Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d052399_T018
CDS Infomation

cds chromosome:B73_RefGen_v4:4:189150888:189154637:1 gene:Zm00001d052399 gene_biotype:protein_coding transcript_biotype:protein_coding description:Long chain acyl-CoA synthetase 8
Sequence

ATGATCACACATGGCAACATGGTGGCCACAACTGCAGCAGTCATGACAATAGTCCCAAAC
CTTGGCATGAATGATGTTTATCTGGCTTATCTTCCATTGGCTCATGTCTTTGAACTAGCA
GGGGAGACTGTCATGTTAGCTTCTGGCAGTGCCATTGGATATGGTTCAGCATTAACTATG
ACTGATACATCGAACAAGATTAAGAAGGGAACAAAAGGAGATGTTTCTGTACTGAATCCT
ACTCTTATGATTTCAGTTCCTGCAATTTTGGATCGTATCAGAGATGCAGTATTTAAGAAA
GTTGGTGAGAAGGGTGGCCTGACAAAAAAGCTGTTTGATTTTTCATATAAGCGAAATATT
GCAGCAATTGAAGGGAGTTGGTTTGGATCTTGGGCACCAGAGAGGATGTTATGGGATCAC
ATTATTTATAAACCAATACGGGCAATGCTTGGAGGACGTCTAAGATTTGTTCTTTGTGGT
GGTGCACCTCTGTCAAGTGACACACAAAGATTTATGAATATATGTCTAGGTGTCCCAGTG
GGTCAAGGCTATGGATTGACTGAAACTTGTGCTGGAGCAGCTTTCACTGAATGGGATGAT
ACAAGTGTGGGTCGTGTTGGTCCACCACTTCCTTGTTGCTATGTGAAGCTTGTCTCATGG
GAAGAAGGTGGTTACAAGATTTCTGATTCTCCAATGCCGAGAGGAGAGGTCGCGGTTGGT
GGACACAGTATAACAAAAGGTTATTTCAACAATGAAGCAAAGACGAACGAAGTATACAAG
GTTGATGAGAGGGGCATACGCTGGTTCTACACTGGTGATATTGGTCAGTTCCATCCTGAT
GGGTGCCTTGAGATTATTGACAGGAAAAAAGATATAGTAAAGCTTCAGCATGGAGAATAT
GTGTCTCTTGGCAAGGTTGAATCGGCTCTAGCAACAAGCAACTATGTGGAGAACATCATG
GTTTATGCCGATCCATTTCATAACTACTGTGTTGCCCTGGTTGTTCCAGCGCACCAGGCC
TTGGAGAAGTGGGCTCAGAATTCCGGGATGAACTATGAAGGCTTTGGAGAGCTTTGCCAA
AACGACCGAGCAATTAAGGAGGTTCAGCAATCGCTATCAAAGGCCGCAAAAGCAGCGAGG
CTCGAGAAATTCGAGGTGCCAGCGAAGATCGTGCTGTTGCCTGAACCGTGGACGCCGGAG
TCCGGGCTGGTGACCGCAGCGCTTAAACTGAAGAGGGAGCAAATAAAGGCCAAATTCAAA
GGCGATCTGGACAAGCTCTACCACTGA

Peptide Sequence

PEP ID

Zm00001d052399_P018
PEP Infomation

pep chromosome:B73_RefGen_v4:4:189150888:189154637:1 gene:Zm00001d052399 transcript:Zm00001d052399_T018 gene_biotype:protein_coding transcript_biotype:protein_coding description:Long chain acyl-CoA synthetase 8
Sequence

MITHGNMVATTAAVMTIVPNLGMNDVYLAYLPLAHVFELAGETVMLASGSAIGYGSALTM
TDTSNKIKKGTKGDVSVLNPTLMISVPAILDRIRDAVFKKVGEKGGLTKKLFDFSYKRNI
AAIEGSWFGSWAPERMLWDHIIYKPIRAMLGGRLRFVLCGGAPLSSDTQRFMNICLGVPV
GQGYGLTETCAGAAFTEWDDTSVGRVGPPLPCCYVKLVSWEEGGYKISDSPMPRGEVAVG
GHSITKGYFNNEAKTNEVYKVDERGIRWFYTGDIGQFHPDGCLEIIDRKKDIVKLQHGEY
VSLGKVESALATSNYVENIMVYADPFHNYCVALVVPAHQALEKWAQNSGMNYEGFGELCQ
NDRAIKEVQQSLSKAAKAARLEKFEVPAKIVLLPEPWTPESGLVTAALKLKREQIKAKFK
GDLDKLYH

