Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d052237_T003
CDS Infomation

cds chromosome:B73_RefGen_v4:4:184283306:184292618:-1 gene:Zm00001d052237 gene_biotype:protein_coding transcript_biotype:protein_coding description:Aspartic proteinase-like protein 1
Sequence

ATGACCGATACCGTCTCCGACCTCCTCCCTTTTGCGCTAGCTTCAGAGCATCATCACCAC
TCCACACCACCGCCCCAGCTCGCTTCCCTCCCCGCTACACGGTCGCTCACCAGTCACCAC
CCACCACTGCTTCCATGCTCCTCGCCTCGTTTCCAGCTCGCGAAACTTAGCTCCAGATCC
TCTCCCCCCCCCCCCCCCATCCACCGCGCCGCATTAACCTCAGATCCACCCGGCGAGCTC
ATTTCAGATCCATCCATGCGCTTCCCGTTCCTTTTCGCCCTCCAGCTGGTCGCCTTGGCG
GCGGCAGCGTCGGCGGCCGAGGTCGCGGTGACGCGCTCTTCGAGGATGGTGCACCGTCTG
TCAGACGAGGCCCGGCTGGAGGTGGGCCCGCGTGTGGGGTGGTGGCCGCAGCGAGGAAGC
GGGGAGTACTACCGCGCGCTAGTGAGGAGCGATATCCAGCGGCAGAAGCGGCGGCTCGCG
GTCCTCTCGCTCTCAAAGGGCGGCAGCACCTTCTCCCCGGGCAACGACTTAGGCTGGCTA
TATTACGCTTGGGTGGATGTTGGGACGCCTGCTACCTCCTTTTTGGTTGCATTGGATACT
GGTAGTGACCTTTTCTGGGTTCCCTGTGACTGTATCCAGTGTGCTCCCTTGTCTGGCTAC
CGTGGAAATCTGGATAGAGATCTTAGAATATACAGGCCTGCTGAATCGACAACAAGTCGG
CATCTTCCTTGCAGCCATGAGCTATGCCAATCGGTTCCAGGCTGCACAAACCCAAAGCAG
CCTTGCCCATACAACATTGACTACTTTTCAGAAAATACTACCAGCTCTGGTTTGCTAATT
GAGGATACACTACACTTGAACTACAGGGAGGACCATGTACCCGTGAATGCTTCAGTTATT
ATTGGCTGTGGTCAAAAGCAAAGTGGTGATTATCTGGATGGTATTGCACCGGATGGACTC
CTTGGCCTTGGAATGGCAGATATTTCAGTTCCTAGTTTCCTTGCTAGAGCTGGACTAGTT
CAGAATTCCTTCTCGATGTGCTTTAAGGAAGATAGTTCTGGGAGAATTTTCTTTGGAGAC
CAAGGAGTGCCCTCTCAACAGTCTACACCGTTTGTTCCTCTGTATGGCAAACTTCAAACT
TATGCTGTTAATGTCGACAAATCTTGTATTGGACATAAATGTCTTGAGGGTACTAGCTTC
AAGGCTTTAGTCGATAGTGGAACATCATTTACTTCTCTTCCTTTCGACGTTTACAAGGCT
TTCACAATGGAGTTTGACAAACAAATGAATGCTACAAGGGTGCCTTATGAAGACACTACC
TGGAAATATTGCTACAGTGCTAGTCCTCTTGAGATGCCTGATGTGCCAACCATAACCCTG
ACATTTGCTGCGGACAAGAGCTTGCAAGCTGTTAATCCTATCTTGCCATTTAATGACAAA
CAGGGGGCACTTGCCGGGTTCTGCTTAGCTGTGCTGCCATCAACAGAACCCATTGGAATT
ATTGCCCAGAATTTCCTGGTTGGATACCATGTTGTTTTCGACAGAGAAAGCATGAAGCTG
GGCTGGTACCGCTCCGAATGTCGCTACGTTGAGGACAGCACGACAGTGCCGTTGGGCCCA
TCGCAGCACGACAGTCCAGAGGACCCGTTGCCGTCGAACGAGCAGCAGACTTCCCCGGCC
GTGACGCCTGCGACGGCAGGCACGGCTCCGCTCTCCTGTGCGACGACGAATCTGCAGATG
CTCCTTGCTAGCTCTTACCCATTGCTGTTGCTGACGATGTCGAGTGTGTTCTTCGTCTCG
TGA

Peptide Sequence

PEP ID

Zm00001d052237_P003
PEP Infomation

pep chromosome:B73_RefGen_v4:4:184283306:184292618:-1 gene:Zm00001d052237 transcript:Zm00001d052237_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:Aspartic proteinase-like protein 1
Sequence

