Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d052276_T005
CDS Infomation

cds chromosome:B73_RefGen_v4:4:185636356:185645200:1 gene:Zm00001d052276 gene_biotype:protein_coding transcript_biotype:protein_coding description:RNA-processing Lsm domain
Sequence

ATGGAGGCTGGCGGCGAGGAGTTCGCGATCGGCGTGGTGATCTCCGCGAAGACCACCCTG
GGGGAGGAGTTCGAGGGCCAGATCGTCGCCTTCGACCGCCCCTCCAACCTCCTCGTTATC
CATATCCTTCGCAAATCGCTCATGCTCGTCACCCGCATCTCCTTGTCATTTACCTATCGG
TCTGGCTGTTTATCACAGGAGGGCGTGGGTAGGGCGGAGAGGGGGGAGCGGAGGAACGTG
AGGGTCCTCAAAGCGAACTACATCCGGGAGTTCTCGGTGGTCAGTAAGGGTGACGACCCT
CTCGATCCTGCCAGCTGCATGCTGGACCTCAACTCCATTTATGCCCGGGAGGATGCTGCA
CTCAGGCAAGCAGAGATTGAAGCTGAGAGAATTGGTGTTGGTGTCACCCCAGAAGCTCAA
AGTATATTTGATGCGCTGTCCAAGACGCTTCCGGTTCAGTGGGACAAGACTGACATTGTC
GTAATGAAGGAGGTTCGTGTACGCAGTCCGTACCTGCCTGAAAATGTTAATGGAGGAACA
GCTGCAGCAAATGAACGCGTTAAGAAAGTGATTGACTTTGAAAGGAAAAGATTACATTCA
CGTGTACCTGGCCAATTCTCTTGA

Peptide Sequence

PEP ID

Zm00001d052276_P005
PEP Infomation

pep chromosome:B73_RefGen_v4:4:185636356:185645200:1 gene:Zm00001d052276 transcript:Zm00001d052276_T005 gene_biotype:protein_coding transcript_biotype:protein_coding description:RNA-processing Lsm domain
Sequence

MEAGGEEFAIGVVISAKTTLGEEFEGQIVAFDRPSNLLVIHILRKSLMLVTRISLSFTYR
SGCLSQEGVGRAERGERRNVRVLKANYIREFSVVSKGDDPLDPASCMLDLNSIYAREDAA
LRQAEIEAERIGVGVTPEAQSIFDALSKTLPVQWDKTDIVVMKEVRVRSPYLPENVNGGT
AAANERVKKVIDFERKRLHSRVPGQFS

Transcript Sequence

Transcript ID

Zm00001d052276_T005
Transcript Infomation

cdna chromosome:B73_RefGen_v4:4:185636356:185645200:1 gene:Zm00001d052276 gene_biotype:protein_coding transcript_biotype:protein_coding description:RNA-processing Lsm domain
Sequence

ATGGAGGCTGGCGGCGAGGAGTTCGCGATCGGCGTGGTGATCTCCGCGAAGACCACCCTG
GGGGAGGAGTTCGAGGGCCAGATCGTCGCCTTCGACCGCCCCTCCAACCTCCTCGTTATC
CATATCCTTCGCAAATCGCTCATGCTCGTCACCCGCATCTCCTTGTCATTTACCTATCGG
TCTGGCTGTTTATCACAGGAGGGCGTGGGTAGGGCGGAGAGGGGGGAGCGGAGGAACGTG
AGGGTCCTCAAAGCGAACTACATCCGGGAGTTCTCGGTGGTCAGTAAGGGTGACGACCCT
CTCGATCCTGCCAGCTGCATGCTGGACCTCAACTCCATTTATGCCCGGGAGGATGCTGCA
CTCAGGCAAGCAGAGATTGAAGCTGAGAGAATTGGTGTTGGTGTCACCCCAGAAGCTCAA
AGTATATTTGATGCGCTGTCCAAGACGCTTCCGGTTCAGTGGGACAAGACTGACATTGTC
GTAATGAAGGAGGTTCGTGTACGCAGTCCGTACCTGCCTGAAAATGTTAATGGAGGAACA
GCTGCAGCAAATGAACGCGTTAAGAAAGTGATTGACTTTGAAAGGAAAAGATTACATTCA
CGTGTACCTGGCCAATTCTCTTGATTAAAAGGCTTGACTATTTTTTACATTAGCCTCGTG
TTGTATTTCTAATACTGCATCCAGTTTTCTTATTCTCATCGATGCGGTTTTCTATAAAAT
GTTTCAGCAAAAATCTGTCGTAATAATCACATCAACTAGCTAGATCTGTACTGTTTGGTA
GTTATTCAGATTTTTATAAAAATATTTTGGATCCAAATAAATGTTTAGGAGATAAATCAG
AATCATTT