Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d052269_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:4:185371637:185375098:1 gene:Zm00001d052269 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PIN-formed protein3 description:Putative auxin efflux carrier
Sequence	ATGATTTCGGCGGCGGACTTGTACCACGTGATGACGGCCGTGGTGCCGTTGTACGTGGCG ATGATCCTGGCGTACGGGTCGGTGCGGTGGTGGCGCATCTTCTCGCCGGACCAGTGCTCC GGGATCAACCGCTTCGTGGCGCTCTTCGCGGTGCCGCTGCTGTCCTTCCACTTCATCTCC ACCAACAACCCCTACACCATGAACCTGCGCTTCATCGCCGCCGACACGCTGCAGAAGCTC ATGGTGCTGGCCATGCTCACCGCGTGGGGCCACCTCAGCCGCCGGGGGCGGGGCAGCCTC GACCTGGACTGGACCATCACGCTCTTCTCCCTCTCCACGCTGCCCAACACGCTCGTCATG GGCATCCCGCTGCTCAGGGGCATGTACGGCGACTTCTCGGGAAGCCTCATGGTGCAGATC GTCGTGCTCCAGTGCATCATCTGGTACACGCTCATGCTCTTCATGTTCGAGTACCGCGCC GCGCGGCTGCTCATCGCCGAGCAGTTCCCGGGCAACGCCGCCGGGGCCATCGCCTCCATC GCCGTCGACCCGGACGTGGTCTCCCTCGTCGACCACGGCCGCGGGGACGCCATCGAGACG GAGGCCGAGGTCAGGGAGGACGGCAGGATACACGTCACCGTGCGCCGCTCCAGCGCGTCG CGCTCCGACGTCGTCTACTCGCGCCGCTCCGTGGGCGGCTTCTCCGGCGCCACCCCGCGC CCCAGCAACCTCACCAACGCCGAGATCTACTCCCTGCAGTCGTCGCGCAACCCGACGCCG CGGGGATCCAGCTTCAACCACACCGACTTCTACTCCATGGTCGGCCGCAGCTCCAACTTC GGCGCGGCCGACGCGTTCGGCGCCGTCCGCACCGGCGCCGGCACCACGCCGCGCCCGTCC AACTACGAGGACGACGCGTCCAGGCCCAAGTACCCGCTGCCCGTGGTGAGTGCGGCGCCC GGGGTGGCAGGCCACTACCCGGCGCCCTGGAGCGCCAGGAAGGCGGCGACGAACGGGCAT GCCAAGGGCGAGGACCTCCACATGTTCGTCTGGAGCTCCAGCGCGTCACCCGTATCGGAC TTCTTCGGCGGCGGCGCGCCGGACTACAACGACCACGCCGCGGCCGCCAAGTCTCCCCGC AAAATGGACGGAGGAGCCAGGGACAGGGACGACTACGTGGAGCGCGACGAGTTCAGCTTC GGGAACAGGGGCGCGATGGAGGACAGGGACGCGGAGGACCCGGCGGCGGCGGGCGGGGAC CCTAACGCGGTGGCCGCGGCGACGGCGATGCCGCCGACGAGCGTGATGACCCGGCTGATC CTGATCATGGTGTGGCGCAAGCTGATCCGCAACCCGAACACCTACTCCAGCCTCATCGGC GTCGTCTGGTCGCTCGTCTGCTTCAGGTGGAACTTCCAGATGCCGGACATCGTCCTGCAC TCCATCTCCATCCTGTCGGACGCGGGGCTCGGAATGGCCATGTTCAGCCTCGGGCTGTTC ATGGCGCTGCAGCCGCGGATCATCGCGTGCGGGAACAAGGTGGCCACGTTCGCCATGGCG GTGCGCTTCCTGACCGGCCCGGCCGTCATGGCGGCCGCGTCCTTCGCCGTGGGCCTCCGC GGCACGCTGCTGCACGTCGCCATCGTCCAGGCAGCTCTGCCCCAGGGCATTGTCCCCTTC GTCTTCGCAAAGGAGTACAGCGTGCACCCTGACATTCTCAGCACCGCAGTCATTTTTGGC ATGCTCATCGCCCTGCCGATCACGCTCGTCTACTACATCCTGCTCGGCCTGTGA

