Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d052444_T005
CDS Infomation	cds chromosome:B73_RefGen_v4:4:190133976:190136387:1 gene:Zm00001d052444 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hydroxymethylglutaryl-CoA lyase mitochondrial
Sequence	ATGTCGAGCCTCGAGGAGCCGCTGGGTCTCGGAGACCTGCCTAAGTTGAGTATTAACAGA CTCGGGCGGTTCGTGTCGCTGGGCGCTCGGAGGCCACCGGCCGACGACGACGACCACAGC ACTGGCAAATACAGCAGCAGCTCCTGCAACAATGGCAGCCATCAGATGGCCTTCCATCAT GGCAGCAACTCCTCCTATCCCTGGCACCCGCAGTGCCGCCAGGCCGCCGATCCATCACGC GATGCAGTGGAGCTTAGAGATCTCCCTCGCAAGGTCATGTGGGAGCTGCCGAGGTTCGTG AAGATAGTGGAGGTGGGGCCTCGGGACGGCCTGCAGAACGAGAAGGGCAACGTCCCGGCG TCCGTGAAGATCCAGCTGATACACAAGCTGGTCGGCGCGGGCCTGTCGGTTGTCGAGGCC ACCAGCTTCGTCTCCCCAAAGTGGGTGCCGCAGCTAGCCGACGCAGAGGAGGTGCTGAAG GGTATAAAGCAGGAGCCAGGCGTGCGGTACCCGGTGCTAACACCTAACCTCAGAGGGTTC GAGGCTGCCATCGCAGCCGGCGCGAAGGAAATCGCGGTCTTCGCGTCCGCGTCTGAATCC TTCTCCAGGTCCAACATCAACTGCACCATCGAGGAGAGCCTTGCTCGGTACCGCGGCGTC ACAGCGGCTGCCAAGAAACACGGGCTAAGCATCCGGGGGTACGTGTCATGTGTGATTGCT TGCCCCGTTGGAGGCGCAACCGATCCGGCGAAGGTGGCGTACGTAGCTAAGGAGCTGTAT ACCATGGGCTGCTCGGAGATCTCGCTCGGCGACACGACTGGTGTCGGGACACCAGGTAGC GTGGTTGCTATGCTTCAAGCTGTCATGTCGTTTGTCCCGGTGGACAAGATTGCCGTTCAT TTCCACGATACGTACGGGCAGGCCCTTGCCAACATCCTCGTCTCCCTTCAAATGGGGATC AACATAGTGGACTCGTCGGTGTCGGGCCTTGGAGGCTGCCCGTATGCCAAGGGCGCCACT GGCAACGTCGCCACGGAGGATGTCGTGTACATGCTCCATGGCCTGGGGATCGAGACCAAC GTCGACCTCAACAAGCTCATGGAGGCTGGTGACTACATCTCCAAGCATCTGGGCAGGCCG CTGGGTTCCAAGACCGCCACTGCTCTCCGCAAGCTGACCGCCTGA

Peptide Sequence

PEP ID	Zm00001d052444_P005
PEP Infomation	pep chromosome:B73_RefGen_v4:4:190133976:190136387:1 gene:Zm00001d052444 transcript:Zm00001d052444_T005 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hydroxymethylglutaryl-CoA lyase mitochondrial
Sequence	MSSLEEPLGLGDLPKLSINRLGRFVSLGARRPPADDDDHSTGKYSSSSCNNGSHQMAFHH GSNSSYPWHPQCRQAADPSRDAVELRDLPRKVMWELPRFVKIVEVGPRDGLQNEKGNVPA SVKIQLIHKLVGAGLSVVEATSFVSPKWVPQLADAEEVLKGIKQEPGVRYPVLTPNLRGF EAAIAAGAKEIAVFASASESFSRSNINCTIEESLARYRGVTAAAKKHGLSIRGYVSCVIA CPVGGATDPAKVAYVAKELYTMGCSEISLGDTTGVGTPGSVVAMLQAVMSFVPVDKIAVH FHDTYGQALANILVSLQMGINIVDSSVSGLGGCPYAKGATGNVATEDVVYMLHGLGIETN VDLNKLMEAGDYISKHLGRPLGSKTATALRKLTA

Transcript Sequence

Transcript ID	Zm00001d052444_T005
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:190133976:190136387:1 gene:Zm00001d052444 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hydroxymethylglutaryl-CoA lyase mitochondrial
Sequence	GATCGACCGGCCGCCGATCGTCCAGGAAGGATGTCGAGCCTCGAGGAGCCGCTGGGTCTC GGAGACCTGCCTAAGTTGAGTATTAACAGACTCGGGCGGTTCGTGTCGCTGGGCGCTCGG AGGCCACCGGCCGACGACGACGACCACAGCACTGGCAAATACAGCAGCAGCTCCTGCAAC AATGGCAGCCATCAGATGGCCTTCCATCATGGCAGCAACTCCTCCTATCCCTGGCACCCG CAGTGCCGCCAGGCCGCCGATCCATCACGCGATGCAGTGGAGCTTAGAGATCTCCCTCGC AAGGTCATGTGGGAGCTGCCGAGGTTCGTGAAGATAGTGGAGGTGGGGCCTCGGGACGGC CTGCAGAACGAGAAGGGCAACGTCCCGGCGTCCGTGAAGATCCAGCTGATACACAAGCTG GTCGGCGCGGGCCTGTCGGTTGTCGAGGCCACCAGCTTCGTCTCCCCAAAGTGGGTGCCG CAGCTAGCCGACGCAGAGGAGGTGCTGAAGGGTATAAAGCAGGAGCCAGGCGTGCGGTAC CCGGTGCTAACACCTAACCTCAGAGGGTTCGAGGCTGCCATCGCAGCCGGCGCGAAGGAA ATCGCGGTCTTCGCGTCCGCGTCTGAATCCTTCTCCAGGTCCAACATCAACTGCACCATC GAGGAGAGCCTTGCTCGGTACCGCGGCGTCACAGCGGCTGCCAAGAAACACGGGCTAAGC ATCCGGGGGTACGTGTCATGTGTGATTGCTTGCCCCGTTGGAGGCGCAACCGATCCGGCG AAGGTGGCGTACGTAGCTAAGGAGCTGTATACCATGGGCTGCTCGGAGATCTCGCTCGGC GACACGACTGGTGTCGGGACACCAGGTAGCGTGGTTGCTATGCTTCAAGCTGTCATGTCG TTTGTCCCGGTGGACAAGATTGCCGTTCATTTCCACGATACGTACGGGCAGGCCCTTGCC AACATCCTCGTCTCCCTTCAAATGGGGATCAACATAGTGGACTCGTCGGTGTCGGGCCTT GGAGGCTGCCCGTATGCCAAGGGCGCCACTGGCAACGTCGCCACGGAGGATGTCGTGTAC ATGCTCCATGGCCTGGGGATCGAGACCAACGTCGACCTCAACAAGCTCATGGAGGCTGGT GACTACATCTCCAAGCATCTGGGCAGGCCGCTGGGTTCCAAGACCGCCACTGCTCTCCGC AAGCTGACCGCCTGAAAAAACCTTTTCAAGCACTCCCAAGAGAAATGTATCGGTTCGAGG TCCCATCTCTCAGTCATATGAATGTCCTGTAGTTTTACTTTATGCTTTTTTTCCGCTCAG ACATTGCCTACTCTGAGCATTTTATTCACACACTTTGTACCCGCCGTTGGATGATTCTGA ATAATCTTGGTGTTC