Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d052472_T012
CDS Infomation	cds chromosome:B73_RefGen_v4:4:190781641:190787238:1 gene:Zm00001d052472 gene_biotype:protein_coding transcript_biotype:protein_coding description:2-isopropylmalate synthase B
Sequence	ATGGCCTTCAACGCTAAACCCTACTGCTCCACCACCGCCAAACCGCCCACCCCCGCCGCC CACCGCTCGCCGTCCGGCCCGTCCCCCTGCATCTCCGTCCGCGCCGCCGCCGTATCCCCC CGCGCCCGGCACTCAGCCTATGGCCTCTCCGCCGCCGGCAACGCGTCCTCCAGCACCGTC CGCCTCCGCGCGCTGGCCCAGCGCACCCGGGCGCAGCCGCAGCCTCCCCGGCGGCGGCCC GAGTACGTGCCGAACCGCATCGACGACCCCAACTACGTGCGCATCTTCGACACCACGCTC CGCGACGGGGAGCAGTCGCCGGGCGCCACCATGACGAGCGCCGAGAAGCTCGTCGTCGCG CGCCAGCTGGCCCGCCTCGGCGTCGACGTCATCGAGGCCGGGTTCCCGGCCTCCTCCCCC GACGACCTCGACGCCGTGCGCTCCATCGCCATCGAGGTCGGCAACCCGCCGCCGGGGGAC GACGGGGGCGCCCACGTGCCCGTCATCTGCGGCCTCTCGCGCTGCAACAGGAGGGACATC GACGCCGCGTGGGAGGCCGTCAGGCACGCGCGGAGGCCCAGGATCCACACCTTCATCGCC ACCAGCGAGATCCACATGCAGCACAAGCTCAGGAAGACGCCCGACCAGGTCGTCGCCGTT GCCAGGGAGATGGTGGCGTACGCACGCAGCCTTGGGTCAAATCGAGAATTCCTGTACCAT ATACTGGAGGAAGTCATAAAAGCTGGGGCAACCACTCTTAATATCCCAGATACTGTCGGA TACACTCTTCCTTATGAATTTGGGAAGTTAATTTCTGACATAAAGGAAAACACTCCTGGA ATTGAAAATGCCATTATTTCCACTCATTGCCAGAATGACCTTGGCCTTGCAACTGCCAAC ACATTAGCGGGTGCTCATGCAGGAGCACGACAGTTAGAGGTGACTATTAATGGTATTGGT GAAAGGGCTGGAAATGCTTCATTGGAAGAGGTTGTCATGGCAATTAAATGTCGTGGGGAG CTCTTAGATGGTCTATATACGGGAATAAATTCCCAACATATTACTTTGACAAGCAAAATG GTACAAGAGCACAGTGGACTTCATGTACAACCACATAAAGCTATTGTTGGTGCCAATGCC TTTGCCCATGAAAGTGGAATTCATCAGGATGGGATGCTTAAATATAAAGGAACATATGAA ATAATATCGCCTGATGATATTGGTTTAGCACGTGCAAATGAATTTGGTATTGTTCTTGGG AAACTCAGTGGAAGGCATGCAGTGAGATCTAAGCTGGTAGAGCTTGGATATGAAATCAGT GACAAGGAATTTGAAGATTTCTTTAAACGCTACAAAGAGGTCGCAGAGAAGAAAAAGCGT GTAACTGATGAGGACATAGAAGCTTTATTGTCAGATGAGATATTCCAGCCTAAGGTTATT TGGTCCCTTGCTGATGTACAGGCAACATGTGGAACACTTGGCTTATCTACAGCAACTGTG AAACTGATAGGGCCAGATGGAGAGGAGAGAATAGCATGTTCAGTTGGAACAGGTCCAGTT GATGCAGCTTACAAGGCTGTTGACCAAATAATCCAGTTTCGTATCGTCATTATAAAGCCA CTAAGACCCAGTGTTTACAAGGATTTGCATCGAATTTATCACCACCAGTTGAATTTCATG