Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d052488_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:4:191183827:191190388:1 gene:Zm00001d052488 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCGAGCGCGGATCTGCTGCGGAGGGAGGAGGAGTTCTACTCCTCCCTGTTTGATTCC
GCCAAAGGCGATGGCGCCAGGTCGCGCTCACAGCTGATCGAGAGGAAGATCGAGGCCCTG
GAGGACATGGCCACCAGGGTCAGTAACCGGAGATCGCGGAAGTGGTTTAACGACCGTTTG
CTGATTGAACTCGTCCCGCGTCTTTACGTTGAAGAGATCAAAGGCCTATTCGCTCCTCCG
CCGTGGGGTGAGCAAGTGCCCTTGTCAGCATTCTACAGGGCAAATGTTGGTGAATGGGAT
TCCTTCAGGAGCATTGACATGGATGCTGAGGCAAGATTGATGCAGCATATGAAAAAATCA
TTGGAAAAACCCAGGAATCATGTCGATGAAGGGGAATCGATTGCGCTGAATGCTTGGCAT
CGAATAGATCGACACACTAGAGAAGCAATAAAGAGAAATTTCCTTCCTGATCTGCTTGGA
ATATATGAAGAACGCGTTAGGGCCTTCATTGAAGACGCTAGTGACAAAGATGCTCTTGTG
CTGAATGTTCAGGACCCATTTCAGAGACTACTGCTCCACGGTGTTTGTGAGTTCTACAAC
GTGAGCTCGACAACCACCAGCAGTGTGAGAGAAGATGGGAGGCCTTGGAAGGCAACCACC
ATCAAGAAGAGGCAGGGCACCGGCGTTCCCTCTAGAATCACACTAGTTAGCTTTCTGAGA
ATGAAGAAGAATGGATCGCAGTAA

Peptide Sequence

PEP ID

Zm00001d052488_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:4:191183827:191190388:1 gene:Zm00001d052488 transcript:Zm00001d052488_T002 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MASADLLRREEEFYSSLFDSAKGDGARSRSQLIERKIEALEDMATRVSNRRSRKWFNDRL
LIELVPRLYVEEIKGLFAPPPWGEQVPLSAFYRANVGEWDSFRSIDMDAEARLMQHMKKS
LEKPRNHVDEGESIALNAWHRIDRHTREAIKRNFLPDLLGIYEERVRAFIEDASDKDALV
LNVQDPFQRLLLHGVCEFYNVSSTTTSSVREDGRPWKATTIKKRQGTGVPSRITLVSFLR
MKKNGSQ

