Plant GARDEN How To ▶︎

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Zea mays

CDS Sequence

CDS ID

Zm00001d052721_T002

CDS Infomation

cds chromosome:B73_RefGen_v4:4:198792516:198796175:1 gene:Zm00001d052721 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ubiquitin family protein

Sequence

ATGGGCAATGGAGCTCAAGGAAATTCAACATCTGCTATTCCACAAGCTTCTGTTGGTGGT
GTTTCTGGTGTTCCTCTTATAGCGGCACAGGTAGCCAATGCATTGGCAAATGCACCAAGC
CAGGTTTCTTTATCTACACAAAGTGCAGCAGATCAGGGATTTCACCTGACTACAGACAAC
AGAGCTGATGTTCTGAGTTCATCAACACCAGCCACTACACCACAGAATGGTCCCTCAGGT
ACTTCCGGTTCCAGTTTGCCATCTCAAGACAGGAATACTTTAAATGTTCCCAGTCTTGAT
AGTATACAACAGCATCCACAATTGGGAGATACTTGTGCAGATACAGCTGACTTATCAGGA
GACGCCACAGCCATCAGTACTCATGATGCTCCTTCGAACCCATCAGTTGACAGTTCTGTG
CTGAAGAACAAATCCTCGGATGAAGTAGGTTCACAGACCACTGAGCCTTCTGCAAGTGGC
AGTGCTGAACCATTAGGTCTTGGTGGAGGTCTGATTCCAATTCCAAAGAGGCGGAGCAAA
GCAGTAAAGCCATCTGGGAGCACAACTGATCCTAGTAGGGATTTGTCCTCAGTCAGCCAA
AACCAAGATCCTATTTCAGTAGCCCAGCAGTTTCTGGAAGGTTTTGCTTCCCGAAATACT
AATGGTAGCAGAAGCAACACCCTCTCCTCTGGTCCTCCATCTTCTGTGCCACAGGCTACT
GAAGTTCCTCCGAGAAGACAGGGTGGTGGACAACCTGATATTGGCAGCATGATATCTGGT
ATGCTCAACAACCCAGTTTTCAGCAACATGTTGTCGAATGTGGCAACACAGGCAGGGGGC
TCTAGTGCTGATTTGAAGAGCGTGATGGAAGGATTACAAAGCCCTGCTATTGTAGATACG
ATAAGCAATATCGTGCAGAATGTGGATGAGCAAGACCTGGGGGCCATGTTTGGTTCAGGC
AGAGGACAAGGTGGCATGGATTTGTCAAGGATGTTGCAGCAAATGATGCCCGTTGTATCC
CAGGCTCTTGGTGGTGCAGGGGGGCGTTCTGCTGGTGCAAATGGTGGACAGCATAGGTCG
CGGCCTCAGCGCATTGACGGTGAAGGAAATGCACCAGCCAGCAGTTCTCAGATTGATCTC
CATGAAGCTCGTCAAAGCATTGAACAGCATGAATCCCCAGAGAATATCTTCCGCGCTGTC
CTTGAAACTGCTGCTCAGGCCCATGGTGAAGATAACAGCATTCAGGGCATGGTCGAAGAA
CTTGCCACTGATCAAGAGCTTGCCGATGACTACATGAAACTTTTGATGGAACAAGTTCGG
CAGAGGATACAGTCAGAGTCGCAGTCGGGGAGCCAGCCTTGA

Peptide Sequence

PEP ID

Zm00001d052721_P002

PEP Infomation

pep chromosome:B73_RefGen_v4:4:198792516:198796175:1 gene:Zm00001d052721 transcript:Zm00001d052721_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ubiquitin family protein

Sequence

MGNGAQGNSTSAIPQASVGGVSGVPLIAAQVANALANAPSQVSLSTQSAADQGFHLTTDN
RADVLSSSTPATTPQNGPSGTSGSSLPSQDRNTLNVPSLDSIQQHPQLGDTCADTADLSG
DATAISTHDAPSNPSVDSSVLKNKSSDEVGSQTTEPSASGSAEPLGLGGGLIPIPKRRSK
AVKPSGSTTDPSRDLSSVSQNQDPISVAQQFLEGFASRNTNGSRSNTLSSGPPSSVPQAT
EVPPRRQGGGQPDIGSMISGMLNNPVFSNMLSNVATQAGGSSADLKSVMEGLQSPAIVDT
ISNIVQNVDEQDLGAMFGSGRGQGGMDLSRMLQQMMPVVSQALGGAGGRSAGANGGQHRS
RPQRIDGEGNAPASSSQIDLHEARQSIEQHESPENIFRAVLETAAQAHGEDNSIQGMVEE
LATDQELADDYMKLLMEQVRQRIQSESQSGSQP

Transcript Sequence

Transcript ID

Zm00001d052721_T002

Transcript Infomation

cdna chromosome:B73_RefGen_v4:4:198792516:198796175:1 gene:Zm00001d052721 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ubiquitin family protein

