Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d052354_T005
CDS Infomation	cds chromosome:B73_RefGen_v4:4:187992043:187996222:-1 gene:Zm00001d052354 gene_biotype:protein_coding transcript_biotype:protein_coding description:Vacuolar-sorting receptor 1
Sequence	ATGGGGTCCCGATCCGCCGGCGCGGCGCTGCGGCTGTGGCTGCTGGCGCTCCTGCTGGGC TGCTGCCAGGGGAGGTTCGTGGTGGAGAAGAACAGCCTCAAGGTGACGGCGCCCGACGGC CTCAAGGGCACCTACGAGTGCGCCATTGGCAACTTCGGGGTGCCCCAGTACGGCGGCACC ATGGTCGGCTTCGTCGCCTACCCCAAGGCCAACAGGAAGGCCTGCAAGAGCTTCGACGAC TTCGACATCTCCTACAAGGCCAAGCCGGGGGCGTTCCCCACCTTCCTGCTCGTCGACAGG GGAGATTGTTACTTCGCAAAGAAGGCATGGAATGCACAGAAAGCAGGAGCAGCGGCAATC CTTGTTGCTGATGACAAAGACGAACCTCTAATTACAATGGACAACCCTGAGGAGGGTGGC AACACGGATTATTTAGAGAACATCACTATTCCTTCGGCGTTAATAACCAAGAGCTTTGGG GACAGGCTCAAGAAAGCAATCGACAGCGGTGACATGGTTAATGTGAATTTGGATTGGAGG GAGGCCCTGCCCCATCCTGACGAGCGTGTCGAGTATGAATTCTGGACCAACAGCAATGAT GAATGTGGCCCAAAGTGCGATAGCCAGATTGACTTCGTCAAGAGCTTCAAAGGAGCAGCA CAGGTACTTGAGAAGAAGGGCTATACGGAGTTCACTCCTCATTACATTACCTGGTACTGC CCAGAGGCCTTCATTCTGAGCAAGCAGTGCAAGTCCCAGTGCATCAATCATGGGAGGTAC TGTGCACCTGACCCAGAACAGGATTTTAGCAAAGGATATGACGGCAAGGATGTGGTGGTC CAGAACTTGCGCCAAGTTTGTGTCTTTAAGGTTGCTAAGGAGCACAAGAAGCCTTGGTTA TGGTGGGACTACGTTACTGATTTTGCGATTCGGTGCCCGATGAAGGAAAAGAAGTACACA AAGGAGTGTGCCGATGGAGTTATCAAGTCACTTGGCCTTGATCATAAAGCAATAGATAAG TGTATTGGTGATCCAGATGCAGATGAGGAAAACCATGTTCTGAAAGCTGAACAGGATGCA CAGATTGGCAAGGGTTCTCGTGGTGATGTTACCATCTTACCAACTCTGGTAATCAACAAT AGACAATACAGAGGGAAGCTTGACAAAGGAGCAGTTCTTAAAGCACTTTGTGCTGGCTTT AGGGAAACCACCGAGCCAGCCGTTTGCTTGAGTGATGATATACAAACAAACGAGTGCCTA GAGAACAATGGTGGCTGTTGGCAAGATAAGGCTGCCAACATCACTGCATGCAAGGATACA TTCCGTGGAAGAGTTTGCGAGTGTCCAGTTGTGAAAGGCGTCAAATTTGTTGGCGATGGC TATACTCACTGTGAAGCTTCCGGATCTGGTCGGTGTGAAATTAACAACGGAGGGTGCTGG AAAGATACCAAGAATGGTCGGACATACTCTGCCTGTACTGATGATGGCTGCAGATGCCCT GACGGATTCAAGGGTGATGGCAAGCACAAATGTGAAGATGTTGATGAATGTAAGGAAAGG ACTGTGTGCCAGTGCGAAGAATGCAGATGCAAAAACACGTGGGGAAGCTACGAGTGCGGC TGCAGCGGGGGCCTGCTTTACATGAAGGAGCATGACACATGCATAAGCAAAAACGGAGCA TCAGAAGCCGGCTGGGGCTTCCTGTGGGTCGTCGTCTTCGGCCTCGTCGCAGCAGGAATT GCAGGGTACGCGGTGTACAAGTACAGGATCCGGAGGTACATGGACTCGGAGATCCGCGCC ATCATGGCCCAGTACATGCCTCTGGACAGCCAAGGAGATGTCCAGAGCCACGCGCACCAT ATTGAGATGTGA

