Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d052471_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:4:190740161:190743671:1 gene:Zm00001d052471 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein STRICTOSIDINE SYNTHASE-LIKE 2
Sequence	ATGAAGATGGCCGTGCTCGCGGGCGCGGCCGTCGTTGCGGTGGCGGCGGCGGCGATGGTC GCCGCGCTCCTGTCCTCCCCGGACGCGCTGCGCGACGTCGCGGTGCTGGAGATTGGCGGC GGGGAAGGCCGTGTCGAGTTGGTCCCCGTGGACGCCGGCGCCGCGGGGCCCGAGAGCCTG GCGTTCGACCCGGCCGGCGGCGGCCCGTACGCGGGCGTGTCGGACGGCCGCGTCCTCCGG TGGGTCCCCGGCGAGCGGCGCTGGGAAGAGCACTCGGCCTCCTGCGCGCCCGAACTGCTG CTGGAGATCGGCGACGCTGAGCTGCTGCCGCTGGACGGCGCCGCGGGGCCAGAGAGCCTC GTGTTCGCCGGTGGGTACGGTGACGGCGGTGAGGGCGGCCCCCGTTCACGGGCGTGTCGG ACGGCCGGGTGCTTGGGTGCCGGCGGAGCGGCGCTGGGCCGAGCACTCCTGCTCCGCGCG CAGACCTCTAGCTTCTCGCGAGAGACTCTGCTCGTCCCCAACCAACCAGAGAGCTCTGCG TACGGTTCAAGGCTGACGGTTGTGTGCCGCCCGCCGCCGTCCAAGCTGGACAGCTGCAGG GGCTCCCAGGACCCGGGGCGCGAGCACGAGTGCGGGCGCCCGTTGGGCCTCAAGTTCAAC CCCGACACGGGGGAGCTCTACGTGGCCGACGCCTACCACGGCCTGCGCATGGTCGCGCCG GGCCCGGGCGGCGGCAAGGCGTCGAGGCCGGTGGCGCCGGAGTGGTGGCAGGGCGCGCGC GCCTTCAGCTTCGCCAACGGCGTCGAGGTCGACCCGGGCACCGGCGCCGTCTACTTCACC GAGACGAGCACGAGGTTCCAGAGGCGGGAGTTCCTGCGCATCGTCGTGTCCGGCGACACG ACGGGGCGGCTGCTGCGGTACGACCCGAGGGGCGGCGGTGGGGTGGAGGTGCTGGCCGAC GGCCTGGCGTTCCCCAACGGCCTCGCGATGAGCAGCGACGGCACGCACCTGCTGCTGGCG GAGACCACCACGGGGAGGATCCTCCGGTACTGGCTCCGCCCGACGGCTCCCAAGGCGCCG GCGCTGCTGGAGGAGGTGGCGCGGCTGCCGTGGTTCCCGGACAACATCAGGATGAGCCCC CGGGGCGGCTTCTGGGTGGGGCTCCACGCCAGGAGGGGCAAGCTCGCCCAGTACTGCATC TCCTACCCCTGGCTCCGGCGCCTGGTGCTGGCGCTGCCGCCGCGCCACGTCCAGCGCGCC TCGTCGCTGCTCAGCCGCCTCGGGCGGCAGGTCATCGCGCTGCGGCTGAGCGAGGAGGAC GGGAGGGTGGTGGAGATGGCCAGCGTCCACGGGGATCTTCGGAGGGTGTTCAGGTCCGTC AGCGAAGTGGCGGAGAGGAACGGCAGCATCTGGATTGGCTCTGTCATGTCGCCGTTTCTC GGAGTCTACAAGTTGCAGTAG

Peptide Sequence

PEP ID	Zm00001d052471_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:4:190740161:190743671:1 gene:Zm00001d052471 transcript:Zm00001d052471_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein STRICTOSIDINE SYNTHASE-LIKE 2
Sequence	MKMAVLAGAAVVAVAAAAMVAALLSSPDALRDVAVLEIGGGEGRVELVPVDAGAAGPESL AFDPAGGGPYAGVSDGRVLRWVPGERRWEEHSASCAPELLLEIGDAELLPLDGAAGPESL VFAGGYGDGGEGGPRSRACRTAGCLGAGGAALGRALLLRAQTSSFSRETLLVPNQPESSA YGSRLTVVCRPPPSKLDSCRGSQDPGREHECGRPLGLKFNPDTGELYVADAYHGLRMVAP GPGGGKASRPVAPEWWQGARAFSFANGVEVDPGTGAVYFTETSTRFQRREFLRIVVSGDT TGRLLRYDPRGGGGVEVLADGLAFPNGLAMSSDGTHLLLAETTTGRILRYWLRPTAPKAP ALLEEVARLPWFPDNIRMSPRGGFWVGLHARRGKLAQYCISYPWLRRLVLALPPRHVQRA SSLLSRLGRQVIALRLSEEDGRVVEMASVHGDLRRVFRSVSEVAERNGSIWIGSVMSPFL GVYKLQ

