Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d052368_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:4:188382524:188385950:-1 gene:Zm00001d052368 gene_biotype:protein_coding transcript_biotype:protein_coding description:Expressed protein; protein
Sequence	ATGGCGACGGTCACGCAGGGGGTGCTGCTGCGGCTGCTGCAGGCGATGCACACGGAGGAG CGCGTGGCGGGGGAGCACCGTTCGCCGGTGCTGCAGGTCACGGGCGTGGTGCCGGCGCTG ACAGCGTCCACCTCCGACGCGCCGCTGCTCGCCGCGCCGCCGTCCAACGGCGTGCTCCTC AACCTCTCCGACGGCCTCCACTCCACCTACGTGCAGGTCCCGCCCGCCGACGCCGACGCG CTGCTGGCCGCCGCGCGCCCGCACCTCGTGGGCCACCTCGTCCACCTCGACCGCCTCCGC CTCGCGCGCCCCGTGCCGCGCGCGCTCGGCCTCCGCACCGTCCCGTCCTCCCGCTCCCTG CCCTGCGCTGGCGCGCCCCAGCCGCTCGTCGTGCGCCCCGCCGCCTGCGCCCGCGGCTAC GTCATCCAGCCCGCCGCGTCCGCCGCCGACGCCGCGCCGCCGCTCATGCCCTCCTGCCCC ACCTCCTCCTCCGACGACAACGACGCCAAGCGGACCGTCCTCGGGCCCAAGAACGCCGTC GCCGACCCCGCGCCGCCGCCGCAGCAGCCCGTCAAGCGCCGGTTCTCGTCGCCGGCGCCG CCGTCCAAGCAGCGAGACCCGTCGCCCGCCGCCAAGCCCGCGGTCTCGCGGGCGTCGTCT CCCTCCGTCGGCAAAAGCGCGTCGCGGCCGTCCTCGCCCGCGCTCAGGTCCACGCCCAGG GCGACGTCGCCGGCGCCGTCCAAGTGCGTCGTGCCCAGCCTGGTCGCCGCCAGGGAGGAG AACCGGAGGGCGGCCAGGGAGCCGGCGATCATCGTGCCGTCGAGGTACCGCCAGCCGTCG CCGGCGGGCGGGAGGAGGGGCGCCGCATCTCCGGCCGTCGCCGGTGGGAGGCGGGCGTCC CTGTCGCCTAGCTCGCGCCGGCTGTCCGGGGAAGGGACCGGCAAGAAGAAGGTTGGGGTG CTGGTGGCTGGGATCTCCAAGATGACGGATCTGGGGAGCGGGTCGGCTGCCAAGCCCGGG AGGAAGAGCTGGGACGATCCCACGCGCACTGTGGCTGCAACGTCCGTCATGAAGTCTAAG GCCAAGGTGGACAAGGATACCATCCTCAGGACTCAGGAAGCAATGTCGAGGCGGCTAAGT GATGCTACGACGGAACAATCCAGTAACGATGATTCATCTGTTGACGAGAAGCCCAAGCAG CCTCGTAAGAAGATAGACGCCCCTACCTCAGTGAAGGCAAAGACCGCAGCTCCGAAAATT ACACTTCACGACCCTAAATGGACTGACGGCAGCATTCCTTTGGACGCACTTCCTGATAAA CTCTCAAAAATAGGAAAGGAAGCTTTTGAGCGGAGAGATTCAGCAGCAACTGCTGCAGCT AGCGCCCTGCAAGAGGCATTGATCTCTGAATCTGTGATCAGGAACATAAGCAAGTTCTCT GAAATCTGCGCGTCCGCAAGGGTCTCCAATCCGTTCCCAACAGTAGATCTCTTCCTTGTC GTCTGTGAGGATGCTCTCAAGTGGAAGACCATCGCTGCCGAGTCTGTGGTGACCAACGGG GCTGAAGAGGAGGAACTGCTGGAGAAGAAATCGACTTGGCACTGGGTCGGCGCTGCGTTA GCCACTGATCTCGAGGTCCTCAAGCTTCTGAACGGTGCCACTGGGCCCTTCTCCCGGACG CGGAGCAGCGGCACTACCAACAAGCCAAATGCATCTTCGGTGGAACCGCCGAGGACAGCA AGCATGTCGTCGAAGAAGCAAGCGCATGGAGCTTCAGCCAAGGCGCAGTCTAAGGCGGCG GCGGTGTCACCAAGCTCCCCGCCGAGGTGCAGCACGTGGAACATGGGCGAGACAGCTGAG CTCGCCAAGGCCCTGTGGCGCGAGATGCGCGCGTGGTTCCTGACCTTCGTGGACGAGGCA CTGGACGTGGGGTTCCACCTGTTCGAAGATCAACAGAACGTCGCTGGCAAGGGGAGGCAG CACGGCGGCGGACACATAACGATGGTCCTCTCGCAGTTCAAGAAGATCAGCGACTGGCTG GACCAGGTAGGGAAGATCGCGGCGGCGGAGGAGGAGGAGCAGAGGACCAAGGAAAAGATC GAGCTCTTGAAGCGCAAGATCTACGGGTTTGTCATTAGCCACATGGGGTCTGCGTTGGAG AGCCCAGCATCCGTCTCGGTTTCTTCGAGGAGCTGA