Peptide Sequence

PEP ID	Zm00001d052354_P005
PEP Infomation	pep chromosome:B73_RefGen_v4:4:187992043:187996222:-1 gene:Zm00001d052354 transcript:Zm00001d052354_T005 gene_biotype:protein_coding transcript_biotype:protein_coding description:Vacuolar-sorting receptor 1
Sequence	MGSRSAGAALRLWLLALLLGCCQGRFVVEKNSLKVTAPDGLKGTYECAIGNFGVPQYGGT MVGFVAYPKANRKACKSFDDFDISYKAKPGAFPTFLLVDRGDCYFAKKAWNAQKAGAAAI LVADDKDEPLITMDNPEEGGNTDYLENITIPSALITKSFGDRLKKAIDSGDMVNVNLDWR EALPHPDERVEYEFWTNSNDECGPKCDSQIDFVKSFKGAAQVLEKKGYTEFTPHYITWYC PEAFILSKQCKSQCINHGRYCAPDPEQDFSKGYDGKDVVVQNLRQVCVFKVAKEHKKPWL WWDYVTDFAIRCPMKEKKYTKECADGVIKSLGLDHKAIDKCIGDPDADEENHVLKAEQDA QIGKGSRGDVTILPTLVINNRQYRGKLDKGAVLKALCAGFRETTEPAVCLSDDIQTNECL ENNGGCWQDKAANITACKDTFRGRVCECPVVKGVKFVGDGYTHCEASGSGRCEINNGGCW KDTKNGRTYSACTDDGCRCPDGFKGDGKHKCEDVDECKERTVCQCEECRCKNTWGSYECG CSGGLLYMKEHDTCISKNGASEAGWGFLWVVVFGLVAAGIAGYAVYKYRIRRYMDSEIRA IMAQYMPLDSQGDVQSHAHHIEM

Transcript Sequence

Transcript ID	Zm00001d052354_T005
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:187992043:187996222:-1 gene:Zm00001d052354 gene_biotype:protein_coding transcript_biotype:protein_coding description:Vacuolar-sorting receptor 1
Sequence	TTTTGGTTCATCGCGTCCGTCCTTCCTCCTCCTTCGCCGCCTCTTGCGCCTCCCCTCCCC TCCCCACTCCTCTCCTCTCTCCCCGAACCAAACCAAACCCCTCCCACTCCAACTCCTCGA TTCTCAGAGTGCTGTACAAGTGTCTCGCCCTACCGCGGCCGTCAAAAATCCGATCTTTCC GCCGTTTCCGGAGGCCACACGGCTGCAAGACTGACCAATCCCCCGCGGATCGAGCCGCAG ACGCCAGCAGTTCCTGCTCGCGGACCGCAGGCGGGGCCCGGACGGAGCATGGGGTCCCGA TCCGCCGGCGCGGCGCTGCGGCTGTGGCTGCTGGCGCTCCTGCTGGGCTGCTGCCAGGGG AGGTTCGTGGTGGAGAAGAACAGCCTCAAGGTGACGGCGCCCGACGGCCTCAAGGGCACC TACGAGTGCGCCATTGGCAACTTCGGGGTGCCCCAGTACGGCGGCACCATGGTCGGCTTC GTCGCCTACCCCAAGGCCAACAGGAAGGCCTGCAAGAGCTTCGACGACTTCGACATCTCC