Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d052591_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:4:193980463:193982206:-1 gene:Zm00001d052591 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ABI3-VP1-transcription factor 40 description:B3 domain-containing protein

Sequence

ATGGCCACGAACCATCTCTCCCAAGGGCAGCACCAGCACCCGCAGGCCTGGCCCTGGGGC
GTGGCCATGTACACCAACCTACACTACCACCACCAGCAGCACCACCACTACGAGAAGGAG
CACCTGTTCGAGAAGCCGCTGACGCCGAGCGACGTGGGCAAGCTCAACAGGCTGGTGATC
CCCAAGCAGCACGCCGAGAGGTACTTCCCTCTCAGCAGCAGCGGCGCCGGCGACAAAGGC
CTCATCCTGTGCTTCGAGGACGACGACGACGACGAGGCTGCCGCCGCCAACAAGCCGTGG
CGGTTCCGCTACTCGTACTGGACCAGCAGCCAGAGCTACGTGCTCACCAAGGGCTGGAGC
CGCTACGTCAAGGAGAAGCAGCTTGACGCCGGCGACGTCGTGCGCTTCCAGAGGATGCGT
GGTTTCGGCATGCCCGACCGCCTGTTCATCAGCCACAGCCGCCGCGGCGAGACTACTGCT
ACTGCTGCAACAACAGTGCCCCCCGCTGCTGCTGCCGTGCGCGTAGTAGTGGCACCTGCA
CAGAGCGCTGGCGCAGACCACCAGCAGCAGCAGCAGCCGTCGCCTTGGAGCCCAATGTGC
TACAGCACATCAGGCTCGTACTCGTACCCCACCAGCAGCCCAGCCAATTCCCAGCATGCC
TACCACCGCCACTCAGCTGACCATGACCACAGCAACAACATGCAACATGCAGGAGAATCT
CAGTCCGACAGAGACAACAGGAGCTGCAGTGCAGCTTCGGCACCGCCGCCACCGTCGCGG
CGGCTCCGGCTGTTCGGCGTAAACCTCGACTGCGGCCCGGGGCCGGAGCCGGAGACACCA
ACGGCGATGTACGGCTACATGCACCAAAGCCCCTACGCTTACAACAACTGTCCATACCAG
CATGACGAGGAGATTTAA

Peptide Sequence

PEP ID

Zm00001d052591_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:4:193980463:193982206:-1 gene:Zm00001d052591 transcript:Zm00001d052591_T002 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ABI3-VP1-transcription factor 40 description:B3 domain-containing protein

Sequence

MATNHLSQGQHQHPQAWPWGVAMYTNLHYHHQQHHHYEKEHLFEKPLTPSDVGKLNRLVI
PKQHAERYFPLSSSGAGDKGLILCFEDDDDDEAAAANKPWRFRYSYWTSSQSYVLTKGWS
RYVKEKQLDAGDVVRFQRMRGFGMPDRLFISHSRRGETTATAATTVPPAAAAVRVVVAPA
QSAGADHQQQQQPSPWSPMCYSTSGSYSYPTSSPANSQHAYHRHSADHDHSNNMQHAGES
QSDRDNRSCSAASAPPPPSRRLRLFGVNLDCGPGPEPETPTAMYGYMHQSPYAYNNCPYQ
HDEEI

Transcript Sequence

Transcript ID

Zm00001d052591_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:4:193980463:193982206:-1 gene:Zm00001d052591 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ABI3-VP1-transcription factor 40 description:B3 domain-containing protein

Sequence

TCTCTACGCGACACACACACACCATCACTGCGCTGCGCTACTCTACTCCCCACCACCGCC
GCCACCCAAGAGCTTTCCTCGCTGCACAAGAAATGGCCACGAACCATCTCTCCCAAGGGC
AGCACCAGCACCCGCAGGCCTGGCCCTGGGGCGTGGCCATGTACACCAACCTACACTACC
ACCACCAGCAGCACCACCACTACGAGAAGGAGCACCTGTTCGAGAAGCCGCTGACGCCGA
GCGACGTGGGCAAGCTCAACAGGCTGGTGATCCCCAAGCAGCACGCCGAGAGGTACTTCC
CTCTCAGCAGCAGCGGCGCCGGCGACAAAGGCCTCATCCTGTGCTTCGAGGACGACGACG
ACGACGAGGCTGCCGCCGCCAACAAGCCGTGGCGGTTCCGCTACTCGTACTGGACCAGCA
GCCAGAGCTACGTGCTCACCAAGGGCTGGAGCCGCTACGTCAAGGAGAAGCAGCTTGACG
CCGGCGACGTCGTGCGCTTCCAGAGGATGCGTGGTTTCGGCATGCCCGACCGCCTGTTCA
TCAGCCACAGCCGCCGCGGCGAGACTACTGCTACTGCTGCAACAACAGTGCCCCCCGCTG
CTGCTGCCGTGCGCGTAGTAGTGGCACCTGCACAGAGCGCTGGCGCAGACCACCAGCAGC
AGCAGCAGCCGTCGCCTTGGAGCCCAATGTGCTACAGCACATCAGGCTCGTACTCGTACC
CCACCAGCAGCCCAGCCAATTCCCAGCATGCCTACCACCGCCACTCAGCTGACCATGACC
ACAGCAACAACATGCAACATGCAGGAGAATCTCAGTCCGACAGAGACAACAGGAGCTGCA
GTGCAGCTTCGGCACCGCCGCCACCGTCGCGGCGGCTCCGGCTGTTCGGCGTAAACCTCG
ACTGCGGCCCGGGGCCGGAGCCGGAGACACCAACGGCGATGTACGGCTACATGCACCAAA
GCCCCTACGCTTACAACAACTGTCCATACCAGCATGACGAGGAGATTTAAGATTATGCCT
GCAGAATCCAAACAGCCAAAGTAGTAGCAGTAGTAGTTGCTAGCAGCAGCAGCAGCCGCC
TAGTACTACTTGCACACGAAGTGACAGGATTGAATTGACCTGTACACGGGGAGAAAAAAA
AAGGAAGGAAGGAAGTGGAGAGAGATCCCTTGTTTCCCGGGCAATCTTCCTTCCATCCCC
GCCCCCAGAAGAATGCTGCTGCCTTTTTGCTGTTCCGTTTTTTTTTTTTAATTTTTATTT
TCTTCTCCATGGCTTCCAGAAAACCCTACTTACTGTAGGGGATCTGGTAGCAGGGGGCCG
GGCATGCGTGGGAGGTTTGCAGGAAGCATCAAGCTGCCAAGGAGCTGGAACGAGAGACAA
CAGACAGAGAGAGATGTGTGTGTATGTATGTGTGTGTCATCTGTACCTATATGTCTTAAT
TTGTGGGTCCGATAGAGAACAAACTGTGAAGTTGATGTGTGTGCCTGCCTGCCTCCTGAA
GAAACAATGCAATATCCCCATGGGGATTTTGTTCCC