Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d052566_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:4:193332151:193334983:-1 gene:Zm00001d052566 gene_biotype:protein_coding transcript_biotype:protein_coding description:ERAD-associated E3 ubiquitin-protein ligase HRD1A
Sequence	ATGATCCGACTACCGACGTACGCAGCGTTCAGCCTGCTGGCGACGGCGTCGGCGGCGTAC TACGCGTTCAGCAGCCGTGAGCAGTTCTACCCGGCGATGGTGTACCTCTCCACCTCCAAG ATCTGCTTCGTGCTGCTCCTCAACACGGGCCTCGTCGCCATGTGCGTCGCCTGGCAGCTC GCCAGGCGCCTCTTCCTCGGCTCGCTCCGTGAGGCCGAGGTTGAGCGCCTCAACGAGCAG TCCTGGCGGGAGGTCATCGAGATCCTCTTTGCTGTCACCATCTTCCGACAGGATTTCTCT GTTTCCTTTCTTGCCATGGTTGCTGCGCTTCTCCTCGTCAAGGCGCTGCACTGGCTTGCA CAGAAGAGGGTCGAGTACATTGAGACCACGCCCTCTGTGCCCTTGCTCTCGCACATCAGG ATCGTCTCCTTCATGGTTTTCCTGCTTACCGTCGACTGCCTCTTCCTGTCAAACTCGCTC AGGTCACTCATACAGAAGCAGGAGGCGTCCGTTGCCATCTTCTTCTCCTTTGAGTATATG ATACTAGCAACATCCACAGTATCAACATTCGTGAAGTATATATTCTATGTTAGTGACATG CTAATGGAAGGTCAATGGGAGAAAAAGGCAGTGTATACATTTTACTTGGAGCTCATAAGT GACCTTGTGCACTTGTCATTATACATGCTCTTCTTCATAGCTATCTTCCTGAACTATGGT GTCCCGCTGCACTTGATTCGTGAGCTATATGAGACTTTCCGCAACTTCAGAATTCGCATT GCAGATTATGTGCGCTACAGAAAGATCACTTCCAACATGAATGAACGCTTTCCAGATGCT ACATCAGAAGAGCTCGATGTGAGTGATGCTACATGTATTATTTGCCGTGAGGAGATGACT ACAGCAAAGAAACTGCTCTGTGGGCATCTGTTCCATGTGCATTGTCTAAGGTCGTGGCTA GAACGCCAACACACTTGCCCCACGTGCAGAGCTCCAATCATTCCCGCAGATAATGGACAT GCTGTATCAGCACGACAACATGGAGCCCAGGCTGGGGTTCAGCCTGGAAAGGCAGCTGCA GGTACTGCCACTCCATCCTCAGAAGGAGCACCAGGTGAGAACATGAGCAGGCACCAAGCA AAACTTGAAGCTGCTGCAGCGGCAGCTTCTTTATATGGAAGGTCTTTTGTTTATCCTCCA GCAAACACCCTAAAAAGGTATGTTTCTGAAGTTGTCTAA

Peptide Sequence

PEP ID	Zm00001d052566_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:4:193332151:193334983:-1 gene:Zm00001d052566 transcript:Zm00001d052566_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:ERAD-associated E3 ubiquitin-protein ligase HRD1A
Sequence	MIRLPTYAAFSLLATASAAYYAFSSREQFYPAMVYLSTSKICFVLLLNTGLVAMCVAWQL ARRLFLGSLREAEVERLNEQSWREVIEILFAVTIFRQDFSVSFLAMVAALLLVKALHWLA QKRVEYIETTPSVPLLSHIRIVSFMVFLLTVDCLFLSNSLRSLIQKQEASVAIFFSFEYM ILATSTVSTFVKYIFYVSDMLMEGQWEKKAVYTFYLELISDLVHLSLYMLFFIAIFLNYG VPLHLIRELYETFRNFRIRIADYVRYRKITSNMNERFPDATSEELDVSDATCIICREEMT TAKKLLCGHLFHVHCLRSWLERQHTCPTCRAPIIPADNGHAVSARQHGAQAGVQPGKAAA GTATPSSEGAPGENMSRHQAKLEAAAAAASLYGRSFVYPPANTLKRYVSEVV