TACAAGGCCAAGCCGGGGGCGTTCCCCACCTTCCTGCTCGTCGACAGGGGAGATTGTTAC TTCGCAAAGAAGGCATGGAATGCACAGAAAGCAGGAGCAGCGGCAATCCTTGTTGCTGAT GACAAAGACGAACCTCTAATTACAATGGACAACCCTGAGGAGGGTGGCAACACGGATTAT TTAGAGAACATCACTATTCCTTCGGCGTTAATAACCAAGAGCTTTGGGGACAGGCTCAAG AAAGCAATCGACAGCGGTGACATGGTTAATGTGAATTTGGATTGGAGGGAGGCCCTGCCC CATCCTGACGAGCGTGTCGAGTATGAATTCTGGACCAACAGCAATGATGAATGTGGCCCA AAGTGCGATAGCCAGATTGACTTCGTCAAGAGCTTCAAAGGAGCAGCACAGGTACTTGAG AAGAAGGGCTATACGGAGTTCACTCCTCATTACATTACCTGGTACTGCCCAGAGGCCTTC ATTCTGAGCAAGCAGTGCAAGTCCCAGTGCATCAATCATGGGAGGTACTGTGCACCTGAC CCAGAACAGGATTTTAGCAAAGGATATGACGGCAAGGATGTGGTGGTCCAGAACTTGCGC CAAGTTTGTGTCTTTAAGGTTGCTAAGGAGCACAAGAAGCCTTGGTTATGGTGGGACTAC GTTACTGATTTTGCGATTCGGTGCCCGATGAAGGAAAAGAAGTACACAAAGGAGTGTGCC GATGGAGTTATCAAGTCACTTGGCCTTGATCATAAAGCAATAGATAAGTGTATTGGTGAT CCAGATGCAGATGAGGAAAACCATGTTCTGAAAGCTGAACAGGATGCACAGATTGGCAAG GGTTCTCGTGGTGATGTTACCATCTTACCAACTCTGGTAATCAACAATAGACAATACAGA GGGAAGCTTGACAAAGGAGCAGTTCTTAAAGCACTTTGTGCTGGCTTTAGGGAAACCACC GAGCCAGCCGTTTGCTTGAGTGATGATATACAAACAAACGAGTGCCTAGAGAACAATGGT GGCTGTTGGCAAGATAAGGCTGCCAACATCACTGCATGCAAGGATACATTCCGTGGAAGA GTTTGCGAGTGTCCAGTTGTGAAAGGCGTCAAATTTGTTGGCGATGGCTATACTCACTGT GAAGCTTCCGGATCTGGTCGGTGTGAAATTAACAACGGAGGGTGCTGGAAAGATACCAAG AATGGTCGGACATACTCTGCCTGTACTGATGATGGCTGCAGATGCCCTGACGGATTCAAG GGTGATGGCAAGCACAAATGTGAAGATGTTGATGAATGTAAGGAAAGGACTGTGTGCCAG TGCGAAGAATGCAGATGCAAAAACACGTGGGGAAGCTACGAGTGCGGCTGCAGCGGGGGC CTGCTTTACATGAAGGAGCATGACACATGCATAAGCAAAAACGGAGCATCAGAAGCCGGC TGGGGCTTCCTGTGGGTCGTCGTCTTCGGCCTCGTCGCAGCAGGAATTGCAGGGTACGCG GTGTACAAGTACAGGATCCGGAGGTACATGGACTCGGAGATCCGCGCCATCATGGCCCAG TACATGCCTCTGGACAGCCAAGGAGATGTCCAGAGCCACGCGCACCATATTGAGATGTGA GGATGCATGCAGACTTGATGAGAGGAGACGGAGGCTTGGTCTAGCTTATATAATACACCA GAATTAGATGTGCATATTCGTAACAATCTTGTGTCTAGCACGCAAAGTCCTTGAACATTT GGTGTCTGTGTTAGGTTGTACCATGACATGGTCTTGTTTAGCAATAATTGCCGTCTTTTA TTTCGGTGCCAATAAAGGAGATGGCAAACGGGGCTCTGTGTTGCTCAGTTGTGTATGTGG TCCATGATCAGTGGTAAAAGAATCTGAGTCCCTTATGGGGATTGCAGGGCTAAAATCCTC TTCTTATTTAAAATTGAATAAAGATGAGATTTTAGC