Transcript Sequence

Transcript ID

Zm00001d052488_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:4:191183827:191190388:1 gene:Zm00001d052488 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATAAATATAGCTTGGAGCAAATCTTTCAGCCACCCGATCCCCAACCGCCCGGCCCGACAT
TCCCTCCAACCGCCGCTGCGGCTGCGCCGCCCACCGCCGACAGGCGACAGCATCGACAGG
CGCAGCAGTCAACAGGAACCGAGCCATGGCGAGCGCGGATCTGCTGCGGAGGGAGGAGGA
GTTCTACTCCTCCCTGTTTGATTCCGCCAAAGGCGATGGCGCCAGGTCGCGCTCACAGCT
GATCGAGAGGAAGATCGAGGCCCTGGAGGACATGGCCACCAGGGTCAGTAACCGGAGATC
GCGGAAGTGGTTTAACGACCGTTTGCTGATTGAACTCGTCCCGCGTCTTTACGTTGAAGA
GATCAAAGGCCTATTCGCTCCTCCGCCGTGGGGTGAGCAAGTGCCCTTGTCAGCATTCTA
CAGGGCAAATGTTGGTGAATGGGATTCCTTCAGGAGCATTGACATGGATGCTGAGGCAAG
ATTGATGCAGCATATGAAAAAATCATTGGAAAAACCCAGGAATCATGTCGATGAAGGGGA
ATCGATTGCGCTGAATGCTTGGCATCGAATAGATCGACACACTAGAGAAGCAATAAAGAG
AAATTTCCTTCCTGATCTGCTTGGAATATATGAAGAACGCGTTAGGGCCTTCATTGAAGA
CGCTAGTGACAAAGATGCTCTTGTGCTGAATGTTCAGGACCCATTTCAGAGACTACTGCT
CCACGGTGTTTGTGAGTTCTACAACGTGAGCTCGACAACCACCAGCAGTGTGAGAGAAGA
TGGGAGGCCTTGGAAGGCAACCACCATCAAGAAGAGGCAGGGCACCGGCGTTCCCTCTAG
AATCACACTAGTTAGCTTTCTGAGAATGAAGAAGAATGGATCGCAGTAACGTTAGTTAGC
GTTCAAGAATACAACAAAATTGCTTTAGATTCCGTTTAGGCTGTTGCAAGACAAGTGAGT
GGTCACTGGCAATGTGTTCTTATATCGCATCAGCCTGCTGGCTACGGTTTGGAACTTCCT
GACAGAAAGTAGAAACTTCCGGTTCTACAATCTTTGTGCGGGAACTTACCTCAACACATC
GCAAATGAGTCATTTTCTTCGATACAACCCGATAATTCAACTAATTAACTCATCCCAACT
CGCGCCATAGCTAGAGATTCAACTATAATAACTTGCCCCAACTCGCGCCATAACCATTGG
GTTAAACCCATTACCTAAACCCATGTAAGACCTTTGAAAGATTTTATGTACACTAGAGTG
GATTCGTTAGTGTGTTTGGATTGAAACAAACACCGAAACATTTCACTAGCTGATTCATGA
ATGGGTTTAAATTGTCTAGATATCTAAAGCCGGATCCACATGTGAGCCTCACTTTAGAAG
TCAGACCCTAAAATTAAAGCCTCAAGTTTAAACCTTAATTTTTTCACAAAATCAATTGAA
TTTTGTTGGAAATAGCTAAGAATAATAATATACTAATTTGCGTGTGACAGTGTAGCTAGA
TCTACGTGTAGACCCTACCTTAGAAGTCGGACCCTAAAATTAAAACATCGTGTTCACACT
TTAAAATTGTCACAAAATTAATAGATTTTTTGGAAATAAGTAACCATGATAAACCTGCTA
ATTTACATGTAACAATGTAGCTAGTTCCACGTGTAGGTCTCATCTTAGAAGCCAAACACT
AAAAATAAAACATCACGTTCACACTTTAAAAATTTCACAAAATTATATATTTTTTGGAAA
TGAGTAAGAACGATAATATGCTAATTTGTGTGTAGCAGTGTAACTGGATCCATATGTAGG
TCCTACCTTAGAAGTCGGGTCCTAACATTAAAATCTACTGTTCACACCTTAAAATCTTTA
CAAAATCAATTAAACTTTGTTAGAAATAGCAAAGAACCAAAGAATGATAATCGACTAATT
TGTGTGAAAAGATGTAGCTAGAACCACAACTCCACTTTAAAAAACACGACCTTAAAATCA
AAACCTTGCATTTGCTTCTTAAATTTTTTACGAAATTAACCAAGGTTTATTAGAAATGCC
TTAGTTTGACATTCAATTAAACTGTATGAAATCTAAAAGATCCACACATAGACCATAGCT
TAAAAGCTGTGCTCGGTTACAATTCTAGCATGGGGTGAGGGGCATATCTGATAACCCATT
TCAACCGACTTCTTAGCAAACCTGCACAAATCCGTCTCATTTGGCTCTAAAATATATTTC
CACCCATCCAAACAACACATGTATTGATACCCACACATAAAACCCATTACAATCCAAGCC
ATTAGTAGGCCTATGGGGATCTGGTGTGGAACTATTTTAGGAAATAAATTTAGACATTTT
TGTTTTGTTTTGATGAAAGCTAGTAATGTTTAATAGAGTAAGTTATAGAAGTTTGACCGA