AGGAAGGATACTCTGATTCCAACCGTCCTCCGAGAATACGGCATGACTTCAGTCACAGAA GGCATTGACGCTATTGCGACGACTCGAGTGGTTGTCACCGGAGACGTGGCCAACAACTCC AAACACGCCTTGACTGGCCACTCTTTCAACCGCTCCTTCAGCGGGAGCGGGGCGGCAATG GACATCGTCGTGTCCAGCGTCAGAGCTTACCTGAGTGCCCTGAACAAGATGTGCAGCTTC GCTGGCGCTGCGAGAGCCAGCAGCACTGAGGTGCCTGGGAGCGCAAGTGTTCAACGCGCA GAATGA

Peptide Sequence

PEP ID	Zm00001d052472_P012
PEP Infomation	pep chromosome:B73_RefGen_v4:4:190781641:190787238:1 gene:Zm00001d052472 transcript:Zm00001d052472_T012 gene_biotype:protein_coding transcript_biotype:protein_coding description:2-isopropylmalate synthase B
Sequence	MAFNAKPYCSTTAKPPTPAAHRSPSGPSPCISVRAAAVSPRARHSAYGLSAAGNASSSTV RLRALAQRTRAQPQPPRRRPEYVPNRIDDPNYVRIFDTTLRDGEQSPGATMTSAEKLVVA RQLARLGVDVIEAGFPASSPDDLDAVRSIAIEVGNPPPGDDGGAHVPVICGLSRCNRRDI DAAWEAVRHARRPRIHTFIATSEIHMQHKLRKTPDQVVAVAREMVAYARSLGSNREFLYH ILEEVIKAGATTLNIPDTVGYTLPYEFGKLISDIKENTPGIENAIISTHCQNDLGLATAN TLAGAHAGARQLEVTINGIGERAGNASLEEVVMAIKCRGELLDGLYTGINSQHITLTSKM VQEHSGLHVQPHKAIVGANAFAHESGIHQDGMLKYKGTYEIISPDDIGLARANEFGIVLG KLSGRHAVRSKLVELGYEISDKEFEDFFKRYKEVAEKKKRVTDEDIEALLSDEIFQPKVI WSLADVQATCGTLGLSTATVKLIGPDGEERIACSVGTGPVDAAYKAVDQIIQFRIVIIKP LRPSVYKDLHRIYHHQLNFMRKDTLIPTVLREYGMTSVTEGIDAIATTRVVVTGDVANNS KHALTGHSFNRSFSGSGAAMDIVVSSVRAYLSALNKMCSFAGAARASSTEVPGSASVQRA E

Transcript Sequence

Transcript ID	Zm00001d052472_T012
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:190781641:190787238:1 gene:Zm00001d052472 gene_biotype:protein_coding transcript_biotype:protein_coding description:2-isopropylmalate synthase B
Sequence	ATGGCCTTCAACGCTAAACCCTACTGCTCCACCACCGCCAAACCGCCCACCCCCGCCGCC CACCGCTCGCCGTCCGGCCCGTCCCCCTGCATCTCCGTCCGCGCCGCCGCCGTATCCCCC CGCGCCCGGCACTCAGCCTATGGCCTCTCCGCCGCCGGCAACGCGTCCTCCAGCACCGTC CGCCTCCGCGCGCTGGCCCAGCGCACCCGGGCGCAGCCGCAGCCTCCCCGGCGGCGGCCC GAGTACGTGCCGAACCGCATCGACGACCCCAACTACGTGCGCATCTTCGACACCACGCTC CGCGACGGGGAGCAGTCGCCGGGCGCCACCATGACGAGCGCCGAGAAGCTCGTCGTCGCG CGCCAGCTGGCCCGCCTCGGCGTCGACGTCATCGAGGCCGGGTTCCCGGCCTCCTCCCCC