Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d052439_T004
CDS Infomation

cds chromosome:B73_RefGen_v4:4:190073183:190083211:-1 gene:Zm00001d052439 gene_biotype:protein_coding transcript_biotype:protein_coding description:RNA binding (RRM/RBD/RNP motifs) family protein
Sequence

ATGATATTTTATTTTGAGCAGGACCCAGAGACTAAAAAGCCACGAGTGAAGATTTATACT
GATAGAGAAACCGGCAGGAAGAAGGGTGATGCCTTGGTGACATATTTCAAGGAGCCTTCT
GTAGCTTTAGCGGTTCAATTGTTGGATGGGACACCATTCCGTCCTGGTGGTGATGTTTTC
GTTTCAAAGAAAACTGACAAGCAAAAGAAGAGGAAGATAAAGAAGGTTGAGGACAAAATG
CTTGGATGGGGTGGGCATGACGATAAGAAGCTGATGATTCCTGCTACAGTAATTTTAAGG
CACATGTTCACTCCTGCTGAGCTGAGAGCTGATGAAGAGCTTCTTCCTGAGCTTGAGGCT
GATGTTAGAGAGGAATGCATCAAGTTTGGTCCGGTGGATAATGTCAAGGTTTGTGAAAAT
CATCCACAAGGTGTCATATTGGTGAGATTCAAAGACAGGAAAGATGGTGCCAAATGCATA
GAGAAGATGAACGGCAGATGGTTTGCTGGACGGCAAATCCATGCGAGCGAAGACGATGGC
TCTGTTAACCATGCTCTTATCCGTGATTACGACGCGGAGGTGTCAAGGCTGGATCGATTT
GGACAAGAGCTAGAAGAGTCCACATAG

Peptide Sequence

PEP ID

Zm00001d052439_P004
PEP Infomation

pep chromosome:B73_RefGen_v4:4:190073183:190083211:-1 gene:Zm00001d052439 transcript:Zm00001d052439_T004 gene_biotype:protein_coding transcript_biotype:protein_coding description:RNA binding (RRM/RBD/RNP motifs) family protein
Sequence

MIFYFEQDPETKKPRVKIYTDRETGRKKGDALVTYFKEPSVALAVQLLDGTPFRPGGDVF
VSKKTDKQKKRKIKKVEDKMLGWGGHDDKKLMIPATVILRHMFTPAELRADEELLPELEA
DVREECIKFGPVDNVKVCENHPQGVILVRFKDRKDGAKCIEKMNGRWFAGRQIHASEDDG
SVNHALIRDYDAEVSRLDRFGQELEEST

Transcript Sequence

Transcript ID

Zm00001d052439_T004
Transcript Infomation

cdna chromosome:B73_RefGen_v4:4:190073183:190083211:-1 gene:Zm00001d052439 gene_biotype:protein_coding transcript_biotype:protein_coding description:RNA binding (RRM/RBD/RNP motifs) family protein
Sequence

