Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d052495_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:4:191453257:191461522:1 gene:Zm00001d052495 gene_biotype:protein_coding transcript_biotype:protein_coding description:AT-hook motif nuclear-localized protein 1
Sequence	ATGCAGATGGAGGGAAGGGAGGGTATTGCAGTTGGCCGCGAATCCGGCCACGGCAGCATG TTCAGAGCAGCAGACATCGCCATGGCGGAGGCGCAAGAAGCAGCAGCGAAAGGCTACCAG TCCTCTCCATCCTCGCCGTCGACGTCCCCCACGCCGTCGCCGCCAGCGGCTGCGGCTGGC CACGCCGGGGACGCCGCCGCGACTCCGCTTGCCTGGAGCTTGGGCGGCGAGACGCCGAGT GGGGCCGTGGTGGTGGACAACGGCACGCAAACGGCCGGGCAGAGCGAGCACGCCAGCCTG AGCTCCGGGCGCCGCCGGGGCCGGCCGCGCGGTTCCGGGAGGCGCCAGATCCTAGCCACT CTAGGGGAATGGTACGCGCTGTCAGCCGGCGGGAGCTTCACGCCTCATGTCATCATCGTG GGTACTGGGGAGGATGTGGCGGCGCGCATCATGTCGTTTTCTCAGAAGGGTCCACGCTCG GTCTGCATCCTCTCTGCCAACGGGTCAATCTCTAATGTAACACTGAGGCAGCCGGATGCA TCTGGGAGCACCTTCACCTACGAGGGCCGTTTCGAGATCCTGCAGCTGATGGGCTCCTTC ACAATGGCCGAGGAAGGCCGGAGGAGAACCGGCGGGCTGAGCGTCTCTCTTGCTGGCCCT GACGGCCGCGTAGTCGGCGGCGTAGTGGCTGGGATGCTGCGTGCTGCAAGTCCTATACAG GTGATCGTCGGAAGCTTCCTGCCCAACAGCCTGAAGCAGCACCAGAGGAGGAGGATGAGC ATGCAGCAGCCTTCCCCCGTTCCGGCGTTACCAGCACCCGTGGCACCCCCGCCGCCGGTG CTTACCGCGGCCACCCCGATCTCGCAGGCAGGTCCCGGGAACGGGTTCCACGCACCGCCG CCGCCGCACTCCGCAGCACCTCCCCAGCCCCACGCCAACGCCATGAACCTGAACGCGACG ACGACGGGCTTCACCATGGTCGGCTGGCCTGCAAGCTCGCCGCAGCCCATGGCGTACAGG GCTTCACCTGACATCAACGTCAGCTTGACTCCCCAGGAGTAG

Peptide Sequence

PEP ID	Zm00001d052495_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:4:191453257:191461522:1 gene:Zm00001d052495 transcript:Zm00001d052495_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:AT-hook motif nuclear-localized protein 1
Sequence	MQMEGREGIAVGRESGHGSMFRAADIAMAEAQEAAAKGYQSSPSSPSTSPTPSPPAAAAG HAGDAAATPLAWSLGGETPSGAVVVDNGTQTAGQSEHASLSSGRRRGRPRGSGRRQILAT LGEWYALSAGGSFTPHVIIVGTGEDVAARIMSFSQKGPRSVCILSANGSISNVTLRQPDA SGSTFTYEGRFEILQLMGSFTMAEEGRRRTGGLSVSLAGPDGRVVGGVVAGMLRAASPIQ VIVGSFLPNSLKQHQRRRMSMQQPSPVPALPAPVAPPPPVLTAATPISQAGPGNGFHAPP PPHSAAPPQPHANAMNLNATTTGFTMVGWPASSPQPMAYRASPDINVSLTPQE

Transcript Sequence

Transcript ID	Zm00001d052495_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:191453257:191461522:1 gene:Zm00001d052495 gene_biotype:protein_coding transcript_biotype:protein_coding description:AT-hook motif nuclear-localized protein 1
