Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d052307_T090
CDS Infomation

cds chromosome:B73_RefGen_v4:4:186591529:186605123:-1 gene:Zm00001d052307 gene_biotype:protein_coding transcript_biotype:protein_coding description:RNA binding (RRM/RBD/RNP motifs) family protein
Sequence

ATGACGACCATGAGCGATGATGGCGACCGCACCTGCCCGCTCTGTGCTGAGGAGATGGAC
ATCACTGACCAGCAACTCAAGCCATGCAAATGCGGCTATGATATTTGTGTTTGGTGCTGG
CACCACATCATAGACATGGCTGAGAAGGAGGAAACAGAGGGCCGCTGCCCTGCCTGCCGC
ACACGCTATGACAAGGATAGGATCGTCAAGATGGCCGCCACTTGTGACAGGACAGTGGCA
GATAAAAATGCGGAGAAGAAGCAAAAGGCCCAAAGGGTTAAGCCAAAGGCAGCACCAACA
GCAACAACAACATCAACCGTAGAATCTAAGAAGCATCTTGCTACTGTCAGGGTTATCCAG
AGAAATCTGGTGTACATAATTGGGCTACCTGCGCATTTATGCAATGAGAGCGTACTTGAG
CGCAGGGAGTACTTTGGTCAATATGGGAAAGTTTTGAAGGTTTCAGTTTCCCGTCCGACT
GGGCCTCCCTCTCAGCAGGCATCAGCAAACAGCAGTATTAGTGTGTATATTACTTATGCC
AAAGAAGAAGAAGCCATCCAGTGTATTCAAGCTGTACACAATTTTGTCTTGGAAGGGAAA
GTGTTAAGGGCATGCTTTGGTACTACGAAGTATTGCCATGCATGGCTGAGAAACATGACA
TGTGGGAATCCAGATTGTCTCTATTTGCATGATGTAGGCAGTCAGGAGGATAGTTTTACT
AAAGATGAGATAATCTCAGCATATACGAGGACCAGAGTCCCCCAGATGGCATCTAGTGTT
TCGCAAAGACGTACAGGCAACATGTTGCCTCCTCCAGGAGATGATTTCTCTTACAGTGCA
GTGGTTTCAGCCAAGCATACCTTCAAGAATGCAACACTTAATACCACCAACCAGCCCAGA
CCTTCACCTCCAAACAGTAGTTCTGGGAGGTCCACACTTCCACCAGCTGCCTCATGGGGA
CAACGTGATGTGAACGCCAGGACAACAGCTACTGGGGTGACATCATCACAATCTCATACA
AAACCAAAATCAGAATCACAGAGTAATCCATTTTCAAGTTCTTCAGTAATTTCCAGTACA
AAAACACCCTCTTCATGGAATGATGATACAAGTACAGCAGCAAAAATGTCTGAAGGACAG
CAAGTGTCAGAAAAAGAGTCCAAAACCTTGCAGCTGTATAAGCCTGGTATTTCAATGGCA
ACACAAGCTACATCATCACTTGAGTTATCACTGAACATAGACTTCTCGACAATACCTTCA
GCTTGGAATGACGATGAGATTGTAGTATCAGATGGGATGTCAAAAGGAAGCGATGAAAAT
CAAGTTGCAAATGAAAATGTCTGCCAATCTAATCATGTTGCTGGGGCGAAAATATTGGAG
GATATTAGATCCAGGGACACTGACATGGAGAAGCTATCTGTTCATATATCTTCAGTAAAA
TTAGGTGGCAATGATGAGATTCAGATTATGGCAGGAAATCAGCGACCAGATGTAATGCCA
TGCACATCTGTTGATGCGCCCATGAATCAGAATTTCGACAGAGACCAATCTCATCTCAAT
CTTAATGAGCCTTTGTTACCTTCAGAAAATAAGGATACTGTTCTTTCTTGTCAATATAGT
TCTGATAAGCGTCTTGATTGGAGTTCAGAGATGCAAAATGGTAGTGTGACTCCTTCAAAT
AATATAGTAGATTCTACGATGCTCACTGGTAAACTTCATAGTATACTACTGGATGTTTCA
GAGCAACCATCATATGCCCGATTCCCTAGTTCATTGGATACTTCATTGTGTAATGATACA
GAAAGTAACACTGCAGCAACGATTGACACTACAATTTCACATATGCAGACTGAGTTCTCT
TCAATTAATAATATGTATGCCTTGTTAAATGGAGGTCAAGATGGACTCGGGACTGTAAAT
ACACACGGTAATGTTTCTGAACAGCATCCTGGAATGGGAAATCATCAATGTAGAGCAATG
GGTTCAGTAAGAACTGAAGCAATGGGTTCAGTAAGAACAGATAGTATAGGAAGTTTTGAG
AAGACCATAAGCATAAATAAGGATGAGAGCAGAATAATTTCTGATATGTTATCATCAGAG
TTTAATCCATGGGATGATTCATATTCGACTGCTAACAATTTTGTTAGGATGCTTAGGGAA
TCTGAAAATAATGATGTCCACTTCGCTGTGCCTTCATGGAAATCAGGAACCGGGAACAAA
GAGTCTAGATTTTCATTTGCTAGACAGGATAACCAAGGGAACTTATTGGATTCATCTCTC
AGAAACTGTGGTACTGGTACCGAGCAGAATTTCAGTTTGCTACCCCAGAATTCTCGAGGA
AATATCTACCAGAATGGCCTTGCATTCCAATCTTTGGAGAACGATTTTTCGAACAGCAAC
TCTCTTGGTGTATTAGATATGTTAACTACTGGTACATCGAGGTCTAAAATATCTGCGCCC
CCAGGATTTTCAGCACCAGCAAGAGTCCCCCCTCCTGGATTTTCTACTGCACTTCCATCC
CAGGAGTTTCCTTCTGGAATTTCGTCTCATGATGGGTCTATAGCCCTTCCTAGATTCCCT
TGGGCATTTTCTTCTCAAATTTCAGCCCAGGAACTGTCTAAGCCCCCTAGTAGACTGCCT
TCTCCATTTTCTTCTGGATTTTCATCACAGAATGGCCCTAACCCTTCATCTGGATTCCCT
TTTTCTTCTGGGTTTTCATCACAGGATGGGTCTAATCAGTCGTATGGCTCAACAAACCCA
GAAAATCTTCTCCGGAATACTGTTCTGGGTGGCAGTAGTAATCATTATCAATCTCAGTTT
GGAAGGCACTCAAGTGACATGGAGTTCGATGATCCTGCTATATTAGCTGTGGGCAAAGGG
CTGATGCCTGGAATTGGCGATTCAGGGCTGGAGATGAAAAATACTCCTGCTTTTCAAGCA
CAGTTGCAACCAGCAAGCAGTGATCCAAGATTTCACTTACATATACAGCCAAATGTGCAG
TCTCACCAAAACATGGGATTCGCAGACCATATGCAGGATGGTTTGAACCATATGAATGAT
AAT

