Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d052306_T005
CDS Infomation	cds chromosome:B73_RefGen_v4:4:186584379:186599725:1 gene:Zm00001d052306 gene_biotype:protein_coding transcript_biotype:protein_coding description:Leucine-rich repeat protein kinase family protein
Sequence	ATGGCTGCCGCCTTCTCCGCCGCTATCCTCTTCCACCTGCTGCTGCTCCTCTTCTCGCCG TCCGCTGCGCAGCCTGGTTTCATTAGCTTGGACTGCGGGGGAGCTCGTGATCACACGGAT GCCATTGGGATCCAGTGGACCTCTGATGCCAGCTTCGTCTCTGGCGGCCAGGCCGCGCAG CTGCTGGTCCAGAATGGCCTGCAGCAGACCCAGCAGCAGCTGACCACCGTGCGCTACTTC CCCGCGGACAACAGGAAGCACTGCTACACCATGAACGTCAGGAACAGGACGCGCTACCTT GTCAGGGCCACTTTCCTCTACGGCAACTTCGATAACAGCAACGTCTACCCGAAGTTCGAT ATCTCCCTCGGAGCGTCTCCCTGGTCCACCATCGTCGTCGACGACGCCACCACCCCCGTC GTTGAGGAAGCCATCATCTTGGCTGCTGCTCCCACGCTCAGTGTATGTCTCTCCAATGCC AGCACGGGACAGCCCTTCATCTCTACTCTGGAGCTTCGACAGTTTAACGGTTCGCTCTAC TACACCACTGACGAGACACGCTTCTTTCTTGGACTGTCTGCGAGGATAAATTTTGGCGCA GGAAGCAATGATTCAGTGAGATATCCTGATGATCCATTTGATAGAATCTGGGAATCTGAT TCTGTGAGGAGAGCAAATTACCTTGTTGATGTTGCTCCAGGGACTGAAAGAATATCAACT ACAAAACCCATATTTGTCGGTACCAACGAAGAACCACCTGAAAAGGTCATGCAAACAGCA GTAGTTGGCCAGGATGGGTCATTGAACTACCGCCTTGATTTGGAAGGTTTCCCAGCAAAT GCTTGGGGAGTCTCGTATTTTGCAGAAATTGAAGATTTGGCACCAAATGAAACGAGGAAA TTTAAGTTAGAGGTCCCTGGCATGCCAGCACTCAGTAAACCAACTGTTGATGTGGAGGAG AATGCTCAAGGGAAATACCGTTTGTATGAACCAGGCTACACGAATTTGTCACTTCCGTTT GTTTTCTCCTTTGGGTTCAGGAAGACGAATGATTCTTCAAAGGGGCCTATTTTGAATGCC CTGGAGATTTACAAATATGTCCAAATTACTATGGGATCACAGGATGCAAATATCATGGCC AGCATGGTATCACGATATCCACAGGAAGGTTGGGCACAAGAGGGTGGTGATCCGTGCTTA CCAGCATCATGGTCCTGGGTGCAATGCAGTTCAGAAACTTCTCCAAGGATATTCTCAATC ACATTGTCTGGGAAGAACATTACCGGAAGTATCCCGGTGGAACTGACAAAGCTATCAGGG TTGGTTGAGCTAAGGCTTGATGGTAATTCATTTTCTGGCCAAATTCCTGATTTCAGAGAA TGTGGGAATTTGCAGTATATTCACCTTGAGAACAATCAGTTAACTGGTGAATTGCCATCT TCTTTGGGTGACCTACCTAACCTGAAAGAGTTGTATGTTCAAAATAACAAGCTGTCTGGG CAGGTTCCAAAAGCACTTTTCAAGAGAAGCATTATTTTGAACTTCTCAGGTAACAGTGGC CTTCACATAGTAAGCAATGGCATTAGCCACACCATAATTGTTATATGTCTGGTGATTGGA GCCGTTGTCTTACTGGGTGTTGCTATTGGGTGCTATTTCATTACATGTAGGAGAAAGAAG AAATCTCATGAAGACACTGTTGTCATTGCAGCAGCACCAGCTAAAAAACTTGGTTCATAT TTTAGTGAAGTGGCTACAGAATCAGCACACAGATTTTCTTTATCTGAAATTGAAAATGCT ACTGGCAAATTTGAGAGAAGAATTGGGTCTGGAGGCTTTGGCATAGTATACTATGGAAAG