Sequence	AGCTAGCACTAGCAACGTCACATTCGCATGGAGATGTGGTCATGTGGAGCCGACAGATGA TGGCCTCGGCACCGGCGGCGCCGGCGACATCGACCGATCTCCTCGTCGTCGGCCAGTAAC ACGCATTCTCTCTCCCTGCCCAGGTTAACACTTCTCTCTACCCATGTTCTTTTTTCGTTT AGGGCAAAATGGTAGGTTCTCTGCCTGCCTTGTGATTTAAGAAAGAATATAAGGAAGGGG TTTATGAAGAGGGGAGGTTCCATTTTTCCAATTGGAAACAAAAACTGTAAAAAACAGAGA ATCAAATCGACAGACCAACCTCGCCTACTACTCTCCCTGCACATATGCTCGATGCAACTT TTTCAGTTGTTGTGGCTGTTGGCTGTGGATGCAAGAAAATAACTAGAAATAGCTGCAACT GCAGCCAAATAAGCTGCACTGATGCAGCGACAGTCACCGTACCATGTTTAATTTTAATAC AGGACCTTGTTTTTTCTCATCTCCTTTTTCCTGCGTGCATCAGCAGTTCAGTGTATGCAG CCCCTGATTACAGCAATTTATCAGAGGTTGGCTGGGACACGCGGCAGGACTCGCCCTGTC GTTCGTACGTTTATACCATCTAAATCTTGCCCTAGCAAATGCTGTTCGTTCTAAGCATTT CATTCCGAGATTTTCTCGCAGATTTCTGGCGCCGTACTGAGCATTATTATGTTCTGCTTT GATTTTTTTTTATTGTGGTGTTCGGCTTAGTCTGTAGTTATTGCTTGCAGGGTCATAAAC AGGGAATGGTCCAATGCTGAATTCATGATGGTAGCATGTATCTCCTTTTTTCCTTCTTCT TGTAGTGCTAATTAACATAGATATGAGATAAGATAGGCGCATGCGCATGCGGCATGCCTT CAGTTTATCTATGTTTTCTCACATGTTGCTTGTATTGCGCATTACGGTATGACCTTTAGT GATCACCCTTATGCGTCAGACCTCAGCTACACATGGTTCAGTTTCTGATTTTGCTTCAGC TCCAAGAGACCCCTAACCTTGAACTCTTCATCTGTATATATGTCTGATAAGAGTTGCTAG AAAAATCTGTCCTCTAGCCAAGGCAGGAAAAAAAACTTTGCTCAGTATTTCCAATGGCCA ATAAGAAATTTCAATCTAATCTTAGTCAGCTGTCCTGAATCATCAATAAAAAGCTGCATC ATGGTCCTCAGGCCACATATAATTGCCATATCAATATGGTGTCAGTGTTAATGTAGGGGA TCTTGCTCCATTGAAGCCACTCTGTAAGTACACGTAGCGTGTGAATGCATTTGAGTCGTT TAGACAAATGTTGTTAGCATTTTGACTATTGCGTGTAGTTCTGGAGAAAAGTGGGCAAGA CCTTTGGTTTGTCATGCAAATGTTTGAAAACAAATCAGAAAACTGTACGTACCACAGTTT TATATTTATGCCCAATATGACATTGTTATGATGCAAATCAATTCCCTTTCTATTTTTCTA AACTACGACACTATTAAAGAAAATATGCATCTTCGTCTCATGTCTATAAGCATCAATAAT ATTTGTCTGTTAACAACATGGTGCATCCTTTTATATAATCATGACAGTGTAGTTGAATGC CGACAAGACATGGAACTCAATAGTGTAATACTTGAGATATTGCCATTGTTTCGCCTACTC TAATAGATTGTCCTGCTGCTTGTCCAGTCTGCTAGATCGCATACATTAGCTCCAGTGTAC AATTTCTTGGCAACGTGCAAGGCTGGTCGTATCACAAGGTGTTTTGCCAGTCAAATAAGT GTGAACATATAAATCTGTTACTTCATACTAAAGTGAGCTCCATATGCAATAGAATATGTA GTATCCCAACTTTCCCTACCATGGAGGGGAGATGAAAGAGAATAAGTGGTGAATACTGTT TATTTATTTCTTGATACCGGATGCAAAAATAAACAACATGTATTAAAAATGTTTTAACCT GACAATTACTCTCCGTTCCAAACTATAAGTTGTTCTAACTTTCATAGAGTCAAAGCATCT TAGGTTTCATCAAAATTATAGAGAGAGTTCTAAAGACTTATAGCATCAAATGGTTATATT ATGAAAATACAATTAATAGAGAATCCAATAATATTATTTGTTACCATAAATGCTATTATT TTATTATATAAATCTGGTCAAATTTGAGGCACTTTGATTCTCTAAAAAAGTTAAAATAAT CTATAATTTAGAATGAATGGAATATATATTTTTCTCCTTCTCTCTCATTCTTCAGTCTTG