Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d052396_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:4:189093521:189098209:1 gene:Zm00001d052396 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ZF-HD-transcription factor 18 description:Pentatricopeptide repeat-containing protein
Sequence	ATGAACGTGCACATGCAGCAGCAGCACCACCTCCGTCAGCTCCGAGCCGTCCTCCTCCGC CGCGGCCACCCCGTCCCCCCACCGCCGGCGACCCACCCGGACCCTGACCGGGCCTTCCTC GCCGCCATCCGTGCCGCCGCCTCCTCTGCCCCACGCCTCGTGCTCGCCGCCTGCGCCTGC CTCCGCCGCGCCGGCCTGCCCGCACCGGGGCCCCGAGCGCTTCCGGCCCTGCTCCGCTCC GCTGCGCGCTGCGAGGGTGCTGGCGCGTACGTCGCGGCCACGCACGCGCTGGCCGTCAGG ACAGGGGCACTGGACGATGGGTTTGTCGGAACCGCGCTGGCCGGGGCGTACGCGGCGTGC GGGTGCGTGAGGGACACGCGGAAAGTGTTTGACGGAATGGCCGTGAGGGACGTCGTCTCC TGGGGCGTCATGCTTGATAGTTATTGTCAGACTCGGAACTATAAAGAAGCTTTGCTTCTG TTTGCTAAGATGAAGAATTCTGGAGTTGTTCCAGACCAATTGATCCTTGCTACTGTTCTA CCAGCTTGTGGTCATATAAGGCATTTGAGAATCGGGAAAGCCATTCACTCGTACATGTTG GTGTCGGACATGATTATCGGCGCTCACATTAGTAGTGCTCTCATCAGTTTGTATGCTAGT TGTGCGAACATGGAGATGGCAGAAAAGCTATATAACGAAATGCCAAGGAAGGACTTGGTC TCATCAACTGCCATGGTTTCTGGGTACGCCAGGAATAGAAAAGTCGAGATTGCTCGCTCT ATATTTGATGGGATGCCAGAGAAGGATGTTGTATCTTGGAGTGCCATGATATCAGGATAT GTTGATAGTAACCAGCCTAACGAAGCACTGAGTCTGTTCAATGGTATGCAAGAGTGTGGT ATCAGGTCTGATGAAATTACCATGTTAAGTGTCATATCTGCATGTGCTAATTTAGGTTCC CTCGATAAAGCCAAGTGGATCCATGCCTTCATTAAGAACAGTGGGTTGAATAAGGTACTG CACATTTGCAATGCTCTTATTGATATGTTCGCCAAATGTGGGGGTATTAACCTTGCATTG AATGTCTTCAATGAAATGCCTCTAAAGAATGTTATCACCTGGACAAGTATGATTAGTGCC TTTGCTATGCACGGTGATGGGAAATCTTCCTTACGTCTGTTTGAGCAGATGAAAGATGAA GGCGCTGAACCCAATGAAGTGACATTTCTTAGTTTACTTTATGCTTGCTGTCATGCTGGT CTAGTTCATGAAGGCCGTTTATTGTTTAGCTCGATGGTTCAGCAATACGGGATTGAACCC AAGCATGAGCACTATGGTTGTATGGTGGATCTTCTAGGAAGGGCTAAACTTATGCAAGAA GCAGTTAGTCTCATAGAGTCAATGCATTTAGAGCCCAATGTGCCTATCTGGGGATCTCTT TTAGCAGCATGCTGGATGCATGGTGATCTCAAGCTCGGCGCTTTTGCTGCCAAGAAAATT TTGCAGTTGGATCCTAATCATGATGGAGCATCTGTGCTTTTATTGAAGATATACATGAAA TCTGATAACTTGAACAATGCTCAGGAGGTGAGGGGAGTAATGAAACTCCACAGGGTCTCA AAAGAAACAGGCTTGAGTTGGATGGAACTGAATGAGCCTTTTCATGAGTTTGCAGCTGGA GGTGAAAAACATCCAGAAAGTGGCAAGATCTTCCTTCAAAAAGTTGTGAATTAA