TTGGCTGATGGGAGAGAGATTGCAGTCAAACTTCTCACGAATGACTCGTATCAGGGAATC AGAGAATTCTTGAATGAGGTGACATTGCTTTCCAGAATACATCATAGACACCTGGTTACA TTCCTTGGTTACAGTCAGCAAGATGGCAAAAACATACTAGTGTATGAGTTCATGCATAAT GGGACACTAAAAGAGCACCTTCGTGGAGCTGATAATGAAAAGATAACTAGCTGGCTGAAG CGTCTTGAGATTGCAGAAGATTCTGCGAAAGGTATAGAGTATCTCCACACGGGATGCTCC CCAACAATCATCCATAGAGACCTGAAGAGCAGTAACATTCTCCTAGACAAGAACATGAGA GCAAAAGTGGCAGACTTCGGTCTTTCGAAACCTGCAGTGGATGGGTCTCATGTGTCAAGT ATAGTTCGAGGGACAGTTGGATACCTGGACCCAGAGTACTACATCTCGCAGCAGCTGACG GAGAAGAGCGACATCTACAGCTTCGGCGTGATTTTGCTGGAGCTCATCTCTGGGCATGAA CCCATCTCGAATGACAACTTTGGGCTCAACTGCCGGAACATTGTTGCGTGGGCCCGATCG CACATCGAGAGCGGGAACATCCACGCCATCATTGATGAGTCGTTGGACAGAGGCTGCTAT GACCTGCAGTCGGTGTGGAAGATCGCGGAGGTGGCCATAATGTGTGTGAAGCCCAAGGGC GCCCAGAGGCCTCCCATCTCGGAAGTGCTCAAGGAGATCCAGGACGCCATTGCCATGGAG CGGGTGCTCGTGTCCAATTGCAGCAACAGGATGGGTTCAGGTAGCGTGGAGCAGAATGGA GGAGCATCTTTCGACGAGCTGCTCATGCAGCCGGGTCTCAGATGA

Peptide Sequence

PEP ID	Zm00001d052306_P005
PEP Infomation	pep chromosome:B73_RefGen_v4:4:186584379:186599725:1 gene:Zm00001d052306 transcript:Zm00001d052306_T005 gene_biotype:protein_coding transcript_biotype:protein_coding description:Leucine-rich repeat protein kinase family protein
Sequence	MAAAFSAAILFHLLLLLFSPSAAQPGFISLDCGGARDHTDAIGIQWTSDASFVSGGQAAQ LLVQNGLQQTQQQLTTVRYFPADNRKHCYTMNVRNRTRYLVRATFLYGNFDNSNVYPKFD ISLGASPWSTIVVDDATTPVVEEAIILAAAPTLSVCLSNASTGQPFISTLELRQFNGSLY YTTDETRFFLGLSARINFGAGSNDSVRYPDDPFDRIWESDSVRRANYLVDVAPGTERIST TKPIFVGTNEEPPEKVMQTAVVGQDGSLNYRLDLEGFPANAWGVSYFAEIEDLAPNETRK FKLEVPGMPALSKPTVDVEENAQGKYRLYEPGYTNLSLPFVFSFGFRKTNDSSKGPILNA LEIYKYVQITMGSQDANIMASMVSRYPQEGWAQEGGDPCLPASWSWVQCSSETSPRIFSI TLSGKNITGSIPVELTKLSGLVELRLDGNSFSGQIPDFRECGNLQYIHLENNQLTGELPS SLGDLPNLKELYVQNNKLSGQVPKALFKRSIILNFSGNSGLHIVSNGISHTIIVICLVIG AVVLLGVAIGCYFITCRRKKKSHEDTVVIAAAPAKKLGSYFSEVATESAHRFSLSEIENA TGKFERRIGSGGFGIVYYGKLADGREIAVKLLTNDSYQGIREFLNEVTLLSRIHHRHLVT FLGYSQQDGKNILVYEFMHNGTLKEHLRGADNEKITSWLKRLEIAEDSAKGIEYLHTGCS PTIIHRDLKSSNILLDKNMRAKVADFGLSKPAVDGSHVSSIVRGTVGYLDPEYYISQQLT EKSDIYSFGVILLELISGHEPISNDNFGLNCRNIVAWARSHIESGNIHAIIDESLDRGCY DLQSVWKIAEVAIMCVKPKGAQRPPISEVLKEIQDAIAMERVLVSNCSNRMGSGSVEQNG GASFDELLMQPGLR

