Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d052612_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:4:194612477:194615657:1 gene:Zm00001d052612 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein SMAX1-LIKE 3
Sequence	ATGCGAGCCGGCGGCTGCGCGGTGCAGCAGGCGCTGGCCGCGGAGGCGGCGGCCGTGGTG CGGCAGGCCGTGGCCCTGGCCCGGCGGCGCGGCCACGCGCAGGTGACCCCGCTCCACGTG GCCAGCGCCATGCTCTCGGCGGCGGGGCTCCTCCGCGCCGCCTGCCTCCGCTCCCACTCC CACCCGCTGCAGTGCAAGGCCCTGGAGCTCTGTTTCAACGTGGCGCTTAACCGCCTCCCC ACCGCCGCCGCCTCTATGTTCCACCCCCATCACCACGCCGGGCAGCAGCACGCGCCCGTG CTGTCCAACGCGCTCGTCGCCGCGTTCAAGCGCGCGCAGGCGCACCAGCGCCGGGGCTCC GTGGATGGAGCACAGGGACAACCGCCACAGCCGGTGCTCGCCGGCAAGGTCGACATCGAC CAGCTCATCATCTCCATCCTCGACGACCCCAGCGTGAGCCGCGTCATGCGCGAGGCCGGC TTCTCCAGCTCCCAGGTCAAGGCCAACGTCGAGAAGGCCGTCTCGGCGTCGTCTTCACCG GAGCATCAGCAGCAGAACACGACGATACCACCCACCAGCCGCGCCCACGCGGCGATCTCT CCAGGCGGAGCAGCTTCCGGCGACGCCATGCGCGTGCTCGACTGCATGGCGAGCGGAAGC AAGCGGAGCGTGGTGGTCGTTGGCGAGAGCGCGGCCACCGCGGAGGTGGTGGTGAAGGCG GTGATGAACAGGGTGAGCAAAGGGGAGCTGCAGCAGCGGCACGAGCGGCTCAAGAACGTC CAGTTCGTGCCCCTCTCGGCCGCGTCCTTCCAGCGGATGCCGAGGGAGGAGGTGGAGGCC AAGGCCGCCGACCTGCGCGCGCTCGTCCGCCAGGGCTGCGCCGCCGGGAAGGGCGTCGTG CTCGTCCTCGAGGACCTCGCGTACGCCGCCGAGGCCTGGGCCGCCGTGTCAGAGACGAGA AGGAGGAGCAGCGGCAGTGGCGGCCGTGATCACGGCCAGGGCTGCTACTGCCCCGTCGAG CACGCCGTCATGGAAGTGGGCAGCTTGGTGTCCGCTGCTGCCGGAGGCGGCGGCAGAGGC CTGGACAGGTTCTGGTTGCTAGGGTTTGGGAACAACCAGGCTTATTTGAAGTCCAGAGCA GGGCAGCCATCTCTTGAGGCTGTCTGGGAGCTGCACCCCATCGTCGTGCCGGACGGCGGC CTCGCGCTGAGCCTCAGGTGCAACAGTGACGCCGAACAAGCTAGAGCAACAAGGCCTTGG CCCTTCGCTAACGGCACTGCAGCAACCGGCGACAGTGAGCTCATCACTTTGTCCTGCGCC AAGGTGGCGGCGACAACTCCAAATGTGCCGCCATGGCTTCAGGGCTACCAAGTTCAAGAT ACGACCAGACTGGCGAGCCGCAGCACCAGTTTTCAGATGCAAGATTGGGACCCCAACTCT AATGGAGCAGCTTACCACACGTCGGAGATCACACTGAGCTTCTCCCCACAGGCTACTAAC TCTCCAGACGCTTCTTCAATCTCCGGCTCCTTTGCCCCCAGCTTGATGATGAGCTCCGAA CCATGGCAATTCAAGCTGATGCAACCGTGCCCAAACTATGGACGTGGCGATCCATTTGCC AGGTCCTCTGATCGTCAACAACTGCTTCCAAGGCCGACTAGTCCAGAAAAATCTTACTCC GTGTCCAACTCATCCGAAGGTGCCCCTGCAGCCGAGTCGCCAAAATTCACGGAGCTCACC GCTGAGAATCTCAAGATCCTCTCCAACGCGCTTGAGAACCGAGCTCCACGTCACAAGGAT GTGGTTACAGAGATCGCAAGTGTCGTGCTCCAGTGCCGCTCGGGCATGACAAGAAAGAGG AGGAGATGGTGCTGCCAAGAGAAGCCAAGTGCAGTGACATGGCTGCTCTTCCAAGGAGCG GGCAATGATGGCAAGAAAGCCGTGTCTAAGGAGCTCGCAAGGCTCGTCTTCGGTTCCTAC AGCAAGTTCACCGCCATCTCACTATCCGAGTTCACCCACGTCCACTCCGATTCCAGCTCC