Peptide Sequence

PEP ID

Zm00001d052307_P090
PEP Infomation

pep chromosome:B73_RefGen_v4:4:186591529:186605123:-1 gene:Zm00001d052307 transcript:Zm00001d052307_T090 gene_biotype:protein_coding transcript_biotype:protein_coding description:RNA binding (RRM/RBD/RNP motifs) family protein
Sequence

MTTMSDDGDRTCPLCAEEMDITDQQLKPCKCGYDICVWCWHHIIDMAEKEETEGRCPACR
TRYDKDRIVKMAATCDRTVADKNAEKKQKAQRVKPKAAPTATTTSTVESKKHLATVRVIQ
RNLVYIIGLPAHLCNESVLERREYFGQYGKVLKVSVSRPTGPPSQQASANSSISVYITYA
KEEEAIQCIQAVHNFVLEGKVLRACFGTTKYCHAWLRNMTCGNPDCLYLHDVGSQEDSFT
KDEIISAYTRTRVPQMASSVSQRRTGNMLPPPGDDFSYSAVVSAKHTFKNATLNTTNQPR
PSPPNSSSGRSTLPPAASWGQRDVNARTTATGVTSSQSHTKPKSESQSNPFSSSSVISST
KTPSSWNDDTSTAAKMSEGQQVSEKESKTLQLYKPGISMATQATSSLELSLNIDFSTIPS
AWNDDEIVVSDGMSKGSDENQVANENVCQSNHVAGAKILEDIRSRDTDMEKLSVHISSVK
LGGNDEIQIMAGNQRPDVMPCTSVDAPMNQNFDRDQSHLNLNEPLLPSENKDTVLSCQYS
SDKRLDWSSEMQNGSVTPSNNIVDSTMLTGKLHSILLDVSEQPSYARFPSSLDTSLCNDT
ESNTAATIDTTISHMQTEFSSINNMYALLNGGQDGLGTVNTHGNVSEQHPGMGNHQCRAM
GSVRTEAMGSVRTDSIGSFEKTISINKDESRIISDMLSSEFNPWDDSYSTANNFVRMLRE
SENNDVHFAVPSWKSGTGNKESRFSFARQDNQGNLLDSSLRNCGTGTEQNFSLLPQNSRG
NIYQNGLAFQSLENDFSNSNSLGVLDMLTTGTSRSKISAPPGFSAPARVPPPGFSTALPS
QEFPSGISSHDGSIALPRFPWAFSSQISAQELSKPPSRLPSPFSSGFSSQNGPNPSSGFP
FSSGFSSQDGSNQSYGSTNPENLLRNTVLGGSSNHYQSQFGRHSSDMEFDDPAILAVGKG
LMPGIGDSGLEMKNTPAFQAQLQPASSDPRFHLHIQPNVQSHQNMGFADHMQDGLNHMND
N