GAGCCTTCGCCGCCAAGAGCCCGATACCCGCCGTCCTCCCTGCTCCTGCTGCCGCGTGCC
CCTCTCCGGCCACCCGCCGCCGGCGCAGTGTCCATGAACTAGCACCTCTTTCTTCGCCCG
GTACCCATTCAGTTCGTCCGCCTCCTTCTCTTCGAGTTTGGGTGCCCATGGAGACCAGCA
GTGCGCCCGCCGCCGCCACCGAGGCCGGCTGGTACGTGCTTGGACCGAACCAGGAGGGCG
TCGGACCCTACGCGCTTGCTGAGCTTCGAGGTGGCTGTTTCCTTCACTCTCCTAGCAATT
CAACGCGTTTCAAGTTCTGAGTTTTCTCTCCGAGGTCGGCCTTAGGGTTCGGTCTGTTCT
GAAAATCAAGCATCCTGCCGATTTTATTCTGGTTTTCTCTGAAGTTTAATTGCCGGCTAG
GTTATCTCGCCGAGAAGAACATTTCGCAAACGGTTATTTCAATGAGAGCACAATGCTCTG
GGCAGAAGGGAGGAAGGAATGGATGCCACTCTCGTCCATCTCTGAGCTACACTCCGCAGT
CGCAGCGAAGGATCAATCTGAACAAGATGTTGATGATGATTTTGAGAAATTTCAGAAGGA
GGTTATCGAAGCCGAGACAGAGGTGAAGGCCTTGAAAGGCAATGATGTGGACCAGCAAGA
TGATGAGCGGCCAGCAACCCCCCCTGATGGAGAGGAAGAATTTACTGATGATGATGGCAC
CATTTACAAATGGGACCGTACTTTGAGGGCATGGGTTCCTCAAAATGATGCATCTGGTAG
CAAGGAAGATTACGCTGTTGAAGAGATGACTTTTGCAGTTGAGGAGGAAATATTTCAGGC
ACCCGATATCCTGGGTCCTGCATTAGAAGAAATCAACAATCTACCTGAAAGCAAAAATAA
AGGATCAGATAAAGCAGAAATGAGAGGAGACAAAAAGCGGAAATCTTATGAGAATCCAGC
TGAGAAAAAGGTATAGTTTCCAAGTCATTCTTGGAGTTATTTGTAAGTTTGCGCATTTTA
ATTCTAGTCTTCAATAAACTAGTAACCTATTGAACTTCTGTGGTAGGAAGCTAACAAACC
TCCGGACAGTTGGTTTGATCTCAAAGTAAACACACATGTCTATGTAACTGGTTTGCCTGA
TGATGTCACAGTGGAGGAGATTGTGGAGGTATTTTCCAAGTGCGGAATAATAAAGGAGCA
TGCGTTATAATACTAGATATTGGTGCAGCTTTCCATTGGTCATCATAGATGGATATGATA
TTTGTTGTTGTGGATGCCTTAAATAAACTGAAAAGATAACAATATTTATATGATATTTTA
TTTTGAGCAGGACCCAGAGACTAAAAAGCCACGAGTGAAGATTTATACTGATAGAGAAAC
CGGCAGGAAGAAGGGTGATGCCTTGGTGACATATTTCAAGGAGCCTTCTGTAGCTTTAGC
GGTTCAATTGTTGGATGGGACACCATTCCGTCCTGGTGGTGATGTTTTCGTTTCAAAGAA
AACTGACAAGCAAAAGAAGAGGAAGATAAAGAAGGTTGAGGACAAAATGCTTGGATGGGG
TGGGCATGACGATAAGAAGCTGATGATTCCTGCTACAGTAATTTTAAGGCACATGTTCAC
TCCTGCTGAGCTGAGAGCTGATGAAGAGCTTCTTCCTGAGCTTGAGGCTGATGTTAGAGA
GGAATGCATCAAGTTTGGTCCGGTGGATAATGTCAAGGTTTGTGAAAATCATCCACAAGG
TGTCATATTGGTGAGATTCAAAGACAGGAAAGATGGTGCCAAATGCATAGAGAAGATGAA
CGGCAGATGGTTTGCTGGACGGCAAATCCATGCGAGCGAAGACGATGGCTCTGTTAACCA
TGCTCTTATCCGTGATTACGACGCGGAGGTGTCAAGGCTGGATCGATTTGGACAAGAGCT
AGAAGAGTCCACATAGAGTGTATATATACACACACACACCAGGGATTAGAGTAGGTGTGT
TACCTCATTCATAGGTAGGTTCGCCTGATTGAACATGAGAAAGAAGTTATTGGATACACC
TGCTAATAAGAGTAGTGACCGGCTTGCAGAGCTGGTGATATCATCACTAGCGAAGTAGCA
GCACACTGCTTTCTCAAATGTGTTGTTTAATGAATGAGAAGCTCATATCGATACTATTAA
CCTCGGCTCCCTATGAAAGTACAGTGGGCATT