Peptide Sequence

PEP ID	Zm00001d052269_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:4:185371637:185375098:1 gene:Zm00001d052269 transcript:Zm00001d052269_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PIN-formed protein3 description:Putative auxin efflux carrier
Sequence	MISAADLYHVMTAVVPLYVAMILAYGSVRWWRIFSPDQCSGINRFVALFAVPLLSFHFIS TNNPYTMNLRFIAADTLQKLMVLAMLTAWGHLSRRGRGSLDLDWTITLFSLSTLPNTLVM GIPLLRGMYGDFSGSLMVQIVVLQCIIWYTLMLFMFEYRAARLLIAEQFPGNAAGAIASI AVDPDVVSLVDHGRGDAIETEAEVREDGRIHVTVRRSSASRSDVVYSRRSVGGFSGATPR PSNLTNAEIYSLQSSRNPTPRGSSFNHTDFYSMVGRSSNFGAADAFGAVRTGAGTTPRPS NYEDDASRPKYPLPVVSAAPGVAGHYPAPWSARKAATNGHAKGEDLHMFVWSSSASPVSD FFGGGAPDYNDHAAAAKSPRKMDGGARDRDDYVERDEFSFGNRGAMEDRDAEDPAAAGGD PNAVAAATAMPPTSVMTRLILIMVWRKLIRNPNTYSSLIGVVWSLVCFRWNFQMPDIVLH SISILSDAGLGMAMFSLGLFMALQPRIIACGNKVATFAMAVRFLTGPAVMAAASFAVGLR GTLLHVAIVQAALPQGIVPFVFAKEYSVHPDILSTAVIFGMLIALPITLVYYILLGL

Transcript Sequence

Transcript ID	Zm00001d052269_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:185371637:185375098:1 gene:Zm00001d052269 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PIN-formed protein3 description:Putative auxin efflux carrier
Sequence	AACACACTCCTTCCTTCCTTCCTTCTTTCTCAGTCACTCCTCGCTAGCTCTATCTGAGTG AATTAAACTGCTCAGGGCTCACTGGCTCCTCTCAGCGCTAAGCCCAGCTGTAAAGCTAAG GTTCCGACTTCCAAGCAGTGTGGTCGCCGGAAGAGCGTAGCGAGCGGCGTTCAGCTCACC AGCGTTGCATTGGAAGGAAGGGCGAGAGACGGAGCGAGGGCAAGATGATTTCGGCGGCGG ACTTGTACCACGTGATGACGGCCGTGGTGCCGTTGTACGTGGCGATGATCCTGGCGTACG GGTCGGTGCGGTGGTGGCGCATCTTCTCGCCGGACCAGTGCTCCGGGATCAACCGCTTCG TGGCGCTCTTCGCGGTGCCGCTGCTGTCCTTCCACTTCATCTCCACCAACAACCCCTACA CCATGAACCTGCGCTTCATCGCCGCCGACACGCTGCAGAAGCTCATGGTGCTGGCCATGC TCACCGCGTGGGGCCACCTCAGCCGCCGGGGGCGGGGCAGCCTCGACCTGGACTGGACCA TCACGCTCTTCTCCCTCTCCACGCTGCCCAACACGCTCGTCATGGGCATCCCGCTGCTCA GGGGCATGTACGGCGACTTCTCGGGAAGCCTCATGGTGCAGATCGTCGTGCTCCAGTGCA