAGTCATTTT
GCGCAAGGAGTTGACAAAGAGTGATGTCGCAAATTCCGGACGAATTGTGCTTCCCAAGAA
GGATGCTGAGGCTGGTCTTCCACCATTGGTGCAAGGGGATCCTCTGATACTGCAGATGGA
TGACATGGTGCTTCCAATTATATGGAAATTTAAGTATAGATTTTGGCCAAACAACAAAAG
CAGAATGTATATCTTGGAAGCTGCAGGTGAATTCGTGAAGACACATGGCCTTCAGGCAGG
GGATGCGCTCATTATCTACAAAAACTCCGTGCCTGGCAAATTTATTATCCGTGGGGAGAA
GTCCATTCAGCAGACAAACCCCTAGACACAATTTGATGTGACTGTGCACCATCAGATATG
GCGTCCGAGGATACACCATATGTTCACGTTCCAGTTGTTATCGACTTTTCTAATGTCTCA
CCGTCACACTGAGATAAGTCGAAAAAGGAGATACACCGTGTGGATGGAGAAAAGGAGAAG
AAATTTTGGGAGACATTGGAAGTGCTGCCAGTGAGCCTACGTCTAAGCTCAGAACAAATG
GTTTATGTTTTTTCCCCTAATTCGGTCGTATTTGGATGCTTGAGTCCTGCATTGCATGAT
GAAGAACATTCTCAGTCTCTCTTTTTTTGTAAATATTTTAATTCAGGATCTATAAGGTAA
AGGAAGTGGTTTGGAAGCAG