Peptide Sequence

PEP ID	Zm00001d052396_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:4:189093521:189098209:1 gene:Zm00001d052396 transcript:Zm00001d052396_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ZF-HD-transcription factor 18 description:Pentatricopeptide repeat-containing protein
Sequence	MNVHMQQQHHLRQLRAVLLRRGHPVPPPPATHPDPDRAFLAAIRAAASSAPRLVLAACAC LRRAGLPAPGPRALPALLRSAARCEGAGAYVAATHALAVRTGALDDGFVGTALAGAYAAC GCVRDTRKVFDGMAVRDVVSWGVMLDSYCQTRNYKEALLLFAKMKNSGVVPDQLILATVL PACGHIRHLRIGKAIHSYMLVSDMIIGAHISSALISLYASCANMEMAEKLYNEMPRKDLV SSTAMVSGYARNRKVEIARSIFDGMPEKDVVSWSAMISGYVDSNQPNEALSLFNGMQECG IRSDEITMLSVISACANLGSLDKAKWIHAFIKNSGLNKVLHICNALIDMFAKCGGINLAL NVFNEMPLKNVITWTSMISAFAMHGDGKSSLRLFEQMKDEGAEPNEVTFLSLLYACCHAG LVHEGRLLFSSMVQQYGIEPKHEHYGCMVDLLGRAKLMQEAVSLIESMHLEPNVPIWGSL LAACWMHGDLKLGAFAAKKILQLDPNHDGASVLLLKIYMKSDNLNNAQEVRGVMKLHRVS KETGLSWMELNEPFHEFAAGGEKHPESGKIFLQKVVN

Transcript Sequence

Transcript ID	Zm00001d052396_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:189093521:189098209:1 gene:Zm00001d052396 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ZF-HD-transcription factor 18 description:Pentatricopeptide repeat-containing protein
Sequence	AGGCGCATACGATTCAGGAAACGTGGGCCGGAGCCAATGAACGTGCACATGCAGCAGCAG CACCACCTCCGTCAGCTCCGAGCCGTCCTCCTCCGCCGCGGCCACCCCGTCCCCCCACCG CCGGCGACCCACCCGGACCCTGACCGGGCCTTCCTCGCCGCCATCCGTGCCGCCGCCTCC TCTGCCCCACGCCTCGTGCTCGCCGCCTGCGCCTGCCTCCGCCGCGCCGGCCTGCCCGCA CCGGGGCCCCGAGCGCTTCCGGCCCTGCTCCGCTCCGCTGCGCGCTGCGAGGGTGCTGGC GCGTACGTCGCGGCCACGCACGCGCTGGCCGTCAGGACAGGGGCACTGGACGATGGGTTT GTCGGAACCGCGCTGGCCGGGGCGTACGCGGCGTGCGGGTGCGTGAGGGACACGCGGAAA GTGTTTGACGGAATGGCCGTGAGGGACGTCGTCTCCTGGGGCGTCATGCTTGATAGTTAT TGTCAGACTCGGAACTATAAAGAAGCTTTGCTTCTGTTTGCTAAGATGAAGAATTCTGGA GTTGTTCCAGACCAATTGATCCTTGCTACTGTTCTACCAGCTTGTGGTCATATAAGGCAT