ACCTCCTTAGAGCTGTCCTCAGTCCTCGAAAGGGTGCCTTGAAGCCCATGTGCATGGGTA GATTAGGTGGCATGTATATTATTTGGCAGTCTAAGAATAGAAAAGGTCCTCTAGGCCTGA GAGTCCTCTGCTGGTTTTACTTTAATTATAATCTGGCAGCTTTAAATCTTGGCTCCTGTT TTGCTTTTACCTGTTTATCATATTGAAAGTTGTGACACAGGAAAGGGCGCGTGAGCTGCT TTCCCTTTTCTCCCATTTGTTTTATTCTTACAAGGAGCCTGCAAAAACGTTTGATGCAAG AATGCCCCATTTGTTTTGGCCTGATCACATGGCACCACTATGATGACTCTTTAATCAAAG CCTCATCGATAATCAACTCTGTTATACTAAGCCTTGGGAGGCGAGTTTTTGGTTCCTTGT GGGTGCTTTTGAAGCAAGTACAGCTATTCATTAACCCGCCCAAACTTATTATCTGACAAT AAGGTATATATACACACACATATAGAATTTCGTATTTTCCTTCGTGACTACAAAGTACAA GAAATGGATTCTTGAATCCATTTTTTTTTTTGTAAAAGAATGTTTTTTAGTGATCCTTCA GCATTTGAACTCAGCAAGGGTGCTCCGAGCCACCAAATGTTTGAAGTAAAAGAAGGCGAG GAACTGAACGGTCTCGGGAACTATTTTCTTTGACTCAAAAGAAAAGAGAAACTACTTTCA AATAATGATGACTATCAATATGATCATGCTAATGGTTAGTAAAGTACTATGACATATGGT TAGTAAACTTCTGATGCCCATGTTACCTATGCAGCTCTTTGCTTTCCGGCCAGACTTACG GCGTGCCAAACTTGTTCATCTGTTCCTTCAGTTCATGTTCATGCCGTTTCTTGCCAAAAG TCTAGCGTTGAAAAAAAGCGCCGCACTCTGGAAACGAAGCCAACAGGCTCCAACTGGACA AGATCCGGTCTTTCTAACACCTCTTGTGCTACTAAAGACATCCCACTCTCTCACCTTGGT AATAAAGTGACACCTTTAATTTGGCAAAACATTTTTCGTAATGGGTATATGATCAATTTG TGGGGTATTTGTTTTTTTTCGTTTTGGGTGTTCTAGTTTACTCAGAACCCATGATCACAT ATCTTAAGGTGGCGGTAATTAACCTATTTGTAAGACGTCATGGCGTCATATATGCTGCTT TCCTGCTCTAAGTTTTTTTTTTGCTGCCTTGATTTTGCTGTCAACTTTGTTTTACCTCTC CGGCGATTTAAAGTGTAGTTTTCGTAGTATTTAGCAATCAGGCACTCCAACAGTGCCCTA ATCTGTGTAACAAATAATATTTAGCACTTCAAATCTCTCAGTGCTAGTTGTCTTTCTTGC TGTCTTGTTGTTTACTGAACTAATAAGGACAGGAATAAGCTGTCAGGTTATATTAAAACT CAATCATGCTGTATTTAATTTCTAAACTTCCCTTAACACTTATAGTGTATATTCTTATCT ATTTTCATTTTTTTGAAAAAAAGTATTTTCTCTTCATAGTTTATACACTGTAGTTTCATT ATTTCATACTACACTCTGCTGTTTTTCAAGGGCCCACACTTTTGTCTGGATCTTCCTTTT ATGGTTCGAGAGACTTGGAGTCATATTGTTAGCAGTAGCATTACTTTTGTTTTCTGACTG ATGACACCCATATTAAAATCCATCGCATAAAACTATTGCCTTGTCTATTCATGCACCCAT TGTTTTATGACAACGAGGGTTTCAAGCTTTCACAGTTCCAGCAGACACCATTAATTTGAC TGTCTTTTTTATTTGCCTTTTGAATTTACTCTCCAGCTACTGATTTCCCAAAAGGCCCAA GCTTCGTTCTTATCCCCTCAGTCAGCTGGACAGCTGTGTGCATGGCAGGCTGTAGTAGTG TCCAAGCAAAACAGGCACAGGTTCAGGTTCTGCAAATTTGGGTACGCGTGCTTGTTATTT TTTTTCTGCACTGGTATCCCCCCATCTCCTAGAGCTTTTCTTGAGAAATTAAAGAGGGAA GGAGTAACAAGAATCTGGCTTTTTACGTGAGTTTGAAGGTTCAAAAAAGAAGATGAACAT TGGGAAAGCTGCATAAAAAGATAGGAAATGAAACGCTTTATTAGGTCCTCTAATGGGTAT TACTAACAATACTAATTGTATAATTGTCACATATCAAAAATGAAACAAATCAAGCAAGCA AATGCTACTTTTATATCTCAATTAATTACCATTTAGAATATATGCTACCTTTTAACTTGT