TCATCTGGTACACGCTCATGCTCTTCATGTTCGAGTACCGCGCCGCGCGGCTGCTCATCG CCGAGCAGTTCCCGGGCAACGCCGCCGGGGCCATCGCCTCCATCGCCGTCGACCCGGACG TGGTCTCCCTCGTCGACCACGGCCGCGGGGACGCCATCGAGACGGAGGCCGAGGTCAGGG AGGACGGCAGGATACACGTCACCGTGCGCCGCTCCAGCGCGTCGCGCTCCGACGTCGTCT ACTCGCGCCGCTCCGTGGGCGGCTTCTCCGGCGCCACCCCGCGCCCCAGCAACCTCACCA ACGCCGAGATCTACTCCCTGCAGTCGTCGCGCAACCCGACGCCGCGGGGATCCAGCTTCA ACCACACCGACTTCTACTCCATGGTCGGCCGCAGCTCCAACTTCGGCGCGGCCGACGCGT TCGGCGCCGTCCGCACCGGCGCCGGCACCACGCCGCGCCCGTCCAACTACGAGGACGACG CGTCCAGGCCCAAGTACCCGCTGCCCGTGGTGAGTGCGGCGCCCGGGGTGGCAGGCCACT ACCCGGCGCCCTGGAGCGCCAGGAAGGCGGCGACGAACGGGCATGCCAAGGGCGAGGACC TCCACATGTTCGTCTGGAGCTCCAGCGCGTCACCCGTATCGGACTTCTTCGGCGGCGGCG CGCCGGACTACAACGACCACGCCGCGGCCGCCAAGTCTCCCCGCAAAATGGACGGAGGAG CCAGGGACAGGGACGACTACGTGGAGCGCGACGAGTTCAGCTTCGGGAACAGGGGCGCGA TGGAGGACAGGGACGCGGAGGACCCGGCGGCGGCGGGCGGGGACCCTAACGCGGTGGCCG CGGCGACGGCGATGCCGCCGACGAGCGTGATGACCCGGCTGATCCTGATCATGGTGTGGC GCAAGCTGATCCGCAACCCGAACACCTACTCCAGCCTCATCGGCGTCGTCTGGTCGCTCG TCTGCTTCAGGTGGAACTTCCAGATGCCGGACATCGTCCTGCACTCCATCTCCATCCTGT CGGACGCGGGGCTCGGAATGGCCATGTTCAGCCTCGGGCTGTTCATGGCGCTGCAGCCGC GGATCATCGCGTGCGGGAACAAGGTGGCCACGTTCGCCATGGCGGTGCGCTTCCTGACCG GCCCGGCCGTCATGGCGGCCGCGTCCTTCGCCGTGGGCCTCCGCGGCACGCTGCTGCACG TCGCCATCGTCCAGGCAGCTCTGCCCCAGGGCATTGTCCCCTTCGTCTTCGCAAAGGAGT ACAGCGTGCACCCTGACATTCTCAGCACCGCAGTCATTTTTGGCATGCTCATCGCCCTGC CGATCACGCTCGTCTACTACATCCTGCTCGGCCTGTGACCGTCTCATCCCCATGGAGTCG AGGATGCCACCCCCTGCAGTGCTGCAACTGTAAAGACCACTGCTGCTGTCACATCCCGTT CATGGGAGAGGGAGATAAGGCCAGGAAGGACGGGAGATAGAGCTGCTACGACATTGTTTG GCGCTTGCAAAAGAGTGGCGTGTTTTCTCTCTCTCTATCTATCTAGAAGTAGGTATGGGG ATTGGGTCTGGGTGGATCCTCGCAAAAAAAAGGGTGGGAGGTGGACAAGATGCGGTGGCA AAACGGACCAAAAGCAGGCAGGCGCAAGTACAAAGGAGATCCAGTTTGAGCAGGTCACGA GATCGAGATGGCTTGGTTTTTTTTCGACGGGTTTAGGGAATTTTGGTAGGCCGCGCTGAT TGATGTGAAATCAACGCCATTCTGAGTTATGACAGGAGAGATTTGATCTAGCTTGAGATA AAGAGCTCACCTCATGAGTTTGGTGGATTGAGACACGGGCACGGGATTTGGCTGGAATTT AAGGTTGATCTTTCGTTTAATTGTAAAAAAAATGAATTGATTCCTATATAAGATACTTAA ATGATTTCTATAAAGTTCCAAGTGGTAACGACTCAACTGGAT