Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d052666_T102
CDS Infomation

cds chromosome:B73_RefGen_v4:4:196474527:196480547:1 gene:Zm00001d052666 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:related to retinoblastoma2 description:Retinoblastoma-related protein 2

Sequence

ATGATGGACAAGTCTCACAAGGCAATAGAAGAAGTTTTCAGTATGAAAGCACTAAGTGCT
TCAGAGTGCAAAACAGAGAATTTGGATAAGATAGACACAGATCGCCTGATGTATTTCAAA
GGTCTCATTGATATGGAGTGTTTCCAGTCAAATCTGGAAAAAATGGAGAAACTATGTAAT
TCTAATAACTGTGAAGCGGAGCTTGATTTTAAATTAATTTTGACCAATAATGATTATATT
CCCTGTGCCGAGAATTTGTCGAGGGATTCCACTAATTTAGGATGTTCAAAGTGTGCCTTT
GAAACATTGGCATCTCCCACAAAGACAATAAAGAACATGTTGACTGTTCCTAGTTCCCCT
TTGTCACCCACCAACGGTGGTTCAGTCAAGATTGTGCAAATGACACCAATAACTTCTGCC
ATGACGACAGCTAAGTGGCTTCGTGAGGTGATATCTTCATTGCCAGAGAAGCCTTCATCT
AAGCTTCAGCAGTTGATGTCATCATGCGATAGAGATTTGACAAATGCCGTCACAGAAAGG
GTCAGCATAGTTCTGGAAGCAATTTTTCCAACCAAGTCTTCTGCTGATCGGGGTGGCTCA
TTAGGCCTCAATTGTGCAAATGCCTTTGATACTCTATGGGCAGATGCCAGAAAAATGGAG
GCTTCCAAGTTGTACTATAGGGTATTAGAGGCAATCTGCAGAGCTGAGTTACAAAACAGC
AATGTAAACAATCTAACTCCATTGCTGTCAAATGAGCGTTTTCACCGATGTTTGATTGCA
TGTTCAGCGGAGCTAGTATTGGCGACACATAAGACGGTCATCATGATGTTTCCTGCTGTT
CTTGAGAGTACTGGTCTAACCTCATTTGATTTGAGCAAAATAATTGAGAACTTTGTGAGA
CATGAAGAGACCCTCCCAAGAGAATTGAAAAGACACCTAAATTCCTTAGAAGAACAAATT
TTGGAAAGCATGGCATGGGAGAAAGGTTCATCATTGTATAACTCACTGATTGTTGCCAGG
CCATCTGTTGCTTCAGAAATTAATCGCTTTGGTCTTCTGGCTGAATCAATGCCATCTCTT
GATGACTTAGTGGCAAGGCAGAATATTCATATTGAGGGCTTGCCTGCTACACCATCTAAA
AAACGTGCTGCTGGTCGAGACGACAATGCTGATCCTCGATCACCAAAGAGACCATGCAAT
GAATCTAGGAGCACAGTAGTAGAACACAATTTGCAGACACCTCCACCCAAGCAATGCCAC
ATGGTGTTGACTAGTTTGAAAGCAAAATGCCATCCACTCCAGTCCACATTTGCAAGTCCA
ACTGTCAGTAATCCTGTTGGTGGGAACGAAAAATGTGCTGACGTGACAATTCAGATATTC
TTTTCCAAAATTCTGAAGTTAGCTGCTATTAGAATAAGAAACTTGTGTGAAAGGATTCAA
TATATGGAACAGACAGAGCGTGTCTATAATGTCTTCAAGCAGATTCTTGATCAACAGACA
ACATTATTTTTTAATAGACACATCGATCAACTTATTCTTTGCTGTCTTTATGGTGTTGCA
AAGGTTTGCCAATTAGAACTCTCATTCAGGGAGATACTCAACAATTACAAAAAAGAAGCA
CAATGCAAACCAGAAGTTTTTTTAAGCATCTATATTGGAAGTAGGAATCATAATGGGGTA
TTAATATCACGCCATGTTGATATCATTACTTTTTACAATGAGGTCTTTGTTCCAGCAGCC
AAGCCTTTCCTGGTGTCATTAATATCATCTGGTACTCGTCCAGAAGACAAGAAGAATGCT
AGTGGCCAAGTTCCTGGATCACCGAAGCTATCTCCTTTCCCAAATTTACCAGATATGTCC
CCAAAGAAAGTTTCAGCTTCTCATAATGTATATGTGTCTCCTTTGCGGCAAACCAAGATG
GATTTACTGCTGTCACCAAGTTCCAGGAGTTTTTATGCATGCATTGGTGAAGGCACCCAT
GCTTATCAGAGCCCATCTAAAGATTTGGCTGCTATAAATAGCCGCCTAAATTATAATGGT
CGGAGAGTAAACAGTCGATTAAACTTTGACATGGTGAGCGACTCAGTGGTAGCTGGTAGT
CTAGGCCAGCCAAATGGTGGTTCTACTTCCTTGGATCCTGCAGCTGCATTTAGCCCCCTT
TCAAAGAGAAAGCCAGATACTTGA