Transcript Sequence

Transcript ID

Zm00001d052307_T090
Transcript Infomation

cdna chromosome:B73_RefGen_v4:4:186591529:186605123:-1 gene:Zm00001d052307 gene_biotype:protein_coding transcript_biotype:protein_coding description:RNA binding (RRM/RBD/RNP motifs) family protein
Sequence

CTCTTCCTCTTCTTCCTCTGCAGCACCCCGCAGACCAGACGCAGGCACACCGCACCGTGC
CCCCTCCCTGTTCATCGCCCGCACCCCAACAACAAGGAACAGGCCGGAGTCCAGCCATCC
GACCTTGAATCCGCTTGCCCTCCTGCTTGATCCCACCGCCACGCGCCACCTCAATCGCCC
ACTCCTCCCTCACCCTCTAGGGTTCCCTGCCGCTCCCACAAATCACGCAATCGGAGACCC
CCGGTCCGCCCTCCAATGACGACCATGAGCGATGATGGCGACCGCACCTGCCCGCTCTGT
GCTGAGGAGATGGACATCACTGACCAGCAACTCAAGCCATGCAAATGCGGCTATGATATT
TGTGTTTGGTGCTGGCACCACATCATAGACATGGCTGAGAAGGAGGAAACAGAGGGCCGC
TGCCCTGCCTGCCGCACACGCTATGACAAGGATAGGATCGTCAAGATGGCCGCCACTTGT
GACAGGACAGTGGCAGATAAAAATGCGGAGAAGAAGCAAAAGGCCCAAAGGGTTAAGCCA
AAGGCAGCACCAACAGCAACAACAACATCAACCGTAGAATCTAAGAAGCATCTTGCTACT
GTCAGGGTTATCCAGAGAAATCTGGTGTACATAATTGGGCTACCTGCGCATTTATGCAAT
GAGAGCGTACTTGAGCGCAGGGAGTACTTTGGTCAATATGGGAAAGTTTTGAAGGTTTCA
GTTTCCCGTCCGACTGGGCCTCCCTCTCAGCAGGCATCAGCAAACAGCAGTATTAGTGTG
TATATTACTTATGCCAAAGAAGAAGAAGCCATCCAGTGTATTCAAGCTGTACACAATTTT
GTCTTGGAAGGGAAAGTGTTAAGGGCATGCTTTGGTACTACGAAGTATTGCCATGCATGG
CTGAGAAACATGACATGTGGGAATCCAGATTGTCTCTATTTGCATGATGTAGGCAGTCAG
GAGGATAGTTTTACTAAAGATGAGATAATCTCAGCATATACGAGGACCAGAGTCCCCCAG
ATGGCATCTAGTGTTTCGCAAAGACGTACAGGCAACATGTTGCCTCCTCCAGGAGATGAT
TTCTCTTACAGTGCAGTGGTTTCAGCCAAGCATACCTTCAAGAATGCAACACTTAATACC
ACCAACCAGCCCAGACCTTCACCTCCAAACAGTAGTTCTGGGAGGTCCACACTTCCACCA
GCTGCCTCATGGGGACAACGTGATGTGAACGCCAGGACAACAGCTACTGGGGTGACATCA
TCACAATCTCATACAAAACCAAAATCAGAATCACAGAGTAATCCATTTTCAAGTTCTTCA
GTAATTTCCAGTACAAAAACACCCTCTTCATGGAATGATGATACAAGTACAGCAGCAAAA
ATGTCTGAAGGACAGCAAGTGTCAGAAAAAGAGTCCAAAACCTTGCAGCTGTATAAGCCT
GGTATTTCAATGGCAACACAAGCTACATCATCACTTGAGTTATCACTGAACATAGACTTC
