Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d052744_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:4:199500941:199503963:-1 gene:Zm00001d052744 gene_biotype:protein_coding transcript_biotype:protein_coding description:Lipopolysaccharide-modifying protein
Sequence	ATGAAGAGCTTGCAGGAGGAGAGGGCGGCGTTGGTGCCGTCGCCGTGGCCCCAGCAACAG AGAAAGGACGGCGGCGAGCATGATCCGGAGCAGCTGATGGATGAGGATGACGGTGACGAT GAGGAGGATCTGCAGGATGAGCAGCACACAAGAACAATTAGGACGTCGACCAAGACGGCG GAAGCATCGTCATCAGCGGAGCGGCGGGTGCCGGCGTGGTGGAGGCTGCGGCGGGCGCAG AAGCTGCTGGTGCCCACCAGAGGTGTTGGCCTGGTCATCGCCGGTCTCCTCGTGCTGGTC TTGCTCCTCGTCGTCGGCGGCGGCGGCGGCGCCAACACCAGTCGTCGTCGCTGGATCCAC CTCGACTATGCATCGTCGTTTCTGCGCGGCGGCGGCTTGAGGCAGCATCAATGGCCTCCT CACCACGTCCCTTCACCCGCAGCCGACCTCGTGCCCATACCCTTCAGCTGCGGCGGCAAC GGCTCGGCATGTCCCCGTCGTCAAACCGCAACATCACCCCCCTCTCCGTCGCCATCATCG TCATCGCCACCAGCAGGCACCAAGTCATCATCGTCCAAGAATAAACAACCCCCTCCTCAG TGCCCGGATTACTTCCGCTTCATCCACTCCGACCTGTCGCCGTGGCGCGAGACGGGGATC ACGCGCGAGGCGGTGGAGCGGGGGCGCCACCGGGCGGCGTTCCGGCTGGTGGTCGTGGAC GGCCGCGCGTACGTGGAGACGTACCACCGCGTGTTCCAGACGCGTGACACCTTCACGCAG TGGGGCATCGCGCAGCTGCTGGCGCGCTACCCCGGACGCGTCCCGGACCTGGACCTCATG TTCAACTGCGAGGACATGCCCGAGGTCAAGGTCAAGCCGTCGGAGGAGTCGTCCGCGCCG CCGCTGTTCCGCTACTGCAAGGACGACTCCACGGTGGACATCGTGTTCCCGGACTGGTCC TTCTGGGGCTGGCCCGAGGTCAACATCCGTCCCTGGGCGCCGCTGCTGGAGGAGATGGCC GCCGAGATGGGTCGCCTGCCGTGGGCGGACCGGGAGCCGTACGCGTACTGGAAGGGCAAC CCCACCGTGTCCGCCGAGCGCGCCGACCTCCGCCGCTGCAACGACTCCTCGTCGTCCGGC GGCACGCGCGTGTTCTGGCAGGACTGGGGCGCCGCCATCCGGGACGGCTTCCGGGACTCC AACCTGGCCAAGCAGTGCCGCTACCGCTACAAGATCTACGTGCGTGGCCGGTCCTGGTCG GTCAGCCTCAAGTACATCCTCGCCTGCGACTCGCCGGTGCTGCTCATCGCCACGCCCTTC AAGGACTTCTTCTCCCGGGGCCTCGTCGCCGGCAGGCACTACTGGCCCATCGACCCCGGA GCCCGCAAGTGCGCCGACATCAACTTCGCCGTCCACGACTGGGGCAACGCGCACCCGGAG CAGGCGCGCCGGATGGCGGAGGAAGGCAGCGGCTTCGCGCGCCACCAGCTCAGCATGGAC TACGTCTACGACTACATGCTGCACCTGCTCACCCAGTACGCCGGCCTGCTCCGCTACAAG CCCACCGTGCCGGAGAACGCCGTAGAGCTGTGCGCCGAGACCGTCGCCTGCCCCGCTGCG CACCACAGCAACAGGAGGGAGTTCGACTTCATGATGCAGTCCAGGGAGAGGTACATCGCC GACTACCAGCCCTGCACGCTGCCGCCGCCCTTTACCGACCGTCACATCAGGGAGATGACG CGAAGAGACCAGGAGGTGCGCGCCAACGTGCACAAGATGATGACCACCGTCACTCCATGA

Peptide Sequence

PEP ID	Zm00001d052744_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:4:199500941:199503963:-1 gene:Zm00001d052744 transcript:Zm00001d052744_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Lipopolysaccharide-modifying protein
Sequence	MKSLQEERAALVPSPWPQQQRKDGGEHDPEQLMDEDDGDDEEDLQDEQHTRTIRTSTKTA EASSSAERRVPAWWRLRRAQKLLVPTRGVGLVIAGLLVLVLLLVVGGGGGANTSRRRWIH LDYASSFLRGGGLRQHQWPPHHVPSPAADLVPIPFSCGGNGSACPRRQTATSPPSPSPSS SSPPAGTKSSSSKNKQPPPQCPDYFRFIHSDLSPWRETGITREAVERGRHRAAFRLVVVD GRAYVETYHRVFQTRDTFTQWGIAQLLARYPGRVPDLDLMFNCEDMPEVKVKPSEESSAP PLFRYCKDDSTVDIVFPDWSFWGWPEVNIRPWAPLLEEMAAEMGRLPWADREPYAYWKGN PTVSAERADLRRCNDSSSSGGTRVFWQDWGAAIRDGFRDSNLAKQCRYRYKIYVRGRSWS VSLKYILACDSPVLLIATPFKDFFSRGLVAGRHYWPIDPGARKCADINFAVHDWGNAHPE QARRMAEEGSGFARHQLSMDYVYDYMLHLLTQYAGLLRYKPTVPENAVELCAETVACPAA HHSNRREFDFMMQSRERYIADYQPCTLPPPFTDRHIREMTRRDQEVRANVHKMMTTVTP

