Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d052630_T002
CDS Infomation	cds chromosome:B73_RefGen_v4:4:195316205:195318961:-1 gene:Zm00001d052630 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat (PPR) superfamily protein
Sequence	ATGCTGCCGGCGGCTGCCACCGCTGCAGCGCCGGACCCCTCGTGCTCCACCTTCCCCTCC TCCCGCCGCGCTCCCCCTGTCGCTTCGCGTCACAGCTTCGTTGTTGCAACAAGAGCCACC GGCAGCTCGGGTCTCTTCTCTCTCCGGTGTCACGGTCGCCTTCCCTGCCACTCTCGCTGT CGCTGCCGCTGCCGCGCCTGGTGGAACAATGAGCGAGCGCGCCGGGTATCCGGCGCCAGC CGTGGCCGCCATTGCCGGGCCGTCGCGTCGGCGCCGGACCACATGGACGAGCAGCCGGCG AGGGGGAGGTACCACCCGTTCGAGGAGATCTCCGAGGCGGTGCAGCTGGACGACGGCGAG CCGGCCCACCTGACCGACGCCGAGTCAGCCCGAACAATCGTCGAGGTGAACAACAAGGCG ACGGTGATGATCTCCACGCTCGTCGGCGACGGTGTGCACGAGCGGATCATCCTGCCGGAG TTCCCCTACCTCACCGACGAGAACGGAGATATCTACTTCGAGGTCGACAACGAGGACGCG CTGCTGGAGAGCATCATGGGGGAGGACAAGATCGCGCACGTTATCATCGGATTGGACAAC ACACAGGTCTTCGCCGACTTGGATCTCGTCTCGGCCTCCGCCACAGAGTTTGCGCAAGAA GACGACAACGGCGATGAGGACGATGACGGCTCCGACGATGATGAGGAAAGCGACTTTGAC GAGGACTTCAACGACGTGGAGGGTGTGTTTTCGGTTGATGAGGACGACGAAGATGACAGA GAGGAAGAGGAGGAGGAGGACGACGACGACGATGACGAGGACCTACCAAGCTGGTCCAAC CTTGAGACCGTGAATTCCTGCCATCCACTGTACTTTGCAAGGATGATTGTAGAGACTGCA ACCAAGTCTAGCATAGACTGGCTGGACCGGCCACCTGCAAGCCTTGTCGTCGAGGGCCAG CTGAGGCCTGCCTTTGCTGAGGAGAGCACCATGGTTGCCAAGCATATATCAAGTATAACT GCTGTGAATGAATTAAAACCAGACCAGCCACCTTGTATCCAGCAGATGTCTGCATTCTAC GAGAGCATGCGATTCTTACAGCAGCCAAAGGTAAAGATTGAAGAATACCAGAAGGCTAAG CCGGACATCATCGCGCATTCTGCACCGAACGTAATATCGCGCCTGAGAGCTGGTGGAGAC AAGGTCACCCAGGCTCTGAAATCTCTCTGTTGGAGGAGCAAGGCCATTCAAGTAGAGGAG GCAGCGGTGATCGGAGTGGACTGCCTTGGTTTTGACCTGAGAGTGTGCTCAGGAACTCAA GTGCAGACATTGAGATTTGCTTTCCCTACAAAGGCCACTTCAGAGTTCTCTGCAGAGAAG CAAATACATGAGCTTCTGTTTCCTAGGAATACACATCAAGAAGGGCAATCACCACAGGCC CGACAGAAGTCCTGA

Peptide Sequence

PEP ID	Zm00001d052630_P002
PEP Infomation	pep chromosome:B73_RefGen_v4:4:195316205:195318961:-1 gene:Zm00001d052630 transcript:Zm00001d052630_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat (PPR) superfamily protein
Sequence	MLPAAATAAAPDPSCSTFPSSRRAPPVASRHSFVVATRATGSSGLFSLRCHGRLPCHSRC RCRCRAWWNNERARRVSGASRGRHCRAVASAPDHMDEQPARGRYHPFEEISEAVQLDDGE PAHLTDAESARTIVEVNNKATVMISTLVGDGVHERIILPEFPYLTDENGDIYFEVDNEDA LLESIMGEDKIAHVIIGLDNTQVFADLDLVSASATEFAQEDDNGDEDDDGSDDDEESDFD EDFNDVEGVFSVDEDDEDDREEEEEEDDDDDDEDLPSWSNLETVNSCHPLYFARMIVETA TKSSIDWLDRPPASLVVEGQLRPAFAEESTMVAKHISSITAVNELKPDQPPCIQQMSAFY ESMRFLQQPKVKIEEYQKAKPDIIAHSAPNVISRLRAGGDKVTQALKSLCWRSKAIQVEE AAVIGVDCLGFDLRVCSGTQVQTLRFAFPTKATSEFSAEKQIHELLFPRNTHQEGQSPQA RQKS