TTGAGAATCGGGAAAGCCATTCACTCGTACATGTTGGTGTCGGACATGATTATCGGCGCT CACATTAGTAGTGCTCTCATCAGTTTGTATGCTAGTTGTGCGAACATGGAGATGGCAGAA AAGCTATATAACGAAATGCCAAGGAAGGACTTGGTCTCATCAACTGCCATGGTTTCTGGG TACGCCAGGAATAGAAAAGTCGAGATTGCTCGCTCTATATTTGATGGGATGCCAGAGAAG GATGTTGTATCTTGGAGTGCCATGATATCAGGATATGTTGATAGTAACCAGCCTAACGAA GCACTGAGTCTGTTCAATGGTATGCAAGAGTGTGGTATCAGGTCTGATGAAATTACCATG TTAAGTGTCATATCTGCATGTGCTAATTTAGGTTCCCTCGATAAAGCCAAGTGGATCCAT GCCTTCATTAAGAACAGTGGGTTGAATAAGGTACTGCACATTTGCAATGCTCTTATTGAT ATGTTCGCCAAATGTGGGGGTATTAACCTTGCATTGAATGTCTTCAATGAAATGCCTCTA AAGAATGTTATCACCTGGACAAGTATGATTAGTGCCTTTGCTATGCACGGTGATGGGAAA TCTTCCTTACGTCTGTTTGAGCAGATGAAAGATGAAGGCGCTGAACCCAATGAAGTGACA TTTCTTAGTTTACTTTATGCTTGCTGTCATGCTGGTCTAGTTCATGAAGGCCGTTTATTG TTTAGCTCGATGGTTCAGCAATACGGGATTGAACCCAAGCATGAGCACTATGGTTGTATG GTGGATCTTCTAGGAAGGGCTAAACTTATGCAAGAAGCAGTTAGTCTCATAGAGTCAATG CATTTAGAGCCCAATGTGCCTATCTGGGGATCTCTTTTAGCAGCATGCTGGATGCATGGT GATCTCAAGCTCGGCGCTTTTGCTGCCAAGAAAATTTTGCAGTTGGATCCTAATCATGAT GGAGCATCTGTGCTTTTATTGAAGATATACATGAAATCTGATAACTTGAACAATGCTCAG GAGGTGAGGGGAGTAATGAAACTCCACAGGGTCTCAAAAGAAACAGGCTTGAGTTGGATG GAACTGAATGAGCCTTTTCATGAGTTTGCAGCTGGAGGTGAAAAACATCCAGAAAGTGGC AAGATCTTCCTTCAAAAAGTTGTGAATTAAAGATGCATGGATGTTGAGGATATGAGAGAA TATGTTTTGCTGCATAGTGGGAAACTTGTTTTTTTTCCTGCCAAGTGATTTAAGGTAGGG GATACCACATATTGCCAAAGAGTAACCAATTTGTTTGAGAATTGCTACTCCTTTCTGGCT TTCTGGATTGCATAGTGTGAATGCAGGTCTTACCAGTTTTTATTCATTATGTAGTATTGT GCTATCCAACATTTTTTTTGCTCTCCACTTCGCAGAGCATCCTTCAATCAGTATATTTTT TTTCTCGAAAACGTGCAGGAGAATTGCGTCTCATTGTATTAAGAAGAAAAGTAACCAGGG TCTAAAGAAGGCCCGATACAAAAGACCCCTTACGGGGGCCAGAAACACGCATACAAGAAG GATTGCTTACTGCAATAGGTTGACTCTCATTTATCCGTTTAGAAATTGTTTTACTAACAC ATGATTGCCCATCTGAGAAACTTGCTGGCTTGGGCAAAGTTCTTTTTGCCCTGCTATATA ACTCTGAGCCACATTTCAGTGACATAATATCAGTGTCTGAACAAATTTGGAGACTTGACC TCGGAATTGCCATTTAGTTTTCTTTAGAAATAGAAACAATAATTTATTAGATTGCTTACT GTGATGAACTTTGAGAAAATAAAACCAATTGCTTTTGATGACATCAAGTTAATTGTGATT TTCATGTGAGATGAAAATTTCAATCAACAAAATCAGTATAATGTACATCTTTGCTCAAAT