Transcript Sequence

Transcript ID	Zm00001d052744_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:199500941:199503963:-1 gene:Zm00001d052744 gene_biotype:protein_coding transcript_biotype:protein_coding description:Lipopolysaccharide-modifying protein
Sequence	ATTAGAATAGCCAGGGGCCTCGCTCCTCTCCACCACGTACTCCACTCCATCCATCCATCA TCGTCTATCCATGAAGAGCTTGCAGGAGGAGAGGGCGGCGTTGGTGCCGTCGCCGTGGCC CCAGCAACAGAGAAAGGACGGCGGCGAGCATGATCCGGAGCAGCTGATGGATGAGGATGA CGGTGACGATGAGGAGGATCTGCAGGATGAGCAGCACACAAGAACAATTAGGACGTCGAC CAAGACGGCGGAAGCATCGTCATCAGCGGAGCGGCGGGTGCCGGCGTGGTGGAGGCTGCG GCGGGCGCAGAAGCTGCTGGTGCCCACCAGAGGTGTTGGCCTGGTCATCGCCGGTCTCCT CGTGCTGGTCTTGCTCCTCGTCGTCGGCGGCGGCGGCGGCGCCAACACCAGTCGTCGTCG CTGGATCCACCTCGACTATGCATCGTCGTTTCTGCGCGGCGGCGGCTTGAGGCAGCATCA ATGGCCTCCTCACCACGTCCCTTCACCCGCAGCCGACCTCGTGCCCATACCCTTCAGCTG CGGCGGCAACGGCTCGGCATGTCCCCGTCGTCAAACCGCAACATCACCCCCCTCTCCGTC GCCATCATCGTCATCGCCACCAGCAGGCACCAAGTCATCATCGTCCAAGAATAAACAACC CCCTCCTCAGTGCCCGGATTACTTCCGCTTCATCCACTCCGACCTGTCGCCGTGGCGCGA GACGGGGATCACGCGCGAGGCGGTGGAGCGGGGGCGCCACCGGGCGGCGTTCCGGCTGGT GGTCGTGGACGGCCGCGCGTACGTGGAGACGTACCACCGCGTGTTCCAGACGCGTGACAC CTTCACGCAGTGGGGCATCGCGCAGCTGCTGGCGCGCTACCCCGGACGCGTCCCGGACCT GGACCTCATGTTCAACTGCGAGGACATGCCCGAGGTCAAGGTCAAGCCGTCGGAGGAGTC GTCCGCGCCGCCGCTGTTCCGCTACTGCAAGGACGACTCCACGGTGGACATCGTGTTCCC GGACTGGTCCTTCTGGGGCTGGCCCGAGGTCAACATCCGTCCCTGGGCGCCGCTGCTGGA GGAGATGGCCGCCGAGATGGGTCGCCTGCCGTGGGCGGACCGGGAGCCGTACGCGTACTG GAAGGGCAACCCCACCGTGTCCGCCGAGCGCGCCGACCTCCGCCGCTGCAACGACTCCTC GTCGTCCGGCGGCACGCGCGTGTTCTGGCAGGACTGGGGCGCCGCCATCCGGGACGGCTT CCGGGACTCCAACCTGGCCAAGCAGTGCCGCTACCGCTACAAGATCTACGTGCGTGGCCG GTCCTGGTCGGTCAGCCTCAAGTACATCCTCGCCTGCGACTCGCCGGTGCTGCTCATCGC CACGCCCTTCAAGGACTTCTTCTCCCGGGGCCTCGTCGCCGGCAGGCACTACTGGCCCAT CGACCCCGGAGCCCGCAAGTGCGCCGACATCAACTTCGCCGTCCACGACTGGGGCAACGC GCACCCGGAGCAGGCGCGCCGGATGGCGGAGGAAGGCAGCGGCTTCGCGCGCCACCAGCT CAGCATGGACTACGTCTACGACTACATGCTGCACCTGCTCACCCAGTACGCCGGCCTGCT CCGCTACAAGCCCACCGTGCCGGAGAACGCCGTAGAGCTGTGCGCCGAGACCGTCGCCTG CCCCGCTGCGCACCACAGCAACAGGAGGGAGTTCGACTTCATGATGCAGTCCAGGGAGAG GTACATCGCCGACTACCAGCCCTGCACGCTGCCGCCGCCCTTTACCGACCGTCACATCAG GGAGATGACGCGAAGAGACCAGGAGGTGCGCGCCAACGTGCACAAGATGATGACCACCGT CACTCCATGACGTCACCAATTAAGGGATTCTCTTGTTCTCTATCTATCTATCTATCTTGA ATATCCACTTCGTTATACTACGTCCTGGTCTCTGTCTCTATAATATTAAAATATCAGTTT TCATGGTCTTATTTTTTGAAAAAA