Transcript Sequence

Transcript ID	Zm00001d052630_T002
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:195316205:195318961:-1 gene:Zm00001d052630 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat (PPR) superfamily protein
Sequence	GCGACAGCTCCGGTTTGGGGGGATAGGGAGCGAGAGGCGGCCGCGCCACACAAAACTATC TCCGCCGCGGCTCCGTTGCATGGTATACCATGCTGCCGGCGGCTGCCACCGCTGCAGCGC CGGACCCCTCGTGCTCCACCTTCCCCTCCTCCCGCCGCGCTCCCCCTGTCGCTTCGCGTC ACAGCTTCGTTGTTGCAACAAGAGCCACCGGCAGCTCGGGTCTCTTCTCTCTCCGGTGTC ACGGTCGCCTTCCCTGCCACTCTCGCTGTCGCTGCCGCTGCCGCGCCTGGTGGAACAATG AGCGAGCGCGCCGGGTATCCGGCGCCAGCCGTGGCCGCCATTGCCGGGCCGTCGCGTCGG CGCCGGACCACATGGACGAGCAGCCGGCGAGGGGGAGGTACCACCCGTTCGAGGAGATCT CCGAGGCGGTGCAGCTGGACGACGGCGAGCCGGCCCACCTGACCGACGCCGAGTCAGCCC GAACAATCGTCGAGGTGAACAACAAGGCGACGGTGATGATCTCCACGCTCGTCGGCGACG GTGTGCACGAGCGGATCATCCTGCCGGAGTTCCCCTACCTCACCGACGAGAACGGAGATA TCTACTTCGAGGTCGACAACGAGGACGCGCTGCTGGAGAGCATCATGGGGGAGGACAAGA TCGCGCACGTTATCATCGGATTGGACAACACACAGGTCTTCGCCGACTTGGATCTCGTCT CGGCCTCCGCCACAGAGTTTGCGCAAGAAGACGACAACGGCGATGAGGACGATGACGGCT CCGACGATGATGAGGAAAGCGACTTTGACGAGGACTTCAACGACGTGGAGGGTGTGTTTT CGGTTGATGAGGACGACGAAGATGACAGAGAGGAAGAGGAGGAGGAGGACGACGACGACG ATGACGAGGACCTACCAAGCTGGTCCAACCTTGAGACCGTGAATTCCTGCCATCCACTGT ACTTTGCAAGGATGATTGTAGAGACTGCAACCAAGTCTAGCATAGACTGGCTGGACCGGC CACCTGCAAGCCTTGTCGTCGAGGGCCAGCTGAGGCCTGCCTTTGCTGAGGAGAGCACCA TGGTTGCCAAGCATATATCAAGTATAACTGCTGTGAATGAATTAAAACCAGACCAGCCAC CTTGTATCCAGCAGATGTCTGCATTCTACGAGAGCATGCGATTCTTACAGCAGCCAAAGG TAAAGATTGAAGAATACCAGAAGGCTAAGCCGGACATCATCGCGCATTCTGCACCGAACG TAATATCGCGCCTGAGAGCTGGTGGAGACAAGGTCACCCAGGCTCTGAAATCTCTCTGTT GGAGGAGCAAGGCCATTCAAGTAGAGGAGGCAGCGGTGATCGGAGTGGACTGCCTTGGTT TTGACCTGAGAGTGTGCTCAGGAACTCAAGTGCAGACATTGAGATTTGCTTTCCCTACAA AGGCCACTTCAGAGTTCTCTGCAGAGAAGCAAATACATGAGCTTCTGTTTCCTAGGAATA CACATCAAGAAGGGCAATCACCACAGGCCCGACAGAAGTCCTGATGTAATTCGATCCATC GATGTGGTAACTTCATTCAGATGGTAGGAAATTAATTTAGAGAAATAAATAATAAATTCT TGGTCATGTCCATGAAAGTTGTGGTATAACCTTCAAGCTTGCCATTGATTTCGTGTTTGG