Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d052425_T019
CDS Infomation	cds chromosome:B73_RefGen_v4:4:189734816:189740604:-1 gene:Zm00001d052425 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative alpha-L-arabinofuranosidase family protein
Sequence	ATGCCCTGCACCCGCAGACGGGGAGCTCGCGTCTTCCTTCGGATGGTGGATGCATGCATG CATGGTAGACACGCCGGCCCAACCAGAATTGACAAGTGGAAGCGTATGGGTATTACCAGC AACGACGCGGCCCCTCGTGCCGTCCTCCTCCGCTTCTTGTTTCTGCTCTGCATAGGCTGC AAATGCCTGGCATCAGAGGTAGAGGCCACCCAGACGGCGACCCTCGCGGTGGACGCCTCG CCGCAGCTTGCTCGGAAGATCCCTGATACACTGTTCGGGATCTTCTTTGAGGAGATCAAC CATGCAGGGGCTGGTGGCATATGGGCTGAACTTGTTAGTAACAGAGGGTTTGAAGCTGGA GGCCTCCATACTCCATCAAACATTGACCCATGGTCCATCATTGGAGACGACTCCTCTGTA TTTGTGGAGACCGATCGCACATCATGTTTCAGTCGAAACATCGTTGCTCTCAGGATGGAG GTCCTTTGCGATAACTGTCCTACTGGTGGTGTTGGTGTTTACAACCCAGGGTTCTGGGGC ATGAACATAGAAGAAGGAAAGGTCTACAATCTTGTTATGTTTGTTAAGTCACCAGAAACA ACTGACTTGACAGTTTCACTAACAAGCTCTAACGGGTTGCAAAATCTGGCTTCAGCTACA GTAACAGTTTCCGGCGAATCAAACTGGATAAAAGTGGAGCAAAAGTTGGTTGCTAAAGGA ACCAATAGAACCTCAAGGCTTCAAATAACAACTAACAAGAAAGGAGTTGTCTGGTTTGAT CAAGTATCACTCATGCCTGAAGACACATACAAGGGACATGGCTTTCGCACAGAACTTATA TCCATGATTTTGGATTTAAAACCACGATTCTTGAGATTTCCTGGAGGCTGCTTTGTAGAA GGTGGCTGGTTAAGAAATGCCTTTAGGTGGAGAGAATCTATTGGTCCATGGGAAGAGAGA CCTGGACACTTCGGGGATGTTTGGCATTACTGGACTGATGATGGCCTTGGATACTATGAA TTTCTTCAGCTTGCGGAGGACCTGGGTACTGAACCAATCTGGGTATTCAACAATGGAGTC AGCCACAATGATGAAGTTGATACTGTTGCTATTGCTCCTTTTGTAAAGGATGTATTGGAC AGTATAGAATTTGCAAGGGGGAGTGCAAATTCAACATGGGGCTCTGTTAGGGCTGCAATG GGCCACCCTGAACCATTCCCAGTGAAATATGTTGCAATAGGAAATGAAGATTGTGGGAAA AAATTTTACCGCGGTAACTACCTCAAGTTCTACAATGCTATAAGACAGGCCTATCCAGAC ATTCAAATGATTTCAAACTGCGATGGTTCATCTACACCACTTGATCATCCTGCTGATTTA TACGACTTCCATGTCTATAATGATTCTAAGACTTTGTTCAACATGAAGAGCACATTTGAC AGAACATCTCGTAGTGGACCCAAGGCTTTTGTAAGTGAGTACGCTGTTTGGAGAGGTGAT GCAGGTAGAGGAAGTCTTCTTGCTTCATTGGCAGAAGCTGCTTTCCTTACTGGACTGGAG AAGAATAGTGACATTGTTTCCATGGCAAGTTACGCGCCACTATTCGTAAACGACAATGAC CAGACGTGGAACCCAGACGCAATCGTCTTCAACTCCTGGCAGCATTACGGCACTCCCAGT TACTGGATGCAGACGCTTTTCCGCGAGTCTAGTGGTGCTATGTTCCATCCAACGACAATC AGCTCCAGCTACTCAGGTTCACTTGCAGCGTCTGCGATTACCTGGCAGGACTCCGAGAAC AGCTTCCTAAGAGTAAAGGTCATAAACTTCGGGTCAGATGCTGTGACCCTGACAATCTCC ACAAGTGGGCTCCAGGCCAGTATCAACGCTCTGGGATCAACCGCCACTGTTCTCACATCA GCAGATGTGATGGATGAAAACTCCTTC

Peptide Sequence

PEP ID	Zm00001d052425_P019
PEP Infomation	pep chromosome:B73_RefGen_v4:4:189734816:189740604:-1 gene:Zm00001d052425 transcript:Zm00001d052425_T019 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative alpha-L-arabinofuranosidase family protein
Sequence	MPCTRRRGARVFLRMVDACMHGRHAGPTRIDKWKRMGITSNDAAPRAVLLRFLFLLCIGC KCLASEVEATQTATLAVDASPQLARKIPDTLFGIFFEEINHAGAGGIWAELVSNRGFEAG GLHTPSNIDPWSIIGDDSSVFVETDRTSCFSRNIVALRMEVLCDNCPTGGVGVYNPGFWG MNIEEGKVYNLVMFVKSPETTDLTVSLTSSNGLQNLASATVTVSGESNWIKVEQKLVAKG TNRTSRLQITTNKKGVVWFDQVSLMPEDTYKGHGFRTELISMILDLKPRFLRFPGGCFVE GGWLRNAFRWRESIGPWEERPGHFGDVWHYWTDDGLGYYEFLQLAEDLGTEPIWVFNNGV SHNDEVDTVAIAPFVKDVLDSIEFARGSANSTWGSVRAAMGHPEPFPVKYVAIGNEDCGK KFYRGNYLKFYNAIRQAYPDIQMISNCDGSSTPLDHPADLYDFHVYNDSKTLFNMKSTFD RTSRSGPKAFVSEYAVWRGDAGRGSLLASLAEAAFLTGLEKNSDIVSMASYAPLFVNDND QTWNPDAIVFNSWQHYGTPSYWMQTLFRESSGAMFHPTTISSSYSGSLAASAITWQDSEN SFLRVKVINFGSDAVTLTISTSGLQASINALGSTATVLTSADVMDENSF