GGCGAGATCACGTTGAAGAGGCAAAGATCACTGGACACTGGGCGTAGCTACGTTCAGAGA TTGTATGATGCAATACTCGAAAACCCTCATCGGGTGATAATGATCGACGGTGTTGAGCAA CTGGACTACGAGTCAGAGATCGGCATCAGGAATGCGATCACAAATGGAAGAATTAGGGGT TGCAACGGCGACGAGATCAGTCTGGGGGATACCATCATAGTACTGAATTGTGAAGCACTC CGTTCAATGTCTAACGCTTCCTCCCCTCGGCTCAAGCAAAGGGTCATCGAGAAGGATGGA AAGGAAGGAAATGACATGAACATGGAGAATGGGATGGAGTCATCTGGTTTTACCTTGGAT TTGAATGCATGTGCCGAGGATTGTGAAGGGAACTATGAAGAGAGTGTTTCAGATAATGCG AGGATCGTTAATATTGTGGATGGCGTGTTCTTCTTCCAATTAATGGAGCACTCATGA

Peptide Sequence

PEP ID	Zm00001d052612_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:4:194612477:194615657:1 gene:Zm00001d052612 transcript:Zm00001d052612_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein SMAX1-LIKE 3
Sequence	MRAGGCAVQQALAAEAAAVVRQAVALARRRGHAQVTPLHVASAMLSAAGLLRAACLRSHS HPLQCKALELCFNVALNRLPTAAASMFHPHHHAGQQHAPVLSNALVAAFKRAQAHQRRGS VDGAQGQPPQPVLAGKVDIDQLIISILDDPSVSRVMREAGFSSSQVKANVEKAVSASSSP EHQQQNTTIPPTSRAHAAISPGGAASGDAMRVLDCMASGSKRSVVVVGESAATAEVVVKA VMNRVSKGELQQRHERLKNVQFVPLSAASFQRMPREEVEAKAADLRALVRQGCAAGKGVV LVLEDLAYAAEAWAAVSETRRRSSGSGGRDHGQGCYCPVEHAVMEVGSLVSAAAGGGGRG LDRFWLLGFGNNQAYLKSRAGQPSLEAVWELHPIVVPDGGLALSLRCNSDAEQARATRPW PFANGTAATGDSELITLSCAKVAATTPNVPPWLQGYQVQDTTRLASRSTSFQMQDWDPNS NGAAYHTSEITLSFSPQATNSPDASSISGSFAPSLMMSSEPWQFKLMQPCPNYGRGDPFA RSSDRQQLLPRPTSPEKSYSVSNSSEGAPAAESPKFTELTAENLKILSNALENRAPRHKD VVTEIASVVLQCRSGMTRKRRRWCCQEKPSAVTWLLFQGAGNDGKKAVSKELARLVFGSY SKFTAISLSEFTHVHSDSSSGEITLKRQRSLDTGRSYVQRLYDAILENPHRVIMIDGVEQ LDYESEIGIRNAITNGRIRGCNGDEISLGDTIIVLNCEALRSMSNASSPRLKQRVIEKDG KEGNDMNMENGMESSGFTLDLNACAEDCEGNYEESVSDNARIVNIVDGVFFFQLMEHS

Transcript Sequence

Transcript ID	Zm00001d052612_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:194612477:194615657:1 gene:Zm00001d052612 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein SMAX1-LIKE 3
Sequence	ATGCGAGCCGGCGGCTGCGCGGTGCAGCAGGCGCTGGCCGCGGAGGCGGCGGCCGTGGTG CGGCAGGCCGTGGCCCTGGCCCGGCGGCGCGGCCACGCGCAGGTGACCCCGCTCCACGTG GCCAGCGCCATGCTCTCGGCGGCGGGGCTCCTCCGCGCCGCCTGCCTCCGCTCCCACTCC CACCCGCTGCAGTGCAAGGCCCTGGAGCTCTGTTTCAACGTGGCGCTTAACCGCCTCCCC ACCGCCGCCGCCTCTATGTTCCACCCCCATCACCACGCCGGGCAGCAGCACGCGCCCGTG CTGTCCAACGCGCTCGTCGCCGCGTTCAAGCGCGCGCAGGCGCACCAGCGCCGGGGCTCC GTGGATGGAGCACAGGGACAACCGCCACAGCCGGTGCTCGCCGGCAAGGTCGACATCGAC CAGCTCATCATCTCCATCCTCGACGACCCCAGCGTGAGCCGCGTCATGCGCGAGGCCGGC