Transcript Sequence

Transcript ID

Zm00001d052399_T018
Transcript Infomation

cdna chromosome:B73_RefGen_v4:4:189150888:189154637:1 gene:Zm00001d052399 gene_biotype:protein_coding transcript_biotype:protein_coding description:Long chain acyl-CoA synthetase 8
Sequence

GGGTGTAATGATCACACATGGCAACATGGTGGCCACAACTGCAGCAGTCATGACAATAGT
CCCAAACCTTGGCATGAATGATGTTTATCTGGCTTATCTTCCATTGGCTCATGTCTTTGA
ACTAGCAGGGGAGACTGTCATGTTAGCTTCTGGCAGTGCCATTGGATATGGTTCAGCATT
AACTATGACTGATACATCGAACAAGATTAAGAAGGGAACAAAAGGAGATGTTTCTGTACT
GAATCCTACTCTTATGATTTCAGTTCCTGCAATTTTGGATCGTATCAGAGATGCAGTATT
TAAGAAAGTTGGTGAGAAGGGTGGCCTGACAAAAAAGCTGTTTGATTTTTCATATAAGCG
AAATATTGCAGCAATTGAAGGGAGTTGGTTTGGATCTTGGGCACCAGAGAGGATGTTATG
GGATCACATTATTTATAAACCAATACGGGCAATGCTTGGAGGACGTCTAAGATTTGTTCT
TTGTGGTGGTGCACCTCTGTCAAGTGACACACAAAGATTTATGAATATATGTCTAGGTGT
CCCAGTGGGTCAAGGCTATGGATTGACTGAAACTTGTGCTGGAGCAGCTTTCACTGAATG
GGATGATACAAGTGTGGGTCGTGTTGGTCCACCACTTCCTTGTTGCTATGTGAAGCTTGT
CTCATGGGAAGAAGGTGGTTACAAGATTTCTGATTCTCCAATGCCGAGAGGAGAGGTCGC
GGTTGGTGGACACAGTATAACAAAAGGTTATTTCAACAATGAAGCAAAGACGAACGAAGT
ATACAAGGTTGATGAGAGGGGCATACGCTGGTTCTACACTGGTGATATTGGTCAGTTCCA
TCCTGATGGGTGCCTTGAGATTATTGACAGGAAAAAAGATATAGTAAAGCTTCAGCATGG
AGAATATGTGTCTCTTGGCAAGGTTGAATCGGCTCTAGCAACAAGCAACTATGTGGAGAA
CATCATGGTTTATGCCGATCCATTTCATAACTACTGTGTTGCCCTGGTTGTTCCAGCGCA
CCAGGCCTTGGAGAAGTGGGCTCAGAATTCCGGGATGAACTATGAAGGCTTTGGAGAGCT
TTGCCAAAACGACCGAGCAATTAAGGAGGTTCAGCAATCGCTATCAAAGGCCGCAAAAGC
AGCGAGGCTCGAGAAATTCGAGGTGCCAGCGAAGATCGTGCTGTTGCCTGAACCGTGGAC
GCCGGAGTCCGGGCTGGTGACCGCAGCGCTTAAACTGAAGAGGGAGCAAATAAAGGCCAA
ATTCAAAGGCGATCTGGACAAGCTCTACCACTGAAGAAGCGACAGAGGACGGTTTAATTT
GCACCTACTGCTTCCAGACGCTTGCGGTGCCAAAAGCTGCCTGGATGGAACTTTTACTGA
CCTGCACGAGTGGTGTGTGTGTGTGTATCCCAGCTGCTGATACACAGGAGCTTCGTTCTT
CTGTGACTGTGACTGAGGGAAAATAAACCCAGTGTTGGAATGATCTTGATTTGTAATAGC
TTCACGTCATGGGATTTTAATTTTGTCATAGCACAGAGGATGCTCAATTTCACGTCCGTT
ACGGGTCAGTTATGACACTAAGCATAT