Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d052682_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:4:197136258:197138506:1 gene:Zm00001d052682 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB1 chloroplastic
Sequence

ATGGACGCCACCACCGCCGTGGCTGCGAGGCGCCTCCTCCTCCTCCCGCTCCGCGCCCAG
CCGCCAGCACCGCGGGGCGCAGCGCCGGCCACGGCGAACCCCTGGTGTCGATCCGTTCCG
CGGAGACGACGAGTCCGTGCCGCCCCGGCGCGCGCGTCGCTGGACCGCGCCGCGGTCCTC
CTCGACACCGCGGCCGCGGTGGCCAACGGCGGGACAGGTTACTCGCAGGCGAGCTACTAC
ACGTCTCTGGGACTCTTCGTTCTCTCCGTTCCGGGGCTGTGGTCCCTCATCAAGCGCTCC
GTCAAGTCCAAGATTGTGCAAAAGACATTTGTCAAAGACGAAGGGCAGTCGATGGCGCCA
AATCAGGTGGCTGGAGAGATCCTGTCGTTCTTCACTCGCAATAACTTCACCGTCTCAGAC
CGCGGGGAGGTCATCACATTCGAGGGCACAATGATACCAAACAGAGGCCAGGCGGCGCTG
CTAACCTTCTGCACCTGCATTAGCCTCGGGAGTGTCGGGCTTGTTCTATCAATCGCTGTC
CCAGAAGGTGGCAACAACTGGTTCTGGCTCATGACCCTGAGCCCCTTGGCGGGAGCGTAC
TACTGGACGAAAGCGTCAAGGAAAGAAGAGATCAAGGTCAAGATGATCCTATCCGATGAC
GGGAACGTGTCCGAGATCCTTGTGCAGGGCGATGACGTCCAGGTTGAGCAGATGAGGAAG
GACCTCAAGTTCAGCGAGAAGGGGATGGTCTATGTGAAGGGCATCTTTGAGACATGA

Peptide Sequence

PEP ID

Zm00001d052682_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:4:197136258:197138506:1 gene:Zm00001d052682 transcript:Zm00001d052682_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB1 chloroplastic
Sequence

MDATTAVAARRLLLLPLRAQPPAPRGAAPATANPWCRSVPRRRRVRAAPARASLDRAAVL
LDTAAAVANGGTGYSQASYYTSLGLFVLSVPGLWSLIKRSVKSKIVQKTFVKDEGQSMAP
NQVAGEILSFFTRNNFTVSDRGEVITFEGTMIPNRGQAALLTFCTCISLGSVGLVLSIAV
PEGGNNWFWLMTLSPLAGAYYWTKASRKEEIKVKMILSDDGNVSEILVQGDDVQVEQMRK
DLKFSEKGMVYVKGIFET

Transcript Sequence

Transcript ID

Zm00001d052682_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:4:197136258:197138506:1 gene:Zm00001d052682 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB1 chloroplastic
Sequence

ATCCCCAGCCCAAAATGGACGCCACCACCGCCGTGGCTGCGAGGCGCCTCCTCCTCCTCC
CGCTCCGCGCCCAGCCGCCAGCACCGCGGGGCGCAGCGCCGGCCACGGCGAACCCCTGGT
GTCGATCCGTTCCGCGGAGACGACGAGTCCGTGCCGCCCCGGCGCGCGCGTCGCTGGACC
GCGCCGCGGTCCTCCTCGACACCGCGGCCGCGGTGGCCAACGGCGGGACAGGTTACTCGC
AGGCGAGCTACTACACGTCTCTGGGACTCTTCGTTCTCTCCGTTCCGGGGCTGTGGTCCC
TCATCAAGCGCTCCGTCAAGTCCAAGATTGTGCAAAAGACATTTGTCAAAGACGAAGGGC
AGTCGATGGCGCCAAATCAGGTGGCTGGAGAGATCCTGTCGTTCTTCACTCGCAATAACT
TCACCGTCTCAGACCGCGGGGAGGTCATCACATTCGAGGGCACAATGATACCAAACAGAG
GCCAGGCGGCGCTGCTAACCTTCTGCACCTGCATTAGCCTCGGGAGTGTCGGGCTTGTTC
TATCAATCGCTGTCCCAGAAGGTGGCAACAACTGGTTCTGGCTCATGACCCTGAGCCCCT
TGGCGGGAGCGTACTACTGGACGAAAGCGTCAAGGAAAGAAGAGATCAAGGTCAAGATGA
TCCTATCCGATGACGGGAACGTGTCCGAGATCCTTGTGCAGGGCGATGACGTCCAGGTTG
AGCAGATGAGGAAGGACCTCAAGTTCAGCGAGAAGGGGATGGTCTATGTGAAGGGCATCT
TTGAGACATGACTGGGAGTTTCATACTCTATCTGTGAGTGAACAATCGAGTGGAGACGAG
TCTTTGCTGCAACGGAAACTGCGTAAGCGTAACCCAGGTGAGGAAATGCAAATTGGACGG
GCAAATCTGTACCTTGGCTTAAAGGAAAAAAAGAAGTGATCTTCATACGGGATTTGATTA
TTGTAAGTGTTGCCCGTATGAGGATAGTTAATGTATGAACTCAAACTAATGACTTTATAA
AAAGCTGATGAGAAACACCTTTTTGAGCATGAAAATACTAAAA