Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d052260_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:4:185139277:185141193:-1 gene:Zm00001d052260 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable galacturonosyltransferase 9
Sequence

ATGGCCGGTGCCCGGGCCTCCGCACGTCGTCGCGTGGCGCTCGCGGCTGTCATCACCCTG
ATCCTCCTCGCCTCCGTGTCTTTCCTCCTGTCCGCGACCGCCACCAGCTCTGCCGCCGCA
GCCTCCCCGGCATCGCGCCTGGCCATCGTGCAACGCCACGCCGAGGACCACGCGGCCGTC
CTGGCGGCCTACACGGCCCACGCGCGCCACCTCAGCGCGGCCTCGGCCTCCCAGACGGAC
GCCTTCCTCTCCATCTCCTCGCGCCTCTCCGCCCTCGCCGCCCGTCTCTCGGTCTCCACC
GTGGCGGCCCTGGAGAAGGAGATCAAGGCCCAGGTGAAGCGCGCGCGCTCCCTCGCGGGC
GGCGCCAAGGAGGCGTTCGACACGCAGTCCAAGACCCAGAAGCTCTCCGACACCGTATTC
GCCGTGGGGCAGCAGCTCCTCCGCGCGCGCCGCGCGGGAGTGCTCAACTCCCGCATCGCC
GCGTGGTCCACGCCCAAGTCGCTCCACTGCCTCGCCATGCGCCTCCTGGAGGCCCGCCTC
GCGAACGCCTCCGCCATCCCCGACGAGGCCCCCGTCGCGCCGCCCCAGCTCGCGGACCCG
TCGCTCTACCACTACGCCGTCTTCTCCGACAACGTGCTCGCCGTCTCCGTCGTGGTGGCC
TCGGCGGCGCGCGCGGCCGCCGAGCCCTCGCGCCACGTCTTCCACGTGGTCACGGCGCCC
ATGTACCTCCCGGCCTTCCGCGTCTGGTTCGCGCGCCGCCCGCCGCCGCTCGGCGCGCAC
GTGCAGCTCCTGTCCGTCTCCGACTTCCCGTTCCTGAACGCGACCTACTCGCCGGTGCTC
AGGCAGGTCGAGGACGGGAACAGGGACGTGGCGCTGCTGGACTACCTCCGGTTCTACCTC
CCGGAGATGTTCCCGGCGCTGCGGAGAGTGGTGCTCCTGGAGGACGACGTGGTGGTGCAG
AGGGACCTGGCGGGGCTGTGGCGCGTCGACATGGGCGCCAACGTGAACGCCGCGCTGCAC
ACGTGCTTCGGAGGGTTCCGGCGGTACGGCAAGTACCTCAACTTCTCGGAACCCGTCGTG
CGGGAGAGCTTCAGCGATCGCGCCTGCGCCTGGTCCTACGGCGTCAACGTGTTCGACCTC
CAGGCGTGGCGCCGGGAGCAATGCACCGAGCAGTTCCACCGATTCATGGAAATGAACGAG
AACGGCACGCTCTGGGATCCGACGTCCGTGCTTCCAGTCGGGCTCATGACATTCTACGGC
AAGACGAAGCCGCTGGACAAGTCATGGCACGTGATGGGGCTCGGCTACAACCCACACATC
AGGCCCGAGGACATCCGTGGAGCTGCGGTGATACACTTCAACGGGAACATGAAGCCATGG
CTGGACGTCGCCTTCAACCAGTACAAGCATCTCTGGACCAAGTATGTCGACACAGAGATG
GAATTTCTGACGCTCTGCAACTTCGGCCTCTGA

Peptide Sequence

PEP ID

Zm00001d052260_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:4:185139277:185141193:-1 gene:Zm00001d052260 transcript:Zm00001d052260_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable galacturonosyltransferase 9
Sequence

MAGARASARRRVALAAVITLILLASVSFLLSATATSSAAAASPASRLAIVQRHAEDHAAV
LAAYTAHARHLSAASASQTDAFLSISSRLSALAARLSVSTVAALEKEIKAQVKRARSLAG
GAKEAFDTQSKTQKLSDTVFAVGQQLLRARRAGVLNSRIAAWSTPKSLHCLAMRLLEARL
ANASAIPDEAPVAPPQLADPSLYHYAVFSDNVLAVSVVVASAARAAAEPSRHVFHVVTAP
MYLPAFRVWFARRPPPLGAHVQLLSVSDFPFLNATYSPVLRQVEDGNRDVALLDYLRFYL
PEMFPALRRVVLLEDDVVVQRDLAGLWRVDMGANVNAALHTCFGGFRRYGKYLNFSEPVV
RESFSDRACAWSYGVNVFDLQAWRREQCTEQFHRFMEMNENGTLWDPTSVLPVGLMTFYG
KTKPLDKSWHVMGLGYNPHIRPEDIRGAAVIHFNGNMKPWLDVAFNQYKHLWTKYVDTEM
EFLTLCNFGL