Peptide Sequence

PEP ID

Zm00001d052666_P102
PEP Infomation

pep chromosome:B73_RefGen_v4:4:196474527:196480547:1 gene:Zm00001d052666 transcript:Zm00001d052666_T102 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:related to retinoblastoma2 description:Retinoblastoma-related protein 2

Sequence

MMDKSHKAIEEVFSMKALSASECKTENLDKIDTDRLMYFKGLIDMECFQSNLEKMEKLCN
SNNCEAELDFKLILTNNDYIPCAENLSRDSTNLGCSKCAFETLASPTKTIKNMLTVPSSP
LSPTNGGSVKIVQMTPITSAMTTAKWLREVISSLPEKPSSKLQQLMSSCDRDLTNAVTER
VSIVLEAIFPTKSSADRGGSLGLNCANAFDTLWADARKMEASKLYYRVLEAICRAELQNS
NVNNLTPLLSNERFHRCLIACSAELVLATHKTVIMMFPAVLESTGLTSFDLSKIIENFVR
HEETLPRELKRHLNSLEEQILESMAWEKGSSLYNSLIVARPSVASEINRFGLLAESMPSL
DDLVARQNIHIEGLPATPSKKRAAGRDDNADPRSPKRPCNESRSTVVEHNLQTPPPKQCH
MVLTSLKAKCHPLQSTFASPTVSNPVGGNEKCADVTIQIFFSKILKLAAIRIRNLCERIQ
YMEQTERVYNVFKQILDQQTTLFFNRHIDQLILCCLYGVAKVCQLELSFREILNNYKKEA
QCKPEVFLSIYIGSRNHNGVLISRHVDIITFYNEVFVPAAKPFLVSLISSGTRPEDKKNA
SGQVPGSPKLSPFPNLPDMSPKKVSASHNVYVSPLRQTKMDLLLSPSSRSFYACIGEGTH
AYQSPSKDLAAINSRLNYNGRRVNSRLNFDMVSDSVVAGSLGQPNGGSTSLDPAAAFSPL
SKRKPDT

Transcript Sequence

Transcript ID

Zm00001d052666_T102
Transcript Infomation

cdna chromosome:B73_RefGen_v4:4:196474527:196480547:1 gene:Zm00001d052666 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:related to retinoblastoma2 description:Retinoblastoma-related protein 2