ATAATATCAGTTGTTAAGAAAATCAATTATTGCTTTAAAACGAATAGTTACATTTTTCAT CATTTCACATGTACCTTATTGCAAAAAATGAGATAACCGGAAGTGTGCAGTGTGGACATA GTGATTTCAATTGCAAGCTGCATGGTACAAACCCCAATGTGATTCCTTTTCTCTCACCAG CTGGATCATCCGTTAAATATATCAACATGCAATAAAGGAGAAAAGCACAGAGTATTCATT CAAATCTGAGTTATCAACTTACCATGTTGGTGATTCCTTAAGAAAAAAAAATTATTCCCA TTTTACTTGTACTGGACACTCAATTTAGAACTGCTGTTCTTTAAAGCGTATTTTCATAGT ATATCCTATATAAATTTCTCGGGAAAAAAATGTTTGTCCCATTCGCTGCTTTACTGTTCA ATAAAAAAGTGAAGTTATGTTGGGCTGCAGTGCAGGACACTTTTGCAGTCCAACCAATCA GATGGTTGGTCAAAGGAGAGAGCTAGAGAGGGAGAGAGAGAGAGAGGCGGGATCGCAGAG CAGCAGAAAGCCCGCCATTCTCGTGCTAAAAATCTCTCATTTATTTTTATTTATCTCTGC CATTTGCCCGTATTCAAAATCCAATCCCTGATGACTTGGGTATAATACTGGCACGACCCA GCTGCTGCTTGCTGGTGCCTGGTAGTAACCGGACACAGACCCAAACTAGAATAGGTGTCT GTTCTTGTCTGCGGTTCTCTGTTCGAGTCCAAGGCTCCAAGCAAGCAAAGAACCGAACCA CCGGGAGCAAGAAATTTTCCCAGAGTAAGCAAGTCCCAGGACTCAACCAAGAAGAGCCCT TTGCATGCAGATGGAGGGAAGGGAGGGTATTGCAGTTGGCCGCGAATCCGGCCACGGCAG CATGTTCAGAGCAGCAGACATCGCCATGGCGGAGGCGCAAGAAGCAGCAGCGAAAGGCTA CCAGTCCTCTCCATCCTCGCCGTCGACGTCCCCCACGCCGTCGCCGCCAGCGGCTGCGGC TGGCCACGCCGGGGACGCCGCCGCGACTCCGCTTGCCTGGAGCTTGGGCGGCGAGACGCC GAGTGGGGCCGTGGTGGTGGACAACGGCACGCAAACGGCCGGGCAGAGCGAGCACGCCAG CCTGAGCTCCGGGCGCCGCCGGGGCCGGCCGCGCGGTTCCGGGAGGCGCCAGATCCTAGC CACTCTAGGGGAATGGTACGCGCTGTCAGCCGGCGGGAGCTTCACGCCTCATGTCATCAT CGTGGGTACTGGGGAGGATGTGGCGGCGCGCATCATGTCGTTTTCTCAGAAGGGTCCACG CTCGGTCTGCATCCTCTCTGCCAACGGGTCAATCTCTAATGTAACACTGAGGCAGCCGGA TGCATCTGGGAGCACCTTCACCTACGAGGGCCGTTTCGAGATCCTGCAGCTGATGGGCTC CTTCACAATGGCCGAGGAAGGCCGGAGGAGAACCGGCGGGCTGAGCGTCTCTCTTGCTGG CCCTGACGGCCGCGTAGTCGGCGGCGTAGTGGCTGGGATGCTGCGTGCTGCAAGTCCTAT ACAGGTGATCGTCGGAAGCTTCCTGCCCAACAGCCTGAAGCAGCACCAGAGGAGGAGGAT GAGCATGCAGCAGCCTTCCCCCGTTCCGGCGTTACCAGCACCCGTGGCACCCCCGCCGCC GGTGCTTACCGCGGCCACCCCGATCTCGCAGGCAGGTCCCGGGAACGGGTTCCACGCACC GCCGCCGCCGCACTCCGCAGCACCTCCCCAGCCCCACGCCAACGCCATGAACCTGAACGC GACGACGACGGGCTTCACCATGGTCGGCTGGCCTGCAAGCTCGCCGCAGCCCATGGCGTA CAGGGCTTCACCTGACATCAACGTCAGCTTGACTCCCCAGGAGTAGGATCGCTGGGCTCG TCTTCTTCCTTTTTCTTTCTTTTTTTTTTCTTTCCCTGGGCTGACACGTTTTGGGTGGGA GAGAGGAAACAGAGCGTGGCTGATGCTCTGAATGAGATTATGGACTAATCTGGTGTTAAT TTTAGGGTAGGGCGTGCCAACTTGTTTGGGTTGCTGCTTTCGGCCGTCATGGCTGTGGAT GTTGATTTAGTTCTAGTTCTAGTCAGTCAGTCCTATTCAGTTTCTGTCTTTCTGCGCTGC AGCTATTTAGCATGTCCTGTTATTGGTGAATCTTTTCTGATGATAGAGGGAGGAATCATC TTCTGATGACAGAGGAATCAGTTCTGTT