Transcript Sequence

Transcript ID	Zm00001d052566_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:193332151:193334983:-1 gene:Zm00001d052566 gene_biotype:protein_coding transcript_biotype:protein_coding description:ERAD-associated E3 ubiquitin-protein ligase HRD1A
Sequence	CAGGCCCAGGCAAAACAGCCCCGGACCGCGTGCGTTTCGCTTCCGGCTTCCGCCCCTGCT GTTTCTTGGCGTTCACCCCCTCTTTCTCTCGTGGCGACGACGGCGACCGTCGCCGCCCCC CTACGCGCTAGGTGCCAGGGTCCGTCGGGTCCTTCGCTGGCGACGAGCACCTACCAGGCG ATCCAGTGGTGTGTTTGGGAAGGTTTCCGCGGTCGGGCGGCGCCCCCCAGTGGCGAAGAT GATCCGACTACCGACGTACGCAGCGTTCAGCCTGCTGGCGACGGCGTCGGCGGCGTACTA CGCGTTCAGCAGCCGTGAGCAGTTCTACCCGGCGATGGTGTACCTCTCCACCTCCAAGAT CTGCTTCGTGCTGCTCCTCAACACGGGCCTCGTCGCCATGTGCGTCGCCTGGCAGCTCGC CAGGCGCCTCTTCCTCGGCTCGCTCCGTGAGGCCGAGGTTGAGCGCCTCAACGAGCAGTC CTGGCGGGAGGTCATCGAGATCCTCTTTGCTGTCACCATCTTCCGACAGGATTTCTCTGT TTCCTTTCTTGCCATGGTTGCTGCGCTTCTCCTCGTCAAGGCGCTGCACTGGCTTGCACA GAAGAGGGTCGAGTACATTGAGACCACGCCCTCTGTGCCCTTGCTCTCGCACATCAGGAT CGTCTCCTTCATGGTTTTCCTGCTTACCGTCGACTGCCTCTTCCTGTCAAACTCGCTCAG GTCACTCATACAGAAGCAGGAGGCGTCCGTTGCCATCTTCTTCTCCTTTGAGTATATGAT ACTAGCAACATCCACAGTATCAACATTCGTGAAGTATATATTCTATGTTAGTGACATGCT AATGGAAGGTCAATGGGAGAAAAAGGCAGTGTATACATTTTACTTGGAGCTCATAAGTGA CCTTGTGCACTTGTCATTATACATGCTCTTCTTCATAGCTATCTTCCTGAACTATGGTGT CCCGCTGCACTTGATTCGTGAGCTATATGAGACTTTCCGCAACTTCAGAATTCGCATTGC AGATTATGTGCGCTACAGAAAGATCACTTCCAACATGAATGAACGCTTTCCAGATGCTAC ATCAGAAGAGCTCGATGTGAGTGATGCTACATGTATTATTTGCCGTGAGGAGATGACTAC AGCAAAGAAACTGCTCTGTGGGCATCTGTTCCATGTGCATTGTCTAAGGTCGTGGCTAGA ACGCCAACACACTTGCCCCACGTGCAGAGCTCCAATCATTCCCGCAGATAATGGACATGC TGTATCAGCACGACAACATGGAGCCCAGGCTGGGGTTCAGCCTGGAAAGGCAGCTGCAGG TACTGCCACTCCATCCTCAGAAGGAGCACCAGGTGAGAACATGAGCAGGCACCAAGCAAA ACTTGAAGCTGCTGCAGCGGCAGCTTCTTTATATGGAAGGTCTTTTGTTTATCCTCCAGC AAACACCCTAAAAAGGTATGTTTCTGAAGTTGTCTAA