Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d052377_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:4:188547876:188549444:-1 gene:Zm00001d052377 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat protein PPR868-14 isoform 1%3B Pentatricopeptide repeat protein PPR868-14 isoform 2%3B Pentatricopeptide repeat protein PPR868-14 isoform 3
Sequence	ATGCAGAGTCCAGAAATCCAACAGAGAAACAGGGCTCCGACCCACTCGCGCGCTGGTTCG CTGGCACCGCGCGTCCCTCGCCACCTCCGCACCGCCGCCGCGCTCGCGGCCGCGGTGCAG GGCCTCATCGACGCGTCCCCTGCGCGGGGCGAGTCGCAGACCATCCACGCGCAGCTCCTA GCGTCGGGACTCGTCGGCAGTGCCGACCTCTCTGTCAAGCTCCTCGTTCTGCACATACGG TGCGGCTCCCTGCACAATGCCCGCGCCGTGTTCGACGGAATGCCGAGCCGGAGCCGCGCC GCGCACAACTACCTCATCGCGGGATACTTCCGGCGGGGCCGCCCCGCAGAGGCGCTGGGG ATCTTGCGGCGGCTCGCGGCGTCCACGGGGCGGCTGGACGTCTTCGCGCTGTCCATGGCG CTGAAGCTGTCTGCGGCGCTGGCTCTGCCCGGCGTCGTCGCCAGGGAGGCCCACGCGCGC GCGCTGAGGTCCGTCGAACAGTCCGACGATATCCTGTTCGCGGCCCTGGTGGATGCCTAC GTGAAGAGCGGGTTGCTTGGCTACGCGCGGCGGGTGCACGGCGCAATGCCCGTGCGGAGC GTCGTGTGCTCCACGGCACTGCTCGTCGGGTGCATGCAGGAAGGGCTGTTCGAGGACGCT GAGGCGATATTCAACGAGATGGAGGGGAAGGACGTCGTGGCGTACAACGCCATGGTGGAG GGGTACAGCAAGACGGAAGAGACGGCGGAGGGCTCGCTCGAGGTGTTGAAGGCGATGCAG CGAGCGGGGCTTCGTCCCACGGTATCGACATTCGTGAGCGTGCTCGGGGCCTGCTCACTC TTGTCGTCGCCAGAGCTCGGCGAGCAGGTGCATTGCCAGGGGACGAAAAGCGGCCTAGTC TTGGACATCAAAGTTGGAAGCGCTCTGGTCGACATGTATGCCAAGTGTGGACGGGTGGAA GACGGCCGTAGGATCTTCAACCAGATGGCAGAGAGAAACGTGATTACCTGGACTTCGATG ATCGACGGGTATGGGAAGAACGGCCTCTCTGACGAGGCCCTCCAGCTGTTTGGCGAAATG CGGGAGCGGCGAGACGTGAGGCCGAACCATGCCACCTTCTTGAGCATTCTGTCGGCGTGC GCACACGCTGGGCTGCTGTCCCAGGGCCAGGAGGCTTTCCAGAGCATGGAGAGTGAGTAC TTGCTGCAGCCACGGATGGAACACTACGCATGCATGGTGGACTTGCTGGGTAGATTCGGA GGCGTGCGGCAGGCCTATGATTTCGTCCGAGGTATGCCGGTGAGGCCAAACTCTGATGTG TGGGCTGCGCTGCTCGGGGCGGCTACACTGCACGGGGATATGGACATCTGCAAAGTTGCA TCGAGGGAGGTCTTCGAGCTGAGCCGCAAGGGGAGACCGGGCGCCTACATGGCATTCTCC AACACACTTGCGGCAGCTGGGGAGTGGGACGGCGTGCACGACGTTAGGGAGATGATGAAA CAGCGAGGCGTGCTGAAAGACACTGCTTGCAGTTGGGTCGGTTCTGAGAACCCGCCACTC GTCGACTGA

Peptide Sequence

PEP ID	Zm00001d052377_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:4:188547876:188549444:-1 gene:Zm00001d052377 transcript:Zm00001d052377_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat protein PPR868-14 isoform 1%3B Pentatricopeptide repeat protein PPR868-14 isoform 2%3B Pentatricopeptide repeat protein PPR868-14 isoform 3
Sequence	MQSPEIQQRNRAPTHSRAGSLAPRVPRHLRTAAALAAAVQGLIDASPARGESQTIHAQLL ASGLVGSADLSVKLLVLHIRCGSLHNARAVFDGMPSRSRAAHNYLIAGYFRRGRPAEALG ILRRLAASTGRLDVFALSMALKLSAALALPGVVAREAHARALRSVEQSDDILFAALVDAY VKSGLLGYARRVHGAMPVRSVVCSTALLVGCMQEGLFEDAEAIFNEMEGKDVVAYNAMVE GYSKTEETAEGSLEVLKAMQRAGLRPTVSTFVSVLGACSLLSSPELGEQVHCQGTKSGLV LDIKVGSALVDMYAKCGRVEDGRRIFNQMAERNVITWTSMIDGYGKNGLSDEALQLFGEM RERRDVRPNHATFLSILSACAHAGLLSQGQEAFQSMESEYLLQPRMEHYACMVDLLGRFG GVRQAYDFVRGMPVRPNSDVWAALLGAATLHGDMDICKVASREVFELSRKGRPGAYMAFS NTLAAAGEWDGVHDVREMMKQRGVLKDTACSWVGSENPPLVD