ACACGAATGATTTGCGAAAGGAATGGGCCAGTATTGTCACTTAAACAACGTTACAAAACT
GCTAGAAGTGTAGTAGTAGTTTTACATTGTTGAAGGTAAACACAACAAATCCAAATCCTT
TGAGGATTATTGTTATTATTTATAACTCTGCTACAAGTAGATTGTTTATGTACATCTGGA
TCGAGCAGAGGGCAACATTTTTTCACACATGGCTCCACTAGAGACGGAGGCAACATTTTT
ATGAGTAACTTTTCGAGCAACTAGATTCCTAGATAGTCAAGCTGCCACAAAAATCTAGAT
ATCGAGAGCTTGTGTGCGGAAGAAGACGAAGGATTCTACACGGTTTAGGGTTTAGAAAGC
GACGGATTCCTCGTATAGCGACGAATTCTACGTTCGCAATGATTTAGATGATTTTCAAAG
AAGCGTGTTAAAAAGAGAAGCGCCGCCAGAAACTGAAACCGATTCTGACAGAAAAAATCT
AGCCAGAAGCAAAAACAAACAAGCCCTAGTCGCATGTTGTATTATTTTTATAAATATTGT
GTTATAGTTGTTGCACAACCCAACAGCTAAGCTAAAAGGCTTAGCTAGATATCTTAAACA
CCGGTAAAAAGCACCTTGATACCTGGTTTAAATACTCTCGTATTCATCTCAACACATGTG
GCCTGAGATGAATATGAGTGTCCAAACAAGATCTAGAGGTGGAGGCTAGGGAGTATTTAT
AACACGCTCAAACAAAACTAGTTGTTGCCCTGCTACATACACATGCTGGACTGGTCCTGT
ATGCACCGTAGTTCCTGTTAGCTACGGAAAAGTTCCCACCCTGAAAATGTTGGCAAAATG
TATCAATCTAATTGAGGTACCACTGCTCGAAAATTCCTTAAACCAATCCAGTATCGCCAC
CCACAACAAACTCTGTTAAAATCTCGTGGCACTCTCAAAAACCTCGTATGGATTGAACTT
CAGCACTTATAGACAATCATGTTGCATCTCTCTTAATAGTACGGCATACCTATCAGCTCA
AGTTTAGATGAAAACTGAATTCAAATCTCTTGAGTTATACTCCATTGATCAACGCCATAA
CTTTCAATCTTCATCATACAGGATGCCAACATATTCATCTTGATTGTAGCTTGAGCATAG
CCATCTTGATCATGTGATTTGATCCAATTCAATCCATATGAATTAATCTAATGGCATGAA
ATCAGTTTCTTCAAATGATCCAACAATGATTTAATCCTCCTCACAATATAACTTCTTCTA
ACTTGAATAGTGAAAAACTAAATGCAAGCACTTTCTTCTTCACCACAACCATGTCCTTCG
TTTCTATATGCCCAAGCCGTCGCTTTTCCTTTATCTTCACTTGGTCCCCACGGAAGCCAT
TTCCTTGCTACCATCACCCTTTCAAGCCATTCCAAGTCATATGAGTTTTTAATCGATATT
AATCATACATTGAAATCCATATAGTGAAAACCATTTTCATCAATATTGATTTTCTTGAGC
GAGCTCTCTAAATAAGACCATTACATATGCAAGACATCATGTCTCCTATAACCAACTCAA
ATATACTTACTCTCATTTGACACTTAAATATCCCATGATATACAAGCCATTTCATTTGCA
TTGATATCTTTTGCTTCAACTAGATTGTCTTCACAATAATAAATCAGTTTGGCTTTTCAT
TTCACCATAATCTAAAACATCATTAAGGTTGCCTTTATAATTGAACCTTTGATATACATT
AAATGATACAAACATCTCATATTAAGTGTATGTAATATAATCAGTTACCTGTTCAACACT
TAACAAACTTATTAGTCCTTTAATTGTGTTATTATTCAATCATCTAAAACCAACTAAATA
GCTAGATGCACTTGCATAAGATAACTTTTTAATCCTTTTCACCCAACTTTTGACTTGTTT
TGACCATTTTGCACATGTGTTCATTTGAATTATCACCTCATTCTCTGGAAGCTCAATATA
CCTGGAAGCTCAGTAGCTCTGGCACCCAGTGGCGGAGGGTGACTTTTAGATTTCATATTT
CCTAGCACCAATACAGGTCTCATCCTCATTGTTGCCCGGCAATGGGTGAGATATTGCGGC
TGAGCAGCTGCCATAATTGTCCACAGTTTACTGTATTTCTACAAGGGTCTGCACTTGAGA
ACTCTACTACTGAGTACAAAAGGCTAGGTAGGCATGGTGACAAAATAGACCACATATCTG
TGTATAGTGAATTCCTTTTCAGGACCATTAGGTTCACTCCATGGAAAATGATTTGGCAGT
CTTGGCCCCTCTAAAGGCGCAAGATTTTCATTTGGTTTAAGGTCGTGAATTACTGTTGGA
CTGCTGATAGGCTATCAAAGCTGGAACACTACCACATCCAACAGCATGTCCACTTTGTGA
TAAGCCCCAAAAATCATTAACTATATGCTGATTTCATGCGTGGTCACAATTCACAAGGGA
AGTCTAGTGGTTCACTGTTTTTCAGAAATTTGGTTTGCATACACCTCCCACCAGAACAGG
ATGTTAATTCTTTCTCAGGATCGTGAAATGAAGGGTTTAGGCAAGGAGCACCAGGGAGGC
ATCAACACTTTTGCTCATTTTCGGCGTTTGGGAAATCTGTAAACACCACCGTAACAATGG