MTDTVSDLLPFALASEHHHHSTPPPQLASLPATRSLTSHHPPLLPCSSPRFQLAKLSSRS
SPPPPPIHRAALTSDPPGELISDPSMRFPFLFALQLVALAAAASAAEVAVTRSSRMVHRL
SDEARLEVGPRVGWWPQRGSGEYYRALVRSDIQRQKRRLAVLSLSKGGSTFSPGNDLGWL
YYAWVDVGTPATSFLVALDTGSDLFWVPCDCIQCAPLSGYRGNLDRDLRIYRPAESTTSR
HLPCSHELCQSVPGCTNPKQPCPYNIDYFSENTTSSGLLIEDTLHLNYREDHVPVNASVI
IGCGQKQSGDYLDGIAPDGLLGLGMADISVPSFLARAGLVQNSFSMCFKEDSSGRIFFGD
QGVPSQQSTPFVPLYGKLQTYAVNVDKSCIGHKCLEGTSFKALVDSGTSFTSLPFDVYKA
FTMEFDKQMNATRVPYEDTTWKYCYSASPLEMPDVPTITLTFAADKSLQAVNPILPFNDK
QGALAGFCLAVLPSTEPIGIIAQNFLVGYHVVFDRESMKLGWYRSECRYVEDSTTVPLGP
SQHDSPEDPLPSNEQQTSPAVTPATAGTAPLSCATTNLQMLLASSYPLLLLTMSSVFFVS

Transcript Sequence

Transcript ID

Zm00001d052237_T003
Transcript Infomation

cdna chromosome:B73_RefGen_v4:4:184283306:184292618:-1 gene:Zm00001d052237 gene_biotype:protein_coding transcript_biotype:protein_coding description:Aspartic proteinase-like protein 1
Sequence

AAATGACCGATACCGTCTCCGACCTCCTCCCTTTTGCGCTAGCTTCAGAGCATCATCACC
ACTCCACACCACCGCCCCAGCTCGCTTCCCTCCCCGCTACACGGTCGCTCACCAGTCACC
ACCCACCACTGCTTCCATGCTCCTCGCCTCGTTTCCAGCTCGCGAAACTTAGCTCCAGAT
CCTCTCCCCCCCCCCCCCCCATCCACCGCGCCGCATTAACCTCAGATCCACCCGGCGAGC
TCATTTCAGATCCATCCATGCGCTTCCCGTTCCTTTTCGCCCTCCAGCTGGTCGCCTTGG
CGGCGGCAGCGTCGGCGGCCGAGGTCGCGGTGACGCGCTCTTCGAGGATGGTGCACCGTC
TGTCAGACGAGGCCCGGCTGGAGGTGGGCCCGCGTGTGGGGTGGTGGCCGCAGCGAGGAA
GCGGGGAGTACTACCGCGCGCTAGTGAGGAGCGATATCCAGCGGCAGAAGCGGCGGCTCG
CGGTCCTCTCGCTCTCAAAGGGCGGCAGCACCTTCTCCCCGGGCAACGACTTAGGCTGGC
TATATTACGCTTGGGTGGATGTTGGGACGCCTGCTACCTCCTTTTTGGTTGCATTGGATA
CTGGTAGTGACCTTTTCTGGGTTCCCTGTGACTGTATCCAGTGTGCTCCCTTGTCTGGCT
ACCGTGGAAATCTGGATAGAGATCTTAGAATATACAGGCCTGCTGAATCGACAACAAGTC
GGCATCTTCCTTGCAGCCATGAGCTATGCCAATCGGTTCCAGGCTGCACAAACCCAAAGC
AGCCTTGCCCATACAACATTGACTACTTTTCAGAAAATACTACCAGCTCTGGTTTGCTAA
TTGAGGATACACTACACTTGAACTACAGGGAGGACCATGTACCCGTGAATGCTTCAGTTA
TTATTGGCTGTGGTCAAAAGCAAAGTGGTGATTATCTGGATGGTATTGCACCGGATGGAC
TCCTTGGCCTTGGAATGGCAGATATTTCAGTTCCTAGTTTCCTTGCTAGAGCTGGACTAG
TTCAGAATTCCTTCTCGATGTGCTTTAAGGAAGATAGTTCTGGGAGAATTTTCTTTGGAG
ACCAAGGAGTGCCCTCTCAACAGTCTACACCGTTTGTTCCTCTGTATGGCAAACTTCAAA
CTTATGCTGTTAATGTCGACAAATCTTGTATTGGACATAAATGTCTTGAGGGTACTAGCT
TCAAGGCTTTAGTCGATAGTGGAACATCATTTACTTCTCTTCCTTTCGACGTTTACAAGG
CTTTCACAATGGAGTTTGACAAACAAATGAATGCTACAAGGGTGCCTTATGAAGACACTA
CCTGGAAATATTGCTACAGTGCTAGTCCTCTTGAGATGCCTGATGTGCCAACCATAACCC
TGACATTTGCTGCGGACAAGAGCTTGCAAGCTGTTAATCCTATCTTGCCATTTAATGACA
AACAGGGGGCACTTGCCGGGTTCTGCTTAGCTGTGCTGCCATCAACAGAACCCATTGGAA
TTATTGCCCAGAATTTCCTGGTTGGATACCATGTTGTTTTCGACAGAGAAAGCATGAAGC
TGGGCTGGTACCGCTCCGAATGTCGCTACGTTGAGGACAGCACGACAGTGCCGTTGGGCC
CATCGCAGCACGACAGTCCAGAGGACCCGTTGCCGTCGAACGAGCAGCAGACTTCCCCGG
CCGTGACGCCTGCGACGGCAGGCACGGCTCCGCTCTCCTGTGCGACGACGAATCTGCAGA
TGCTCCTTGCTAGCTCTTACCCATTGCTGTTGCTGACGATGTCGAGTGTGTTCTTCGTCT
CGTGAACAACCGATATACTACTA