Peptide Sequence

PEP ID	Zm00001d052368_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:4:188382524:188385950:-1 gene:Zm00001d052368 transcript:Zm00001d052368_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Expressed protein; protein
Sequence	MATVTQGVLLRLLQAMHTEERVAGEHRSPVLQVTGVVPALTASTSDAPLLAAPPSNGVLL NLSDGLHSTYVQVPPADADALLAAARPHLVGHLVHLDRLRLARPVPRALGLRTVPSSRSL PCAGAPQPLVVRPAACARGYVIQPAASAADAAPPLMPSCPTSSSDDNDAKRTVLGPKNAV ADPAPPPQQPVKRRFSSPAPPSKQRDPSPAAKPAVSRASSPSVGKSASRPSSPALRSTPR ATSPAPSKCVVPSLVAAREENRRAAREPAIIVPSRYRQPSPAGGRRGAASPAVAGGRRAS LSPSSRRLSGEGTGKKKVGVLVAGISKMTDLGSGSAAKPGRKSWDDPTRTVAATSVMKSK AKVDKDTILRTQEAMSRRLSDATTEQSSNDDSSVDEKPKQPRKKIDAPTSVKAKTAAPKI TLHDPKWTDGSIPLDALPDKLSKIGKEAFERRDSAATAAASALQEALISESVIRNISKFS EICASARVSNPFPTVDLFLVVCEDALKWKTIAAESVVTNGAEEEELLEKKSTWHWVGAAL ATDLEVLKLLNGATGPFSRTRSSGTTNKPNASSVEPPRTASMSSKKQAHGASAKAQSKAA AVSPSSPPRCSTWNMGETAELAKALWREMRAWFLTFVDEALDVGFHLFEDQQNVAGKGRQ HGGGHITMVLSQFKKISDWLDQVGKIAAAEEEEQRTKEKIELLKRKIYGFVISHMGSALE SPASVSVSSRS

Transcript Sequence

Transcript ID	Zm00001d052368_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:188382524:188385950:-1 gene:Zm00001d052368 gene_biotype:protein_coding transcript_biotype:protein_coding description:Expressed protein; protein
Sequence	GCACGACAGTCACGCACGCCGCCCCGAATCTCTCCCCTCCACCTCCAAACAAAAATCTCT CCTCTTCCTCCTCCTCCTCTCCCACGATCCCCACTCCCACCCCACCCCCTCGATCCCAAC TCCACCCAGCCGAGGCCAGCCCAGCAAATCATGGCGACGGTCACGCAGGGGGTGCTGCTG CGGCTGCTGCAGGCGATGCACACGGAGGAGCGCGTGGCGGGGGAGCACCGTTCGCCGGTG CTGCAGGTCACGGGCGTGGTGCCGGCGCTGACAGCGTCCACCTCCGACGCGCCGCTGCTC GCCGCGCCGCCGTCCAACGGCGTGCTCCTCAACCTCTCCGACGGCCTCCACTCCACCTAC GTGCAGGTCCCGCCCGCCGACGCCGACGCGCTGCTGGCCGCCGCGCGCCCGCACCTCGTG GGCCACCTCGTCCACCTCGACCGCCTCCGCCTCGCGCGCCCCGTGCCGCGCGCGCTCGGC CTCCGCACCGTCCCGTCCTCCCGCTCCCTGCCCTGCGCTGGCGCGCCCCAGCCGCTCGTC GTGCGCCCCGCCGCCTGCGCCCGCGGCTACGTCATCCAGCCCGCCGCGTCCGCCGCCGAC