GACGACCTCGACGCCGTGCGCTCCATCGCCATCGAGGTCGGCAACCCGCCGCCGGGGGAC GACGGGGGCGCCCACGTGCCCGTCATCTGCGGCCTCTCGCGCTGCAACAGGAGGGACATC GACGCCGCGTGGGAGGCCGTCAGGCACGCGCGGAGGCCCAGGATCCACACCTTCATCGCC ACCAGCGAGATCCACATGCAGCACAAGCTCAGGAAGACGCCCGACCAGGTCGTCGCCGTT GCCAGGGAGATGGTGGCGTACGCACGCAGCCTTGGGTCAAATCGAGAATTCCTGTACCAT ATACTGGAGGAAGTCATAAAAGCTGGGGCAACCACTCTTAATATCCCAGATACTGTCGGA TACACTCTTCCTTATGAATTTGGGAAGTTAATTTCTGACATAAAGGAAAACACTCCTGGA ATTGAAAATGCCATTATTTCCACTCATTGCCAGAATGACCTTGGCCTTGCAACTGCCAAC ACATTAGCGGGTGCTCATGCAGGAGCACGACAGTTAGAGGTGACTATTAATGGTATTGGT GAAAGGGCTGGAAATGCTTCATTGGAAGAGGTTGTCATGGCAATTAAATGTCGTGGGGAG CTCTTAGATGGTCTATATACGGGAATAAATTCCCAACATATTACTTTGACAAGCAAAATG GTACAAGAGCACAGTGGACTTCATGTACAACCACATAAAGCTATTGTTGGTGCCAATGCC TTTGCCCATGAAAGTGGAATTCATCAGGATGGGATGCTTAAATATAAAGGAACATATGAA ATAATATCGCCTGATGATATTGGTTTAGCACGTGCAAATGAATTTGGTATTGTTCTTGGG AAACTCAGTGGAAGGCATGCAGTGAGATCTAAGCTGGTAGAGCTTGGATATGAAATCAGT GACAAGGAATTTGAAGATTTCTTTAAACGCTACAAAGAGGTCGCAGAGAAGAAAAAGCGT GTAACTGATGAGGACATAGAAGCTTTATTGTCAGATGAGATATTCCAGCCTAAGGTTATT TGGTCCCTTGCTGATGTACAGGCAACATGTGGAACACTTGGCTTATCTACAGCAACTGTG AAACTGATAGGGCCAGATGGAGAGGAGAGAATAGCATGTTCAGTTGGAACAGGTCCAGTT GATGCAGCTTACAAGGCTGTTGACCAAATAATCCAGTTTCGTATCGTCATTATAAAGCCA CTAAGACCCAGTGTTTACAAGGATTTGCATCGAATTTATCACCACCAGTTGAATTTCATG AGGAAGGATACTCTGATTCCAACCGTCCTCCGAGAATACGGCATGACTTCAGTCACAGAA GGCATTGACGCTATTGCGACGACTCGAGTGGTTGTCACCGGAGACGTGGCCAACAACTCC AAACACGCCTTGACTGGCCACTCTTTCAACCGCTCCTTCAGCGGGAGCGGGGCGGCAATG GACATCGTCGTGTCCAGCGTCAGAGCTTACCTGAGTGCCCTGAACAAGATGTGCAGCTTC GCTGGCGCTGCGAGAGCCAGCAGCACTGAGGTGCCTGGGAGCGCAAGTGTTCAACGCGCA GAATGAGCTCGGCGGCGTTCGCGTTCGTGTTAGTTCTCGTATGGGATGCCAGGATGGACT GTGCGTTGTAAGAGCTTGTCAAGCTGTTGAGGTGACATTTCGTTTCAGTAACAGGCTGCT CGATATTATGGGGTACCCCTTGTCAGTGGGGTGACGACAATGCTGTTCTTTTTCTGGGAG GATAGTCCCTTCAGCTTAGAACATGCAGGAAATTTTGGCCCTATGTAGTGTACATTTTGT ATCTTTAAACATACTTTCAATAATGAAATAATATTAGGGTCCATCTAGCCACATGGGTGG CCATCGGCATGAAAATGATCGAAAATAAATATT