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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d052639_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:4:195500434:195501450:-1 gene:Zm00001d052639 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative RING zinc finger domain superfamily protein

Sequence

ATGGCCGTGCAAGCGCAGTTCGGCGGCCTCGCCGCCGGGTGCCTGCTTCCCTACGGCGGC
GGCGGCGGATTGGCCGAAGAGCAGCTGCACCTGCAGGCGCTCCTATCGGCCGCCGCGGGC
AGCAAGGCGGCGCAGCAGCAGCGCCACTGCGCGGCCGGCGTGGCCAGCGCCGCGCAGAGC
GAGCTGACGTGCAACGGCGTCGTCGGCTTGGGAGGCGTGGTGGCGTCGCGGAAGCGCGGC
AGGGACGGCGAGCTCGAGGAGTACCAGCAGTACGTGCCGCCCTCGTCGACCGCGCTGCTC
CCGATCCCGGGGGCGCATCATCAGAGGCCGGCAGCGGGGAGCGTCCCGATGGCTGCGGCG
ACGGCGACGACCAGCGGGCGCGCGCTGCTGGTGGTGGTGGCGGAGGCGGAGCTGCGGCGG
CAGGGCGCGGAGGTGGACGCGCTGGTGCGCGCCGGGTGCGAGCGGCTGCGCGCGGGCCTG
GAGCGGGCGCGGGGGCGGCAGCGCGAGGCGGTGGCGCGCGCCGCCGCGCGCGCGCTGCGG
GAGAAGGAGGCGGAGCTGGCGGCGGCCCGGGCGCGCGCGGCGGAGCTGGAGGAGCGGCTG
CGGCTGGCGGCCGCCGAGGCGCAGGCGTGGTGCGGCCTGGCGCGCAGCAACGAGGCCGCC
GCGTCGGGCCTGCGCGCCACGCTCGACGCCCTGCTGCTCCGCTGCGCGGGCGCCGCCGGT
GGTGGTGCCACTGGTGGTGCGGCGACGCGGCCCGCCGCCACCGCGGCCGAGGAAGTGGAG
GAGGGCTTCGGCGAGTCCGGCGGCACGGACAACGACGCCGAGTCGTGCTGCTTCGGCGGC
GACGCGGCCTCCCCCGCGAGGTGGGCGTGGTGCCGGGCGTGCGGCGAGCGGGAGGCGTCG
GTGCTCCTGCTGCCGTGCCGGCACCTGTGCCTGTGCAAGGCGTGCGAGCCCCGCACGGAC
GCCTGCCCGGTCTGCTCCGGCGCCAAGAACACGGCCATCCACATCGCGCCCAACTGA

Peptide Sequence

PEP ID

Zm00001d052639_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:4:195500434:195501450:-1 gene:Zm00001d052639 transcript:Zm00001d052639_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative RING zinc finger domain superfamily protein

Sequence

MAVQAQFGGLAAGCLLPYGGGGGLAEEQLHLQALLSAAAGSKAAQQQRHCAAGVASAAQS
ELTCNGVVGLGGVVASRKRGRDGELEEYQQYVPPSSTALLPIPGAHHQRPAAGSVPMAAA
TATTSGRALLVVVAEAELRRQGAEVDALVRAGCERLRAGLERARGRQREAVARAAARALR
EKEAELAAARARAAELEERLRLAAAEAQAWCGLARSNEAAASGLRATLDALLLRCAGAAG
GGATGGAATRPAATAAEEVEEGFGESGGTDNDAESCCFGGDAASPARWAWCRACGEREAS
VLLLPCRHLCLCKACEPRTDACPVCSGAKNTAIHIAPN

Transcript Sequence

Transcript ID

Zm00001d052639_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:4:195500434:195501450:-1 gene:Zm00001d052639 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative RING zinc finger domain superfamily protein

Sequence

ATGGCCGTGCAAGCGCAGTTCGGCGGCCTCGCCGCCGGGTGCCTGCTTCCCTACGGCGGC
GGCGGCGGATTGGCCGAAGAGCAGCTGCACCTGCAGGCGCTCCTATCGGCCGCCGCGGGC
AGCAAGGCGGCGCAGCAGCAGCGCCACTGCGCGGCCGGCGTGGCCAGCGCCGCGCAGAGC
GAGCTGACGTGCAACGGCGTCGTCGGCTTGGGAGGCGTGGTGGCGTCGCGGAAGCGCGGC
AGGGACGGCGAGCTCGAGGAGTACCAGCAGTACGTGCCGCCCTCGTCGACCGCGCTGCTC
CCGATCCCGGGGGCGCATCATCAGAGGCCGGCAGCGGGGAGCGTCCCGATGGCTGCGGCG
ACGGCGACGACCAGCGGGCGCGCGCTGCTGGTGGTGGTGGCGGAGGCGGAGCTGCGGCGG
CAGGGCGCGGAGGTGGACGCGCTGGTGCGCGCCGGGTGCGAGCGGCTGCGCGCGGGCCTG
GAGCGGGCGCGGGGGCGGCAGCGCGAGGCGGTGGCGCGCGCCGCCGCGCGCGCGCTGCGG
GAGAAGGAGGCGGAGCTGGCGGCGGCCCGGGCGCGCGCGGCGGAGCTGGAGGAGCGGCTG
CGGCTGGCGGCCGCCGAGGCGCAGGCGTGGTGCGGCCTGGCGCGCAGCAACGAGGCCGCC
GCGTCGGGCCTGCGCGCCACGCTCGACGCCCTGCTGCTCCGCTGCGCGGGCGCCGCCGGT
GGTGGTGCCACTGGTGGTGCGGCGACGCGGCCCGCCGCCACCGCGGCCGAGGAAGTGGAG
GAGGGCTTCGGCGAGTCCGGCGGCACGGACAACGACGCCGAGTCGTGCTGCTTCGGCGGC
GACGCGGCCTCCCCCGCGAGGTGGGCGTGGTGCCGGGCGTGCGGCGAGCGGGAGGCGTCG
GTGCTCCTGCTGCCGTGCCGGCACCTGTGCCTGTGCAAGGCGTGCGAGCCCCGCACGGAC
GCCTGCCCGGTCTGCTCCGGCGCCAAGAACACGGCCATCCACATCGCGCCCAACTGA