Transcript Sequence

Transcript ID	Zm00001d052306_T005
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:186584379:186599725:1 gene:Zm00001d052306 gene_biotype:protein_coding transcript_biotype:protein_coding description:Leucine-rich repeat protein kinase family protein
Sequence	GAAAAAGCTGGATGTCCATCGCCTTGCTTCCAGGTTTTCTCCAACCATGTCCACCAACAC ACTGATCTAGTACTAGGACTAGTACTAGATCGATCCTGCCTGCCTGCCTGCTTGTAACAG CAACAGCAGCAGAAGTGGCGCACTGTGCTTTGCGGTGGCGGAGGCTGCGAGAGAGGAGGA ACTTGCAAGCCGACTTCCATGGCTGCCGCCTTCTCCGCCGCTATCCTCTTCCACCTGCTG CTGCTCCTCTTCTCGCCGTCCGCTGCGCAGCCTGGTTTCATTAGCTTGGACTGCGGGGGA GCTCGTGATCACACGGATGCCATTGGGATCCAGTGGACCTCTGATGCCAGCTTCGTCTCT GGCGGCCAGGCCGCGCAGCTGCTGGTCCAGAATGGCCTGCAGCAGACCCAGCAGCAGCTG ACCACCGTGCGCTACTTCCCCGCGGACAACAGGAAGCACTGCTACACCATGAACGTCAGG AACAGGACGCGCTACCTTGTCAGGGCCACTTTCCTCTACGGCAACTTCGATAACAGCAAC GTCTACCCGAAGTTCGATATCTCCCTCGGAGCGTCTCCCTGGTCCACCATCGTCGTCGAC GACGCCACCACCCCCGTCGTTGAGGAAGCCATCATCTTGGCTGCTGCTCCCACGCTCAGT GTATGTCTCTCCAATGCCAGCACGGGACAGCCCTTCATCTCTACTCTGGAGCTTCGACAG TTTAACGGTTCGCTCTACTACACCACTGACGAGACACGCTTCTTTCTTGGACTGTCTGCG AGGATAAATTTTGGCGCAGGAAGCAATGATTCAGTGAGATATCCTGATGATCCATTTGAT AGAATCTGGGAATCTGATTCTGTGAGGAGAGCAAATTACCTTGTTGATGTTGCTCCAGGG ACTGAAAGAATATCAACTACAAAACCCATATTTGTCGGTACCAACGAAGAACCACCTGAA AAGGTCATGCAAACAGCAGTAGTTGGCCAGGATGGGTCATTGAACTACCGCCTTGATTTG GAAGGTTTCCCAGCAAATGCTTGGGGAGTCTCGTATTTTGCAGAAATTGAAGATTTGGCA CCAAATGAAACGAGGAAATTTAAGTTAGAGGTCCCTGGCATGCCAGCACTCAGTAAACCA ACTGTTGATGTGGAGGAGAATGCTCAAGGGAAATACCGTTTGTATGAACCAGGCTACACG AATTTGTCACTTCCGTTTGTTTTCTCCTTTGGGTTCAGGAAGACGAATGATTCTTCAAAG GGGCCTATTTTGAATGCCCTGGAGATTTACAAATATGTCCAAATTACTATGGGATCACAG GATGCAAATATCATGGCCAGCATGGTATCACGATATCCACAGGAAGGTTGGGCACAAGAG GGTGGTGATCCGTGCTTACCAGCATCATGGTCCTGGGTGCAATGCAGTTCAGAAACTTCT CCAAGGATATTCTCAATCACATTGTCTGGGAAGAACATTACCGGAAGTATCCCGGTGGAA CTGACAAAGCTATCAGGGTTGGTTGAGCTAAGGCTTGATGGTAATTCATTTTCTGGCCAA ATTCCTGATTTCAGAGAATGTGGGAATTTGCAGTATATTCACCTTGAGAACAATCAGTTA ACTGGTGAATTGCCATCTTCTTTGGGTGACCTACCTAACCTGAAAGAGTTGTATGTTCAA AATAACAAGCTGTCTGGGCAGGTTCCAAAAGCACTTTTCAAGAGAAGCATTATTTTGAAC TTCTCAGGTAACAGTGGCCTTCACATAGTAAGCAATGGCATTAGCCACACCATAATTGTT ATATGTCTGGTGATTGGAGCCGTTGTCTTACTGGGTGTTGCTATTGGGTGCTATTTCATT