Transcript Sequence

Transcript ID

Zm00001d052260_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:4:185139277:185141193:-1 gene:Zm00001d052260 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable galacturonosyltransferase 9
Sequence

GCCGCCATTTCCTCGTCCAGGGCCAGGCCCTCTCGAACTCACACGACGCGCTCGCCATGG
CCGGTGCCCGGGCCTCCGCACGTCGTCGCGTGGCGCTCGCGGCTGTCATCACCCTGATCC
TCCTCGCCTCCGTGTCTTTCCTCCTGTCCGCGACCGCCACCAGCTCTGCCGCCGCAGCCT
CCCCGGCATCGCGCCTGGCCATCGTGCAACGCCACGCCGAGGACCACGCGGCCGTCCTGG
CGGCCTACACGGCCCACGCGCGCCACCTCAGCGCGGCCTCGGCCTCCCAGACGGACGCCT
TCCTCTCCATCTCCTCGCGCCTCTCCGCCCTCGCCGCCCGTCTCTCGGTCTCCACCGTGG
CGGCCCTGGAGAAGGAGATCAAGGCCCAGGTGAAGCGCGCGCGCTCCCTCGCGGGCGGCG
CCAAGGAGGCGTTCGACACGCAGTCCAAGACCCAGAAGCTCTCCGACACCGTATTCGCCG
TGGGGCAGCAGCTCCTCCGCGCGCGCCGCGCGGGAGTGCTCAACTCCCGCATCGCCGCGT
GGTCCACGCCCAAGTCGCTCCACTGCCTCGCCATGCGCCTCCTGGAGGCCCGCCTCGCGA
ACGCCTCCGCCATCCCCGACGAGGCCCCCGTCGCGCCGCCCCAGCTCGCGGACCCGTCGC
TCTACCACTACGCCGTCTTCTCCGACAACGTGCTCGCCGTCTCCGTCGTGGTGGCCTCGG
CGGCGCGCGCGGCCGCCGAGCCCTCGCGCCACGTCTTCCACGTGGTCACGGCGCCCATGT
ACCTCCCGGCCTTCCGCGTCTGGTTCGCGCGCCGCCCGCCGCCGCTCGGCGCGCACGTGC
AGCTCCTGTCCGTCTCCGACTTCCCGTTCCTGAACGCGACCTACTCGCCGGTGCTCAGGC
AGGTCGAGGACGGGAACAGGGACGTGGCGCTGCTGGACTACCTCCGGTTCTACCTCCCGG
AGATGTTCCCGGCGCTGCGGAGAGTGGTGCTCCTGGAGGACGACGTGGTGGTGCAGAGGG
ACCTGGCGGGGCTGTGGCGCGTCGACATGGGCGCCAACGTGAACGCCGCGCTGCACACGT
GCTTCGGAGGGTTCCGGCGGTACGGCAAGTACCTCAACTTCTCGGAACCCGTCGTGCGGG
AGAGCTTCAGCGATCGCGCCTGCGCCTGGTCCTACGGCGTCAACGTGTTCGACCTCCAGG
CGTGGCGCCGGGAGCAATGCACCGAGCAGTTCCACCGATTCATGGAAATGAACGAGAACG
GCACGCTCTGGGATCCGACGTCCGTGCTTCCAGTCGGGCTCATGACATTCTACGGCAAGA
CGAAGCCGCTGGACAAGTCATGGCACGTGATGGGGCTCGGCTACAACCCACACATCAGGC
CCGAGGACATCCGTGGAGCTGCGGTGATACACTTCAACGGGAACATGAAGCCATGGCTGG
ACGTCGCCTTCAACCAGTACAAGCATCTCTGGACCAAGTATGTCGACACAGAGATGGAAT
TTCTGACGCTCTGCAACTTCGGCCTCTGAAAGACTATTACGAGTATAGCTCTGCGTCTGA
ACAACGAACGTCTTCAGCGCTGACGTGAGTGACCTGCGCCGAAGCTTGCGGTCAGCGTGA
GTGACGCTTAACTTAAGTAGTAGTCAGTGCAGAGTTGCAATCTTGCTGCTAGGCAGCGTT
TTGCCCGTGGATGTCCTAGCTTGCTCCCTTGTGTTTATGTGTGATGGCACTTTGCAAACT
AGGAGACTGCACCGTTGCGATATGACTGAAAAATTGCAAAACAAAACATTGGGATAAAAG
AGTAGCCACAATG