Transcript Sequence

Transcript ID	Zm00001d052471_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:190740161:190743671:1 gene:Zm00001d052471 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein STRICTOSIDINE SYNTHASE-LIKE 2
Sequence	CGCGCTCACGCCCCGGGGCCGCTTCCGTTTCGGCTCCCCCTCCCCTCCCCTCCCGTAAAC CTCTGAACCCTCATCGAGTTTCTGTGGACGCCACGCCACGCGACCATACGTGTATAGCAC GCAGCGCGGCATCGGCGTCGCACGCACTCGCGCTTGCCGCTGGACGGAGGAGCGGAGCAC CGATCGGCCGGGCTCGGTGCACGCGCCTAGCGGATGAAGATGGCCGTGCTCGCGGGCGCG GCCGTCGTTGCGGTGGCGGCGGCGGCGATGGTCGCCGCGCTCCTGTCCTCCCCGGACGCG CTGCGCGACGTCGCGGTGCTGGAGATTGGCGGCGGGGAAGGCCGTGTCGAGTTGGTCCCC GTGGACGCCGGCGCCGCGGGGCCCGAGAGCCTGGCGTTCGACCCGGCCGGCGGCGGCCCG TACGCGGGCGTGTCGGACGGCCGCGTCCTCCGGTGGGTCCCCGGCGAGCGGCGCTGGGAA GAGCACTCGGCCTCCTGCGCGCCCGAACTGCTGCTGGAGATCGGCGACGCTGAGCTGCTG CCGCTGGACGGCGCCGCGGGGCCAGAGAGCCTCGTGTTCGCCGGTGGGTACGGTGACGGC GGTGAGGGCGGCCCCCGTTCACGGGCGTGTCGGACGGCCGGGTGCTTGGGTGCCGGCGGA GCGGCGCTGGGCCGAGCACTCCTGCTCCGCGCGCAGACCTCTAGCTTCTCGCGAGAGACT CTGCTCGTCCCCAACCAACCAGAGAGCTCTGCGTACGGTTCAAGGCTGACGGTTGTGTGC CGCCCGCCGCCGTCCAAGCTGGACAGCTGCAGGGGCTCCCAGGACCCGGGGCGCGAGCAC GAGTGCGGGCGCCCGTTGGGCCTCAAGTTCAACCCCGACACGGGGGAGCTCTACGTGGCC GACGCCTACCACGGCCTGCGCATGGTCGCGCCGGGCCCGGGCGGCGGCAAGGCGTCGAGG CCGGTGGCGCCGGAGTGGTGGCAGGGCGCGCGCGCCTTCAGCTTCGCCAACGGCGTCGAG GTCGACCCGGGCACCGGCGCCGTCTACTTCACCGAGACGAGCACGAGGTTCCAGAGGCGG GAGTTCCTGCGCATCGTCGTGTCCGGCGACACGACGGGGCGGCTGCTGCGGTACGACCCG AGGGGCGGCGGTGGGGTGGAGGTGCTGGCCGACGGCCTGGCGTTCCCCAACGGCCTCGCG ATGAGCAGCGACGGCACGCACCTGCTGCTGGCGGAGACCACCACGGGGAGGATCCTCCGG TACTGGCTCCGCCCGACGGCTCCCAAGGCGCCGGCGCTGCTGGAGGAGGTGGCGCGGCTG CCGTGGTTCCCGGACAACATCAGGATGAGCCCCCGGGGCGGCTTCTGGGTGGGGCTCCAC GCCAGGAGGGGCAAGCTCGCCCAGTACTGCATCTCCTACCCCTGGCTCCGGCGCCTGGTG CTGGCGCTGCCGCCGCGCCACGTCCAGCGCGCCTCGTCGCTGCTCAGCCGCCTCGGGCGG CAGGTCATCGCGCTGCGGCTGAGCGAGGAGGACGGGAGGGTGGTGGAGATGGCCAGCGTC CACGGGGATCTTCGGAGGGTGTTCAGGTCCGTCAGCGAAGTGGCGGAGAGGAACGGCAGC ATCTGGATTGGCTCTGTCATGTCGCCGTTTCTCGGAGTCTACAAGTTGCAGTAGAGGCAT TTACGCTTAAATATGGATTCAGTAGCTTATTATAGCAAAGGAAAACATACATCGCATCTA TATTTGTGTATAAAATTCCTTGTGTCGTCGATGGACATGTTCATCTGGCCAGAGGTTGTG AAAAGCGTCTATGCATCTATGAACTGAATGCATGAGATGGTCCTGGGCCCC