ACATGTAGGAGAAAGAAGAAATCTCATGAAGACACTGTTGTCATTGCAGCAGCACCAGCT AAAAAACTTGGTTCATATTTTAGTGAAGTGGCTACAGAATCAGCACACAGATTTTCTTTA TCTGAAATTGAAAATGCTACTGGCAAATTTGAGAGAAGAATTGGGTCTGGAGGCTTTGGC ATAGTATACTATGGAAAGTTGGCTGATGGGAGAGAGATTGCAGTCAAACTTCTCACGAAT GACTCGTATCAGGGAATCAGAGAATTCTTGAATGAGGTGACATTGCTTTCCAGAATACAT CATAGACACCTGGTTACATTCCTTGGTTACAGTCAGCAAGATGGCAAAAACATACTAGTG TATGAGTTCATGCATAATGGGACACTAAAAGAGCACCTTCGTGGAGCTGATAATGAAAAG ATAACTAGCTGGCTGAAGCGTCTTGAGATTGCAGAAGATTCTGCGAAAGGTATAGAGTAT CTCCACACGGGATGCTCCCCAACAATCATCCATAGAGACCTGAAGAGCAGTAACATTCTC CTAGACAAGAACATGAGAGCAAAAGTGGCAGACTTCGGTCTTTCGAAACCTGCAGTGGAT GGGTCTCATGTGTCAAGTATAGTTCGAGGGACAGTTGGATACCTGGACCCAGAGTACTAC ATCTCGCAGCAGCTGACGGAGAAGAGCGACATCTACAGCTTCGGCGTGATTTTGCTGGAG CTCATCTCTGGGCATGAACCCATCTCGAATGACAACTTTGGGCTCAACTGCCGGAACATT GTTGCGTGGGCCCGATCGCACATCGAGAGCGGGAACATCCACGCCATCATTGATGAGTCG TTGGACAGAGGCTGCTATGACCTGCAGTCGGTGTGGAAGATCGCGGAGGTGGCCATAATG TGTGTGAAGCCCAAGGGCGCCCAGAGGCCTCCCATCTCGGAAGTGCTCAAGGAGATCCAG GACGCCATTGCCATGGAGCGGGTGCTCGTGTCCAATTGCAGCAACAGGATGGGTTCAGGT AGCGTGGAGCAGAATGGAGGAGCATCTTTCGACGAGCTGCTCATGCAGCCGGGTCTCAGA TGAGATGAGAACAACCTACTCGTACCTTGAGTCCATTGATGCTGTTCAGAAACATTACCG TGTGTATTTACAGTCCCGAGTCCATCTTGACCTCCATTTAACAAGGCATACATATTATTA ATTGAAGAGAACTCAGTCTGCATATGTGAAATTGTAGTGTCAATCGTTGCTGCAGTGTTA CTTTCTGTATCATTACACAATGAAGTATCCAATGAACTAGGGAATCGGGCATATGATGGT TGCTCTGAAACATCCAGTAGTATACTATGAAGTTTACCAGTGAGCATCGTAGAATCTACT ATATTATTTGAAGGAGTCACACTACCATTTTGCATCTCTGAACTCCAATCAAGACGCTTA TCAGAACTATATTGACAAGAAAGAACAGTATCCTTATTTTCTGAAGGTAACAAAGGCTCA TTAAGATTGAGATGAGATTGGTCTCTGTCGAAATTCTGATTCATGGGCGCATCAACAGAT GTGCATGGCATTACATCTGGTCGCTGATTTCCTGCCATAATCTGAATCTCATCATTGCCA CCTAATTTTACTGAAGATATATGAACAGATAGCTTCTCCATGTCAGTGTCCCTGGATCTA ATATCCTCCAATATTTTCGCCCCAGCAACATGATTAGATTGGCAGACTACAGCATTTGAA GTAAGGCTAATATTGGTAAGTGAGTGGTCACCATCACTAGTATTTACATCTGATTTAGAT ATTGCTAGACTTGATACAATATTTGGAGGACTTTTGCTGGTACTGGTAGATTTCATTGTT ATGTCTTTCTTAGATAAGACTAGTGGCTTAGATGCTGGATGGGTTAGCTCGCCATTTTCA TTTGCAACTTGATTTTCATCGCTTCCTTTTGACATCCCATCTGATACTACAATCTCATCG TCATTCCAAGCTGAAGGTATTGTCGAGAAGTCTATGTTCAGTGATAACTCAAGTGATGAT GTAGCTTGTGTTGCCATTGAAATACCAGGCTTATACAGCTGCAAGGTTTTGGACTCTTTT T