TCGACAATACCTTCAGCTTGGAATGACGATGAGATTGTAGTATCAGATGGGATGTCAAAA
GGAAGCGATGAAAATCAAGTTGCAAATGAAAATGTCTGCCAATCTAATCATGTTGCTGGG
GCGAAAATATTGGAGGATATTAGATCCAGGGACACTGACATGGAGAAGCTATCTGTTCAT
ATATCTTCAGTAAAATTAGGTGGCAATGATGAGATTCAGATTATGGCAGGAAATCAGCGA
CCAGATGTAATGCCATGCACATCTGTTGATGCGCCCATGAATCAGAATTTCGACAGAGAC
CAATCTCATCTCAATCTTAATGAGCCTTTGTTACCTTCAGAAAATAAGGATACTGTTCTT
TCTTGTCAATATAGTTCTGATAAGCGTCTTGATTGGAGTTCAGAGATGCAAAATGGTAGT
GTGACTCCTTCAAATAATATAGTAGATTCTACGATGCTCACTGGTAAACTTCATAGTATA
CTACTGGATGTTTCAGAGCAACCATCATATGCCCGATTCCCTAGTTCATTGGATACTTCA
TTGTGTAATGATACAGAAAGTAACACTGCAGCAACGATTGACACTACAATTTCACATATG
CAGACTGAGTTCTCTTCAATTAATAATATGTATGCCTTGTTAAATGGAGGTCAAGATGGA
CTCGGGACTGTAAATACACACGGTAATGTTTCTGAACAGCATCCTGGAATGGGAAATCAT
CAATGTAGAGCAATGGGTTCAGTAAGAACTGAAGCAATGGGTTCAGTAAGAACAGATAGT
ATAGGAAGTTTTGAGAAGACCATAAGCATAAATAAGGATGAGAGCAGAATAATTTCTGAT
ATGTTATCATCAGAGTTTAATCCATGGGATGATTCATATTCGACTGCTAACAATTTTGTT
AGGATGCTTAGGGAATCTGAAAATAATGATGTCCACTTCGCTGTGCCTTCATGGAAATCA
GGAACCGGGAACAAAGAGTCTAGATTTTCATTTGCTAGACAGGATAACCAAGGGAACTTA
TTGGATTCATCTCTCAGAAACTGTGGTACTGGTACCGAGCAGAATTTCAGTTTGCTACCC
CAGAATTCTCGAGGAAATATCTACCAGAATGGCCTTGCATTCCAATCTTTGGAGAACGAT
TTTTCGAACAGCAACTCTCTTGGTGTATTAGATATGTTAACTACTGGTACATCGAGGTCT
AAAATATCTGCGCCCCCAGGATTTTCAGCACCAGCAAGAGTCCCCCCTCCTGGATTTTCT
ACTGCACTTCCATCCCAGGAGTTTCCTTCTGGAATTTCGTCTCATGATGGGTCTATAGCC
CTTCCTAGATTCCCTTGGGCATTTTCTTCTCAAATTTCAGCCCAGGAACTGTCTAAGCCC
CCTAGTAGACTGCCTTCTCCATTTTCTTCTGGATTTTCATCACAGAATGGCCCTAACCCT
TCATCTGGATTCCCTTTTTCTTCTGGGTTTTCATCACAGGATGGGTCTAATCAGTCGTAT
GGCTCAACAAACCCAGAAAATCTTCTCCGGAATACTGTTCTGGGTGGCAGTAGTAATCAT
TATCAATCTCAGTTTGGAAGGCACTCAAGTGACATGGAGTTCGATGATCCTGCTATATTA
GCTGTGGGCAAAGGGCTGATGCCTGGAATTGGCGATTCAGGGCTGGAGATGAAAAATACT
CCTGCTTTTCAAGCACAGTTGCAACCAGCAAGCAGTGATCCAAGATTTCACTTACATATA
CAGCCAAATGTGCAGTCTCACCAAAACATGGGATTCGCAGACCATATGCAGGATGGTTTG
AACCATATGAATGATAAT