Sequence

AGATCCAAACTGAATCGGTTCAGCTAGGAATTTCGATGCAACATTTGGGTGCTATGTTCT
TTGAGCTTGGTCGGACGATGATGATGCTTCGCACAGGGCAATCTCCTTCTGAGGCTTTTG
TAAATTCTGGGCCTGCTGTTTATATAAACTCCACAGGACCAAACCCAATCATGGTTCAGC
CATCTTTTCAAAACACCCCTCCTTTTGGTGTATCTAATATACCAGTTCTGGGTGGAATTT
CTGGTGCTTTTGGTATTGTTGATCCTTCTCGACATATGAATATCCCAAGTAACGGTGCAT
CTGCAACAAGTGGTTCAGCTGCTGGTACTACCACCGGTTCTGAAGGAGCTATCCACGGGA
ACCGCCAAGATGCGGCAAGAACTCAAGGAGGTAACCCACCAGGTTTCCTGGCTGCAACAC
GTGGATTGCCAACCAGAACAGTTGTTGCTGCTGTTCCAGCACGGTCCTCAGGCGAGGCTC
CAAACCATATCTTTAGTGTTATCCTACCTGTTCAAGTGAGGGGTCAATGGGCAATGGAGC
TCAAGGAAATTCAACATCTGCTATTCCACAAGCTTCTGTTGGTGGTGTTTCTGGTGTTCC
TCTTATAGCGGCACAGGTAGCCAATGCATTGGCAAATGCACCAAGCCAGGTTTCTTTATC
TACACAAAGTGCAGCAGATCAGGGATTTCACCTGACTACAGACAACAGAGCTGATGTTCT
GAGTTCATCAACACCAGCCACTACACCACAGAATGGTCCCTCAGGTACTTCCGGTTCCAG
TTTGCCATCTCAAGACAGGAATACTTTAAATGTTCCCAGTCTTGATAGTATACAACAGCA
TCCACAATTGGGAGATACTTGTGCAGATACAGCTGACTTATCAGGAGACGCCACAGCCAT
CAGTACTCATGATGCTCCTTCGAACCCATCAGTTGACAGTTCTGTGCTGAAGAACAAATC
CTCGGATGAAGTAGGTTCACAGACCACTGAGCCTTCTGCAAGTGGCAGTGCTGAACCATT
AGGTCTTGGTGGAGGTCTGATTCCAATTCCAAAGAGGCGGAGCAAAGCAGTAAAGCCATC
TGGGAGCACAACTGATCCTAGTAGGGATTTGTCCTCAGTCAGCCAAAACCAAGATCCTAT
TTCAGTAGCCCAGCAGTTTCTGGAAGGTTTTGCTTCCCGAAATACTAATGGTAGCAGAAG
CAACACCCTCTCCTCTGGTCCTCCATCTTCTGTGCCACAGGCTACTGAAGTTCCTCCGAG
AAGACAGGGTGGTGGACAACCTGATATTGGCAGCATGATATCTGGTATGCTCAACAACCC
AGTTTTCAGCAACATGTTGTCGAATGTGGCAACACAGGCAGGGGGCTCTAGTGCTGATTT
GAAGAGCGTGATGGAAGGATTACAAAGCCCTGCTATTGTAGATACGATAAGCAATATCGT
GCAGAATGTGGATGAGCAAGACCTGGGGGCCATGTTTGGTTCAGGCAGAGGACAAGGTGG
CATGGATTTGTCAAGGATGTTGCAGCAAATGATGCCCGTTGTATCCCAGGCTCTTGGTGG
TGCAGGGGGGCGTTCTGCTGGTGCAAATGGTGGACAGCATAGGTCGCGGCCTCAGCGCAT
TGACGGTGAAGGAAATGCACCAGCCAGCAGTTCTCAGATTGATCTCCATGAAGCTCGTCA
AAGCATTGAACAGCATGAATCCCCAGAGAATATCTTCCGCGCTGTCCTTGAAACTGCTGC
TCAGGCCCATGGTGAAGATAACAGCATTCAGGGCATGGTCGAAGAACTTGCCACTGATCA
AGAGCTTGCCGATGACTACATGAAACTTTTGATGGAACAAGTTCGGCAGAGGATACAGTC
AGAGTCGCAGTCGGGGAGCCAGCCTTGAAGGATTGGGCGGCAGGGTCGTGTAGCCAGCCA
TTCGCTCTGCGATATTTATCTATGGGAAAGAACAGAACCAAAGCTGTTGTCTGGGCGTTT
TCATGATTAGGTGCCCGGTGTACATGTGGCGTTGTAATTTTCCGAGATAATGTATCTGCA
GCAGCATATCTCGTACTCTGGTTAGAACTGTTTTTTTTTACGAATTTTGCTAGAGGTACA
TACAACGAGTTTTAAAGGTGGTGACGTCTGAATTTCGTGGAATTGACAATGACATGTCTG
TATGATTGGT