Transcript Sequence

Transcript ID	Zm00001d052425_T019
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:189734816:189740604:-1 gene:Zm00001d052425 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative alpha-L-arabinofuranosidase family protein
Sequence	GGGTCACGTGCAGTGCGGGGGACGGGCCCCACGTTCCCGTGCGCCGTGGCCCTGCGCGGG CGGTAGGCAGGACAGCCACCGCCGAACGAAGTGGCGCGCTCCGGCAAGCAACTGCGGCCG TGCCGTGCCGCGCCGCGACATGGGCGCTGGCCGTCCCGTCCCGTGCCGGTTCGTCATCCT GCCTTCGGAAGCCACTGCTAACCGCTTTCTCTGCCCTTCTCTACCTACATAAGCGCGAGG GAGCACGCCTCCCGGCCTCTCCTCATCCAATTCCTATGCCCTGCACCCGCAGACGGGGAG CTCGCGTCTTCCTTCGGATGGTGGATGCATGCATGCATGGTAGACACGCCGGCCCAACCA GAATTGACAAGTGGAAGCGTATGGGTATTACCAGCAACGACGCGGCCCCTCGTGCCGTCC TCCTCCGCTTCTTGTTTCTGCTCTGCATAGGCTGCAAATGCCTGGCATCAGAGGTAGAGG CCACCCAGACGGCGACCCTCGCGGTGGACGCCTCGCCGCAGCTTGCTCGGAAGATCCCTG ATACACTGTTCGGGATCTTCTTTGAGGAGATCAACCATGCAGGGGCTGGTGGCATATGGG CTGAACTTGTTAGTAACAGAGGGTTTGAAGCTGGAGGCCTCCATACTCCATCAAACATTG ACCCATGGTCCATCATTGGAGACGACTCCTCTGTATTTGTGGAGACCGATCGCACATCAT GTTTCAGTCGAAACATCGTTGCTCTCAGGATGGAGGTCCTTTGCGATAACTGTCCTACTG GTGGTGTTGGTGTTTACAACCCAGGGTTCTGGGGCATGAACATAGAAGAAGGAAAGGTCT ACAATCTTGTTATGTTTGTTAAGTCACCAGAAACAACTGACTTGACAGTTTCACTAACAA GCTCTAACGGGTTGCAAAATCTGGCTTCAGCTACAGTAACAGTTTCCGGCGAATCAAACT GGATAAAAGTGGAGCAAAAGTTGGTTGCTAAAGGAACCAATAGAACCTCAAGGCTTCAAA TAACAACTAACAAGAAAGGAGTTGTCTGGTTTGATCAAGTATCACTCATGCCTGAAGACA CATACAAGGGACATGGCTTTCGCACAGAACTTATATCCATGATTTTGGATTTAAAACCAC GATTCTTGAGATTTCCTGGAGGCTGCTTTGTAGAAGGTGGCTGGTTAAGAAATGCCTTTA GGTGGAGAGAATCTATTGGTCCATGGGAAGAGAGACCTGGACACTTCGGGGATGTTTGGC ATTACTGGACTGATGATGGCCTTGGATACTATGAATTTCTTCAGCTTGCGGAGGACCTGG GTACTGAACCAATCTGGGTATTCAACAATGGAGTCAGCCACAATGATGAAGTTGATACTG TTGCTATTGCTCCTTTTGTAAAGGATGTATTGGACAGTATAGAATTTGCAAGGGGGAGTG CAAATTCAACATGGGGCTCTGTTAGGGCTGCAATGGGCCACCCTGAACCATTCCCAGTGA AATATGTTGCAATAGGAAATGAAGATTGTGGGAAAAAATTTTACCGCGGTAACTACCTCA AGTTCTACAATGCTATAAGACAGGCCTATCCAGACATTCAAATGATTTCAAACTGCGATG GTTCATCTACACCACTTGATCATCCTGCTGATTTATACGACTTCCATGTCTATAATGATT CTAAGACTTTGTTCAACATGAAGAGCACATTTGACAGAACATCTCGTAGTGGACCCAAGG CTTTTGTAAGTGAGTACGCTGTTTGGAGAGGTGATGCAGGTAGAGGAAGTCTTCTTGCTT CATTGGCAGAAGCTGCTTTCCTTACTGGACTGGAGAAGAATAGTGACATTGTTTCCATGG CAAGTTACGCGCCACTATTCGTAAACGACAATGACCAGACGTGGAACCCAGACGCAATCG TCTTCAACTCCTGGCAGCATTACGGCACTCCCAGTTACTGGATGCAGACGCTTTTCCGCG AGTCTAGTGGTGCTATGTTCCATCCAACGACAATCAGCTCCAGCTACTCAGGTTCACTTG CAGCGTCTGCGATTACCTGGCAGGACTCCGAGAACAGCTTCCTAAGAGTAAAGGTCATAA ACTTCGGGTCAGATGCTGTGACCCTGACAATCTCCACAAGTGGGCTCCAGGCCAGTATCA ACGCTCTGGGATCAACCGCCACTGTTCTCACATCAGCAGATGTGATGGATGAAAACTCCT TCA