GCCGCGCCGCCGCTCATGCCCTCCTGCCCCACCTCCTCCTCCGACGACAACGACGCCAAG CGGACCGTCCTCGGGCCCAAGAACGCCGTCGCCGACCCCGCGCCGCCGCCGCAGCAGCCC GTCAAGCGCCGGTTCTCGTCGCCGGCGCCGCCGTCCAAGCAGCGAGACCCGTCGCCCGCC GCCAAGCCCGCGGTCTCGCGGGCGTCGTCTCCCTCCGTCGGCAAAAGCGCGTCGCGGCCG TCCTCGCCCGCGCTCAGGTCCACGCCCAGGGCGACGTCGCCGGCGCCGTCCAAGTGCGTC GTGCCCAGCCTGGTCGCCGCCAGGGAGGAGAACCGGAGGGCGGCCAGGGAGCCGGCGATC ATCGTGCCGTCGAGGTACCGCCAGCCGTCGCCGGCGGGCGGGAGGAGGGGCGCCGCATCT CCGGCCGTCGCCGGTGGGAGGCGGGCGTCCCTGTCGCCTAGCTCGCGCCGGCTGTCCGGG GAAGGGACCGGCAAGAAGAAGGTTGGGGTGCTGGTGGCTGGGATCTCCAAGATGACGGAT CTGGGGAGCGGGTCGGCTGCCAAGCCCGGGAGGAAGAGCTGGGACGATCCCACGCGCACT GTGGCTGCAACGTCCGTCATGAAGTCTAAGGCCAAGGTGGACAAGGATACCATCCTCAGG ACTCAGGAAGCAATGTCGAGGCGGCTAAGTGATGCTACGACGGAACAATCCAGTAACGAT GATTCATCTGTTGACGAGAAGCCCAAGCAGCCTCGTAAGAAGATAGACGCCCCTACCTCA GTGAAGGCAAAGACCGCAGCTCCGAAAATTACACTTCACGACCCTAAATGGACTGACGGC AGCATTCCTTTGGACGCACTTCCTGATAAACTCTCAAAAATAGGAAAGGAAGCTTTTGAG CGGAGAGATTCAGCAGCAACTGCTGCAGCTAGCGCCCTGCAAGAGGCATTGATCTCTGAA TCTGTGATCAGGAACATAAGCAAGTTCTCTGAAATCTGCGCGTCCGCAAGGGTCTCCAAT CCGTTCCCAACAGTAGATCTCTTCCTTGTCGTCTGTGAGGATGCTCTCAAGTGGAAGACC ATCGCTGCCGAGTCTGTGGTGACCAACGGGGCTGAAGAGGAGGAACTGCTGGAGAAGAAA TCGACTTGGCACTGGGTCGGCGCTGCGTTAGCCACTGATCTCGAGGTCCTCAAGCTTCTG AACGGTGCCACTGGGCCCTTCTCCCGGACGCGGAGCAGCGGCACTACCAACAAGCCAAAT GCATCTTCGGTGGAACCGCCGAGGACAGCAAGCATGTCGTCGAAGAAGCAAGCGCATGGA GCTTCAGCCAAGGCGCAGTCTAAGGCGGCGGCGGTGTCACCAAGCTCCCCGCCGAGGTGC AGCACGTGGAACATGGGCGAGACAGCTGAGCTCGCCAAGGCCCTGTGGCGCGAGATGCGC GCGTGGTTCCTGACCTTCGTGGACGAGGCACTGGACGTGGGGTTCCACCTGTTCGAAGAT CAACAGAACGTCGCTGGCAAGGGGAGGCAGCACGGCGGCGGACACATAACGATGGTCCTC TCGCAGTTCAAGAAGATCAGCGACTGGCTGGACCAGGTAGGGAAGATCGCGGCGGCGGAG GAGGAGGAGCAGAGGACCAAGGAAAAGATCGAGCTCTTGAAGCGCAAGATCTACGGGTTT GTCATTAGCCACATGGGGTCTGCGTTGGAGAGCCCAGCATCCGTCTCGGTTTCTTCGAGG AGCTGAGGGCTGTTAGTGGATGCTTCATGCTCTGAAGCTCGCTCTCTCTCTCTGCTCGCA GTTTCTGTTCGTACTGGTTCTTCAACTCGTTTAAGATTGAAAAGGCCACACAGTCATGTA GCCTGTTGTTGGCGCGGTTCTTTTGTGTTTTCTTTTTGGGATGCCTAATTTATGTTGTGA ATAAATTACCGTACTGTCATTTTGGATACGTGTCTGTTTGTCGGGTAGGATTATGAATGA AAAGTTACTTGGTTCAGTTTGCATATGCAACTTAGGTGCTTATTTCATCAGGTCTGCGTG GCGATAACTAACTACACCACGCAGCACCGAAATTTTCAGTAATTTCTGTGGTGGCCAAAA GAAAGAAACGATATTTTGTAATGCTGTACATGTG