TTCTCCAGCTCCCAGGTCAAGGCCAACGTCGAGAAGGCCGTCTCGGCGTCGTCTTCACCG GAGCATCAGCAGCAGAACACGACGATACCACCCACCAGCCGCGCCCACGCGGCGATCTCT CCAGGCGGAGCAGCTTCCGGCGACGCCATGCGCGTGCTCGACTGCATGGCGAGCGGAAGC AAGCGGAGCGTGGTGGTCGTTGGCGAGAGCGCGGCCACCGCGGAGGTGGTGGTGAAGGCG GTGATGAACAGGGTGAGCAAAGGGGAGCTGCAGCAGCGGCACGAGCGGCTCAAGAACGTC CAGTTCGTGCCCCTCTCGGCCGCGTCCTTCCAGCGGATGCCGAGGGAGGAGGTGGAGGCC AAGGCCGCCGACCTGCGCGCGCTCGTCCGCCAGGGCTGCGCCGCCGGGAAGGGCGTCGTG CTCGTCCTCGAGGACCTCGCGTACGCCGCCGAGGCCTGGGCCGCCGTGTCAGAGACGAGA AGGAGGAGCAGCGGCAGTGGCGGCCGTGATCACGGCCAGGGCTGCTACTGCCCCGTCGAG CACGCCGTCATGGAAGTGGGCAGCTTGGTGTCCGCTGCTGCCGGAGGCGGCGGCAGAGGC CTGGACAGGTTCTGGTTGCTAGGGTTTGGGAACAACCAGGCTTATTTGAAGTCCAGAGCA GGGCAGCCATCTCTTGAGGCTGTCTGGGAGCTGCACCCCATCGTCGTGCCGGACGGCGGC CTCGCGCTGAGCCTCAGGTGCAACAGTGACGCCGAACAAGCTAGAGCAACAAGGCCTTGG CCCTTCGCTAACGGCACTGCAGCAACCGGCGACAGTGAGCTCATCACTTTGTCCTGCGCC AAGGTGGCGGCGACAACTCCAAATGTGCCGCCATGGCTTCAGGGCTACCAAGTTCAAGAT ACGACCAGACTGGCGAGCCGCAGCACCAGTTTTCAGATGCAAGATTGGGACCCCAACTCT AATGGAGCAGCTTACCACACGTCGGAGATCACACTGAGCTTCTCCCCACAGGCTACTAAC TCTCCAGACGCTTCTTCAATCTCCGGCTCCTTTGCCCCCAGCTTGATGATGAGCTCCGAA CCATGGCAATTCAAGCTGATGCAACCGTGCCCAAACTATGGACGTGGCGATCCATTTGCC AGGTCCTCTGATCGTCAACAACTGCTTCCAAGGCCGACTAGTCCAGAAAAATCTTACTCC GTGTCCAACTCATCCGAAGGTGCCCCTGCAGCCGAGTCGCCAAAATTCACGGAGCTCACC GCTGAGAATCTCAAGATCCTCTCCAACGCGCTTGAGAACCGAGCTCCACGTCACAAGGAT GTGGTTACAGAGATCGCAAGTGTCGTGCTCCAGTGCCGCTCGGGCATGACAAGAAAGAGG AGGAGATGGTGCTGCCAAGAGAAGCCAAGTGCAGTGACATGGCTGCTCTTCCAAGGAGCG GGCAATGATGGCAAGAAAGCCGTGTCTAAGGAGCTCGCAAGGCTCGTCTTCGGTTCCTAC AGCAAGTTCACCGCCATCTCACTATCCGAGTTCACCCACGTCCACTCCGATTCCAGCTCC GGCGAGATCACGTTGAAGAGGCAAAGATCACTGGACACTGGGCGTAGCTACGTTCAGAGA TTGTATGATGCAATACTCGAAAACCCTCATCGGGTGATAATGATCGACGGTGTTGAGCAA CTGGACTACGAGTCAGAGATCGGCATCAGGAATGCGATCACAAATGGAAGAATTAGGGGT TGCAACGGCGACGAGATCAGTCTGGGGGATACCATCATAGTACTGAATTGTGAAGCACTC CGTTCAATGTCTAACGCTTCCTCCCCTCGGCTCAAGCAAAGGGTCATCGAGAAGGATGGA AAGGAAGGAAATGACATGAACATGGAGAATGGGATGGAGTCATCTGGTTTTACCTTGGAT TTGAATGCATGTGCCGAGGATTGTGAAGGGAACTATGAAGAGAGTGTTTCAGATAATGCG AGGATCGTTAATATTGTGGATGGCGTGTTCTTCTTCCAATTAATGGAGCACTCATGACAT TGTATTATTGCTTCATTTGCATCTTCAAGTTAGCCTAGAATTCTTAGTTATTAGTTGTTT TTCTTTGTATTTGTCCTTTATTTGTCCTAGATCTGTAGCTGATCCTTATATTTATTGGTA ATTTGTGTTATGTATAGTTAATTATATGTGATCAGCAACAAACTTATTTGTGGAAATCAG GAGTTAGGGAAGAAAGGGACGGTGTTCATTGAAAACTGATTGCCATATACAATACTCTCT TTTATTTGACTATAATAATCA