Sequence

TCAAACAAACTGAGAAAGGCGTGGATCTTATTGCTTCTTTATGTCATAATTATCATACCT
CTGAAGAATGTTTGAAAGAAATGATGGACAAGTCTCACAAGGCAATAGAAGAAGTTTTCA
GTATGAAAGCACTAAGTGCTTCAGAGTGCAAAACAGAGAATTTGGATAAGATAGACACAG
ATCGCCTGATGTATTTCAAAGGTCTCATTGATATGGAGTGTTTCCAGTCAAATCTGGAAA
AAATGGAGAAACTATGTAATTCTAATAACTGTGAAGCGGAGCTTGATTTTAAATTAATTT
TGACCAATAATGATTATATTCCCTGTGCCGAGAATTTGTCGAGGGATTCCACTAATTTAG
GATGTTCAAAGTGTGCCTTTGAAACATTGGCATCTCCCACAAAGACAATAAAGAACATGT
TGACTGTTCCTAGTTCCCCTTTGTCACCCACCAACGGTGGTTCAGTCAAGATTGTGCAAA
TGACACCAATAACTTCTGCCATGACGACAGCTAAGTGGCTTCGTGAGGTGATATCTTCAT
TGCCAGAGAAGCCTTCATCTAAGCTTCAGCAGTTGATGTCATCATGCGATAGAGATTTGA
CAAATGCCGTCACAGAAAGGGTCAGCATAGTTCTGGAAGCAATTTTTCCAACCAAGTCTT
CTGCTGATCGGGGTGGCTCATTAGGCCTCAATTGTGCAAATGCCTTTGATACTCTATGGG
CAGATGCCAGAAAAATGGAGGCTTCCAAGTTGTACTATAGGGTATTAGAGGCAATCTGCA
GAGCTGAGTTACAAAACAGCAATGTAAACAATCTAACTCCATTGCTGTCAAATGAGCGTT
TTCACCGATGTTTGATTGCATGTTCAGCGGAGCTAGTATTGGCGACACATAAGACGGTCA
TCATGATGTTTCCTGCTGTTCTTGAGAGTACTGGTCTAACCTCATTTGATTTGAGCAAAA
TAATTGAGAACTTTGTGAGACATGAAGAGACCCTCCCAAGAGAATTGAAAAGACACCTAA
ATTCCTTAGAAGAACAAATTTTGGAAAGCATGGCATGGGAGAAAGGTTCATCATTGTATA
ACTCACTGATTGTTGCCAGGCCATCTGTTGCTTCAGAAATTAATCGCTTTGGTCTTCTGG
CTGAATCAATGCCATCTCTTGATGACTTAGTGGCAAGGCAGAATATTCATATTGAGGGCT
TGCCTGCTACACCATCTAAAAAACGTGCTGCTGGTCGAGACGACAATGCTGATCCTCGAT
CACCAAAGAGACCATGCAATGAATCTAGGAGCACAGTAGTAGAACACAATTTGCAGACAC
CTCCACCCAAGCAATGCCACATGGTGTTGACTAGTTTGAAAGCAAAATGCCATCCACTCC
AGTCCACATTTGCAAGTCCAACTGTCAGTAATCCTGTTGGTGGGAACGAAAAATGTGCTG
ACGTGACAATTCAGATATTCTTTTCCAAAATTCTGAAGTTAGCTGCTATTAGAATAAGAA
ACTTGTGTGAAAGGATTCAATATATGGAACAGACAGAGCGTGTCTATAATGTCTTCAAGC
AGATTCTTGATCAACAGACAACATTATTTTTTAATAGACACATCGATCAACTTATTCTTT
GCTGTCTTTATGGTGTTGCAAAGGTTTGCCAATTAGAACTCTCATTCAGGGAGATACTCA
ACAATTACAAAAAAGAAGCACAATGCAAACCAGAAGTTTTTTTAAGCATCTATATTGGAA
GTAGGAATCATAATGGGGTATTAATATCACGCCATGTTGATATCATTACTTTTTACAATG
AGGTCTTTGTTCCAGCAGCCAAGCCTTTCCTGGTGTCATTAATATCATCTGGTACTCGTC
CAGAAGACAAGAAGAATGCTAGTGGCCAAGTTCCTGGATCACCGAAGCTATCTCCTTTCC
CAAATTTACCAGATATGTCCCCAAAGAAAGTTTCAGCTTCTCATAATGTATATGTGTCTC
CTTTGCGGCAAACCAAGATGGATTTACTGCTGTCACCAAGTTCCAGGAGTTTTTATGCAT