Transcript Sequence

Transcript ID	Zm00001d052377_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:188547876:188549444:-1 gene:Zm00001d052377 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat protein PPR868-14 isoform 1%3B Pentatricopeptide repeat protein PPR868-14 isoform 2%3B Pentatricopeptide repeat protein PPR868-14 isoform 3
Sequence	ATGCAGAGTCCAGAAATCCAACAGAGAAACAGGGCTCCGACCCACTCGCGCGCTGGTTCG CTGGCACCGCGCGTCCCTCGCCACCTCCGCACCGCCGCCGCGCTCGCGGCCGCGGTGCAG GGCCTCATCGACGCGTCCCCTGCGCGGGGCGAGTCGCAGACCATCCACGCGCAGCTCCTA GCGTCGGGACTCGTCGGCAGTGCCGACCTCTCTGTCAAGCTCCTCGTTCTGCACATACGG TGCGGCTCCCTGCACAATGCCCGCGCCGTGTTCGACGGAATGCCGAGCCGGAGCCGCGCC GCGCACAACTACCTCATCGCGGGATACTTCCGGCGGGGCCGCCCCGCAGAGGCGCTGGGG ATCTTGCGGCGGCTCGCGGCGTCCACGGGGCGGCTGGACGTCTTCGCGCTGTCCATGGCG CTGAAGCTGTCTGCGGCGCTGGCTCTGCCCGGCGTCGTCGCCAGGGAGGCCCACGCGCGC GCGCTGAGGTCCGTCGAACAGTCCGACGATATCCTGTTCGCGGCCCTGGTGGATGCCTAC GTGAAGAGCGGGTTGCTTGGCTACGCGCGGCGGGTGCACGGCGCAATGCCCGTGCGGAGC GTCGTGTGCTCCACGGCACTGCTCGTCGGGTGCATGCAGGAAGGGCTGTTCGAGGACGCT GAGGCGATATTCAACGAGATGGAGGGGAAGGACGTCGTGGCGTACAACGCCATGGTGGAG GGGTACAGCAAGACGGAAGAGACGGCGGAGGGCTCGCTCGAGGTGTTGAAGGCGATGCAG CGAGCGGGGCTTCGTCCCACGGTATCGACATTCGTGAGCGTGCTCGGGGCCTGCTCACTC TTGTCGTCGCCAGAGCTCGGCGAGCAGGTGCATTGCCAGGGGACGAAAAGCGGCCTAGTC TTGGACATCAAAGTTGGAAGCGCTCTGGTCGACATGTATGCCAAGTGTGGACGGGTGGAA GACGGCCGTAGGATCTTCAACCAGATGGCAGAGAGAAACGTGATTACCTGGACTTCGATG ATCGACGGGTATGGGAAGAACGGCCTCTCTGACGAGGCCCTCCAGCTGTTTGGCGAAATG CGGGAGCGGCGAGACGTGAGGCCGAACCATGCCACCTTCTTGAGCATTCTGTCGGCGTGC GCACACGCTGGGCTGCTGTCCCAGGGCCAGGAGGCTTTCCAGAGCATGGAGAGTGAGTAC TTGCTGCAGCCACGGATGGAACACTACGCATGCATGGTGGACTTGCTGGGTAGATTCGGA GGCGTGCGGCAGGCCTATGATTTCGTCCGAGGTATGCCGGTGAGGCCAAACTCTGATGTG TGGGCTGCGCTGCTCGGGGCGGCTACACTGCACGGGGATATGGACATCTGCAAAGTTGCA TCGAGGGAGGTCTTCGAGCTGAGCCGCAAGGGGAGACCGGGCGCCTACATGGCATTCTCC AACACACTTGCGGCAGCTGGGGAGTGGGACGGCGTGCACGACGTTAGGGAGATGATGAAA CAGCGAGGCGTGCTGAAAGACACTGCTTGCAGTTGGGTCGGTTCTGAGAACCCGCCACTC GTCGACTGA