Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d052683_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:4:197237690:197239606:1 gene:Zm00001d052683 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GRMZM2G097297 description:O-methyltransferase ZRP4
Sequence

ATGGCGCTCAGCAAGGAGCAAAAACTCACAATTTCTGAGCAACAACACACGGCAAGCAGC
GAACAGCAGGTGGCGCTGGATGCCGAGCTCCAGCTGTGGAACCACACCTTCGGCTACGTC
AAGTCCATGGCGCTCAAGGCCGCGCTCGACCTCGGCATACCCGATGCCATCCACCAGCAC
GGCGGCTCGGCTACCATCCCACAGATAGTCACCAGGATCACGCTCCACCCGTCCAAGACA
CCATGCCTGCGGCGCCTCATGCGCGTGCTCACCGTCACCGGCGTCTTCGGCACCCAGGAG
CCGCACGATGACGGGGGCGGCTGTGACGACGAGCTCGTCTACACGCTCACGCCGGCGTCC
CGTCTCCTTGTCGGCCCACCGGGGCAGAACGTGAGCCCTTTACTGAACGTGATGCTCTGC
CCCATCTTCGTGTCGTCCTTCCTCGACCTCCGCGGGTGGTTCCAGCACGAGATGCCGGAC
CCGTCCCCCTTCAAGGTGACGCACGGGCGGGACATATGGGAGCTGGCCGCCCACGACGCC
GGCTTCAGCAGGCTCTTCGACGCCGGCATGGTCGCGGACAGCGGCTTCATCATGAACGTC
GTGGTCAGGGAGTGCGGCAGCGGCACCGTCTTCCAGGGGATCAGCTCCCTCGTCGACGTC
GGCGGCGGGTTTGGTGGCGCCACACAGGCCATCGCGAAAGCGTTCCCGCACCTGGAGTGC
AGCGTGCTAGATCTCCCGAACGTCGTCGCCGGCGCTCCTGCTGATACCGCCGTGAAGTAT
GTCGCCGGTGACATGTTCGAGAGCGTTTCGTCGGCAGACGCTGTCTTCCTCAAGTCGATT
ATACATGACTGGGGTGATGCCGACTGTGTCAAGATACTGAAGAACTGCAAGAAGGCCATA
CCAGCTCAAGGAGGCAAGGTGATAATACTGGATATCGTGGTTGGAGCAGGATCGTCGTCG
TGCGACCGGAAGAACGTGGAGACGCAATGCTTGTTTGATCTCTACATCATGACTATCAAC
GGTGTCGAGCGAGATGAGCGAGAGTGGAAGAAGATCATCTTTGAAGCCGGGTTTACATCT
TACAAGATCATACCTGTTCTGGGCACTCGATCCATAATTGAAGTCTGCCCATAG

Peptide Sequence

PEP ID

Zm00001d052683_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:4:197237690:197239606:1 gene:Zm00001d052683 transcript:Zm00001d052683_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GRMZM2G097297 description:O-methyltransferase ZRP4
Sequence

MALSKEQKLTISEQQHTASSEQQVALDAELQLWNHTFGYVKSMALKAALDLGIPDAIHQH
GGSATIPQIVTRITLHPSKTPCLRRLMRVLTVTGVFGTQEPHDDGGGCDDELVYTLTPAS
RLLVGPPGQNVSPLLNVMLCPIFVSSFLDLRGWFQHEMPDPSPFKVTHGRDIWELAAHDA
GFSRLFDAGMVADSGFIMNVVVRECGSGTVFQGISSLVDVGGGFGGATQAIAKAFPHLEC
SVLDLPNVVAGAPADTAVKYVAGDMFESVSSADAVFLKSIIHDWGDADCVKILKNCKKAI
PAQGGKVIILDIVVGAGSSSCDRKNVETQCLFDLYIMTINGVERDEREWKKIIFEAGFTS
YKIIPVLGTRSIIEVCP

Transcript Sequence

Transcript ID

Zm00001d052683_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:4:197237690:197239606:1 gene:Zm00001d052683 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GRMZM2G097297 description:O-methyltransferase ZRP4
Sequence

AAGCTCACAGCAAAATAAAAGCCAGGCGGCGGCATATGGCGCTCAGCAAGGAGCAAAAAC
TCACAATTTCTGAGCAACAACACACGGCAAGCAGCGAACAGCAGGTGGCGCTGGATGCCG
AGCTCCAGCTGTGGAACCACACCTTCGGCTACGTCAAGTCCATGGCGCTCAAGGCCGCGC
TCGACCTCGGCATACCCGATGCCATCCACCAGCACGGCGGCTCGGCTACCATCCCACAGA
TAGTCACCAGGATCACGCTCCACCCGTCCAAGACACCATGCCTGCGGCGCCTCATGCGCG
TGCTCACCGTCACCGGCGTCTTCGGCACCCAGGAGCCGCACGATGACGGGGGCGGCTGTG
ACGACGAGCTCGTCTACACGCTCACGCCGGCGTCCCGTCTCCTTGTCGGCCCACCGGGGC
AGAACGTGAGCCCTTTACTGAACGTGATGCTCTGCCCCATCTTCGTGTCGTCCTTCCTCG
ACCTCCGCGGGTGGTTCCAGCACGAGATGCCGGACCCGTCCCCCTTCAAGGTGACGCACG
GGCGGGACATATGGGAGCTGGCCGCCCACGACGCCGGCTTCAGCAGGCTCTTCGACGCCG
GCATGGTCGCGGACAGCGGCTTCATCATGAACGTCGTGGTCAGGGAGTGCGGCAGCGGCA
CCGTCTTCCAGGGGATCAGCTCCCTCGTCGACGTCGGCGGCGGGTTTGGTGGCGCCACAC
AGGCCATCGCGAAAGCGTTCCCGCACCTGGAGTGCAGCGTGCTAGATCTCCCGAACGTCG
TCGCCGGCGCTCCTGCTGATACCGCCGTGAAGTATGTCGCCGGTGACATGTTCGAGAGCG
TTTCGTCGGCAGACGCTGTCTTCCTCAAGTCGATTATACATGACTGGGGTGATGCCGACT
GTGTCAAGATACTGAAGAACTGCAAGAAGGCCATACCAGCTCAAGGAGGCAAGGTGATAA
TACTGGATATCGTGGTTGGAGCAGGATCGTCGTCGTGCGACCGGAAGAACGTGGAGACGC
AATGCTTGTTTGATCTCTACATCATGACTATCAACGGTGTCGAGCGAGATGAGCGAGAGT
GGAAGAAGATCATCTTTGAAGCCGGGTTTACATCTTACAAGATCATACCTGTTCTGGGCA
CTCGATCCATAATTGAAGTCTGCCCATAGAAACCAATATAATTAAGGATGGCAACAGCCT
CCCATCGCCCTTGCGAGTATAATTCCAAACCAGCACTTCAATACTTGAATCCGTGAGGTT
TTGAGGTCACTTACGTGTTTTACTCATTGTACGCTTTTAAACAATAACTAGCCATTTGTA
CGTGATTTGCTACGGTTGTTATATATATCATATAAATAAATATTAAGATAT