GCATTGGTGAAGGCACCCATGCTTATCAGAGCCCATCTAAAGATTTGGCTGCTATAAATA
GCCGCCTAAATTATAATGGTCGGAGAGTAAACAGTCGATTAAACTTTGACATGGTGAGCG
ACTCAGTGGTAGCTGGTAGTCTAGGCCAGCCAAATGGTGGTTCTACTTCCTTGGATCCTG
CAGCTGCATTTAGCCCCCTTTCAAAGAGAAAGCCAGATACTTGATCAAATATAAATGGCG
ATCTCTCTCGTATATAGCTCACAGCTCCATAGCAGTCTATTCTTCTGAATAAGTGGGTTG
ACTGGAGTGATTTAACTGTACATGTATGTGTTAGTGAGAACCAGCAGTTTATAGGCAGCA
AACTGTTTTAAATTAGCTTTGAGGTTTTATCACCATTTCCCTGCTGATTGAACATATTTT
AGATTGCTAATGAATCTTTAGTTTTCAGTGGGTTGACATTAAAAATCCTTATCCTAGTTG
GCTGGTTGTTGGGAGACATTCATCAAGGTTATATTTGGTCGTCAAATAGTACTGTACTTG
ATTCATATCTTTCATATTTTTCACTAGCGTTGGCAACCGTAAATTGCTTTCCTGACTAGG
AACATATTCTTCACAAGTATGGCAACTCTAAACTATTTGACCTTTTATATTCTCATTTTT
AAGTACTTTCTCTATTTCTGCTACTTTTGTACTGTGTATTTCCAGCTTCTCCACCAGACT
GATTGTTAGAGTGTATGCTCCTATATTATCCATGTATGTGTAAATGGGCTGCTAGCCCAT
TAGGGTTAGGGTTCCCCTGGGTCTATATATGTAACCACCCTCTATGCAATAGAAGTTGAA
TATCAGTTTCTATCACTAATGATTCCATATTCAGTGGGCTGCAAGTGATTTGACATACGT
GCCTTATCCTTCAGGTATGTCTCATGTTGACTTTGCTTTTGTAATGGTACTGTTGGCTTC
ATTGCTGGAATGCTGGTTATAATCAACCTTTACTGCTCTATATTGTTCTTTTTTTGGTTT
GCACAACCAGGGTGGTTGGTTTTCTGAATCAATCAATCCATTTCCTCGGACACAAGATAA
TTTTTGTATGTTACACTTCCCAAAATTGCAATTAATTCAGAAGTCTGCCTACTTTCATTC
AGTTAGTTCTCAGCAACACTGAAAGGATATGAATCAGTCAACCCGATAGATGTTTATCTG
GTTATTCCAAACAATCTGACATCACATCTGTTTCTGCAGGCGAGATAAGGAAAATCTGAA
ATGCTATCACCATTTAAAACATTGGCTCCTGGAAGTTCAGGTGATTAACAAACCTCCTTC
ATCTACATCTGACATTGGCATGTATGGTAGAGTCCAGCAACTCTTGTGATGGCAGGAGTC
GTTCTTAAACAGCAACTGCTCCTTCGTTCAGCGCTTCTCATTTCTGATTGTATTGACCGA
GAGCATCCACCTTTCCTTCTGGTATCAACTGAATGAGTTGCCGACACCGACCCATCTGCG
CATAATGGCAGGTTAGGTGTTGCTGTAGAATGAGATGGTTACCATCTTTACAAGCTCAGG
CTATATGATTTCAGCAGCACTGTAACCTGGGGTGCAAATGTTAAGGCCCTGCAAGCACTT
TCCAGGCCACACCAATTCTGCTTGGTTCTTGAAGATACATTCTTCCTATGGTGCCCCCTA
TATAAAAGCCATTTCTGGTTGTTATGTTTATCCTTGACATGTCAACAGATTAGTGTTGGG
TTGCAGTCATGCGGTCCTTAAGTCTCGGAGAAGGCGAGAAGTCATTGCTGCTAGCATTGT
GATCGTCGGCCACGAAAGTAATCAAAAAGTGAGAGCTACTTGTTCCTAGCAAATGGAGAA
GGGCGATATATAGGTTTATGATCAAATTCAGTGTATGCAAGCAGCATATTTTGTTTAGAG
TTAGCTTTTGAGGTTCATCATTTCATTTCACAGCTGATTCTCTATGTTGTAACTCCTTAG
TCGTGTAGAAATTAGAATGCTATCTGCTTAATTTTTAGTGAATAATTTGCTAGTATATTT