AGCAAGATAATTTTGATCATACCTGTATGTTTTCAATTGACAATTATACTTCACATGTTA TGTTTATATATGTGTTCTGAACCTGCCATGCTAAGAGTACCTTGAAAGCAATGCTTTATG ATTTTTTTTTTGGAATACTAAGTTTTCCTTGAGAGTTGAGTTGGAGCATGCTCTTTATCT TTTGACACTAGATCTTTAGAAGAGAACCAGTAGAGAAGATCTGGTTATTCATGGTTTACC TTGAACTGTACTTCCATTTATCCTTTTAGTCCATTGTTGGTTCCATTTGTACTCTATTTC TGACCTAGGCTGCTTATATACAAAAAAAAGCACTTGTCTGTACACAAATGCTCATGTGGA GAGACATATGTAGATAGAACAGAATATTGCATTTGTATTGTAAGGTCATCATGAACTGTC TGTCACCTTATTCTCCACGATCATGAACAAATTAGAAAATGAACATCCTGGTGCCTGTCA TCTTATTTGCAAAACATCTCTTGCGCAGTACATCGATTGGTAATATCTCTTGCATGGGCA GAGACTGTGGAAGGCAATGGTTATTTTTCAAATCTGATGAGCGAGTCATTCAGCCCACTG CTTGACCTTGAACTGAATACCAATTCTCAAGATCAACTGTCACAGAATATGGTAGCAGCA CCAACCGAGAGACCAAATCAGAGAAGATCAAAGAATTTCAGCGAGCAGGAAGATGCACTA TCGGTGTCATCTTGACTCAATGTTAGCATGGATTTAGTTAAAGAAGCAACCGAACTAGGA GCACCTATTGGAATTGAACCTATGATCACACTTCCATTCCAACGAGGATTTCCCCTCAAC GAGCAACCAAAATCCTCTGATGCATCGTTGGGGCACAATGTAAGAGAATGCCAACTAGTT AGTTGGATGCAGACACAAATTAACTGTAGGGGCCAAAGTGGTATGACGACTACACAAGAA AGATTGTGGAAGCCTGTGGGGTGCTCTAGCCTGAAGATCACACCAAGTCTTCCCAATTCC TTCGTTGTCGGAATCTCTTCCTCTCGCGTCGTCGCGACAGACTGTTCCTTGAGGATTACA GCAAGTGCTCTGCCCGCATCCCAAGTTCAAGTGCAGCTGCCGCTTTACCCAACGATTTTA GTTAGGGACAATGAGAAACCATGGAAAAGTATAGCAAAATCGACATGGACAACAAGAAGT GAACAAGGATAGGTTTTGAAAGCGAAGTGACAGTGTTCCCCCTGCTGAATCTTTTGTGCA AGAAAGCCTATGGTTATACGTGGTATTCTCATGACAATAAGTTGGTTGTGATAGACTAGT CAGTCCTTTTTGAAGGCAATGGCTGTGGTGTCCTTACACAACCACACAGGGATTGGCTGG CTGAGCCGTTGGGGTGGTCCTTGCATTGGTGCTACTCTGGTTAGTACTCCTACTTAAGAG TGGGATGTTGTCACGTTGCTACTAACTCTGTCATGACTGTGATGTGATAATGTTAAGAAA ATAAGACACGGACAAGCCAAAGCTTTGTCCAAAGGTTGCGTTTCTGAGACATTCTTCTGA ATCGATATTTCAATAGTGCAAGGAATTTGCTTTATTTTCATTGGCCAGTACGAACTGCCG AAATTTACTTATTATTTTTAGCGGCCAGGAGTCCACCGAAAATCATCCGAACTCTGTAGT GGAAGCTGCAAGATGTTCTGTTGTATTCTATTTCATACCCTGCACTGTTGTGGTGGTATT GTTTTTTCTGTTTCTCTTTTGGTGGCAGATTTCTGCAACAGTTCCTTTTCTTTTTAGCGA CCTTGACTTGTTAACTGAAGTTCCATTCGGTCACGTGCCTTTGCAATGTTTCTTATTTAT AGACCACCTTTGATTATCCCTT