Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d052227_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:4:183819885:183822900:-1 gene:Zm00001d052227 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:trehalose-6-phosphate phosphatase4 description: trehalose-6-phosphate phosphatase4
Sequence	ATGACGAACCAGGACGTGGTCGTGTCGGAGATGGGCATTGCGGCCGGGACCGCGCTGCCG GGCTCGAGCCCGGCCCTCCTGGCCTGCCGGGGCGCGGCGGCCGGCGCCATGTCCCTGCGG TACCTCGACCTGGCAGCGGCGGCGGCGCGCTCGGCCAGCTGCACCTGGGTCGAGGCCATG CGCGCCTCCTCGCCCACCCGCTCCCGCGCCGCCGCCGACGTCGACGAGCTCACGGCCTGG ATGAGGAAGCACCCGTCGGCGCTCGGGAAGTTCGAGCAGATTGCCAGCGCGTCCCAGGGG AAGAAGGTCGTCATGTTCCTAGACTACGACGGCACGCTCGCCCCCATCGTCGCCGACCCG GACGCCGCCTACATGAGCGACGTGATGAGAGCGGCGGTGCGCGACGTCGCGAAGCACTTC CCGACGGCGATCGTGAGCGGGCGCTGCCGCGACAAGGTGCGCAGCTTCGTCGACCTGTCG GAGCTCTACTACGCCGGCAGCCATGGCATGGACATCGAAGGACCAAGCTCCAATCCCGAG TCAGTTCTGTGCCAACCTGCGAGCGAGTTCCTCCCCGTGATCGACGAGGTGTACAAGGCG CTGGTGGAGAAGACGAAGTCCACGCCTGGCGCCAAGGTGGAGAACAACAAGTTCTGCCTG TCCGTGCACTTCAGATGTGTAGATGAAAAGAGATGGAACGCATTGGCCGAGCAGGTCAAG GCAGTGATCAAGGACTACCCCAAGCTAAAGCTCACTCAAGGCAGGAAGGTTCTGGAGATC CGTCCGAGCATCATGTGGGACAAGGGCAAGGCCTTGGAGTTTCTGCTCGAATCGCTCGGA TTCGCCAGCTGCAGCGACGCCCTCCCGGTGTACATCGGTGACGACCGCACCGACGAGGAC GCCTTCAAGGTGCTGAGGAAGAGGGGCCAAGGCGTCGGGATCCTCGTGTCCAAGTGCCCC AAGGAGACGAACGCCTCCTACTCGCTGCAGGACCCCGGCGAGGTCATGGACTTCTTGCTC CGCCTGGTGGAGTGGAAGCGGAAATCCACGACGACTCGGCCGCCGGTGTAG

Peptide Sequence

PEP ID	Zm00001d052227_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:4:183819885:183822900:-1 gene:Zm00001d052227 transcript:Zm00001d052227_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:trehalose-6-phosphate phosphatase4 description: trehalose-6-phosphate phosphatase4
Sequence	MTNQDVVVSEMGIAAGTALPGSSPALLACRGAAAGAMSLRYLDLAAAAARSASCTWVEAM RASSPTRSRAAADVDELTAWMRKHPSALGKFEQIASASQGKKVVMFLDYDGTLAPIVADP DAAYMSDVMRAAVRDVAKHFPTAIVSGRCRDKVRSFVDLSELYYAGSHGMDIEGPSSNPE SVLCQPASEFLPVIDEVYKALVEKTKSTPGAKVENNKFCLSVHFRCVDEKRWNALAEQVK AVIKDYPKLKLTQGRKVLEIRPSIMWDKGKALEFLLESLGFASCSDALPVYIGDDRTDED AFKVLRKRGQGVGILVSKCPKETNASYSLQDPGEVMDFLLRLVEWKRKSTTTRPPV

Transcript Sequence

Transcript ID	Zm00001d052227_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:183819885:183822900:-1 gene:Zm00001d052227 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:trehalose-6-phosphate phosphatase4 description: trehalose-6-phosphate phosphatase4
Sequence	CTCAAGCCCTGAGAAGCCCGCACACTCCCCCAGGTCCCTGAGGCTAACTGCGTTCGTCCC GTCCAAGTGCTTCGTGTTGGGACGATCGAGAAAGTCGCCGGGTTTGCCTCCCACGAGCCT GCCCTGCTGCCTGGGGCCGCTGGTGAAGCGGAAGCACATGACGAACCAGGACGTGGTCGT GTCGGAGATGGGCATTGCGGCCGGGACCGCGCTGCCGGGCTCGAGCCCGGCCCTCCTGGC CTGCCGGGGCGCGGCGGCCGGCGCCATGTCCCTGCGGTACCTCGACCTGGCAGCGGCGGC GGCGCGCTCGGCCAGCTGCACCTGGGTCGAGGCCATGCGCGCCTCCTCGCCCACCCGCTC CCGCGCCGCCGCCGACGTCGACGAGCTCACGGCCTGGATGAGGAAGCACCCGTCGGCGCT CGGGAAGTTCGAGCAGATTGCCAGCGCGTCCCAGGGGAAGAAGGTCGTCATGTTCCTAGA CTACGACGGCACGCTCGCCCCCATCGTCGCCGACCCGGACGCCGCCTACATGAGCGACGT GATGAGAGCGGCGGTGCGCGACGTCGCGAAGCACTTCCCGACGGCGATCGTGAGCGGGCG CTGCCGCGACAAGGTGCGCAGCTTCGTCGACCTGTCGGAGCTCTACTACGCCGGCAGCCA TGGCATGGACATCGAAGGACCAAGCTCCAATCCCGAGTCAGTTCTGTGCCAACCTGCGAG CGAGTTCCTCCCCGTGATCGACGAGGTGTACAAGGCGCTGGTGGAGAAGACGAAGTCCAC GCCTGGCGCCAAGGTGGAGAACAACAAGTTCTGCCTGTCCGTGCACTTCAGATGTGTAGA TGAAAAGAGATGGAACGCATTGGCCGAGCAGGTCAAGGCAGTGATCAAGGACTACCCCAA GCTAAAGCTCACTCAAGGCAGGAAGGTTCTGGAGATCCGTCCGAGCATCATGTGGGACAA GGGCAAGGCCTTGGAGTTTCTGCTCGAATCGCTCGGATTCGCCAGCTGCAGCGACGCCCT CCCGGTGTACATCGGTGACGACCGCACCGACGAGGACGCCTTCAAGGTGCTGAGGAAGAG GGGCCAAGGCGTCGGGATCCTCGTGTCCAAGTGCCCCAAGGAGACGAACGCCTCCTACTC GCTGCAGGACCCCGGCGAGGTCATGGACTTCTTGCTCCGCCTGGTGGAGTGGAAGCGGAA ATCCACGACGACTCGGCCGCCGGTGTAGCTCTTGTTCTTGGTCGACTAGTCAATCGATGG ACCGACCGATCGATCGAATGGGCGTCCAATCATGCGCGAAAACATACCCCACCACTGCAA GACCAATTTTTTTTTCTGTCTCTCTCTCTCCCTCTCTCTCCACTCTCTCTGACGATTCTT CAGCTTGTGGTGGCCTCCGAAACCGACGACTCGTGGTGGTTGCTGTGTTACATGTTCTTC GATTCCCTGACCACCGTGTGCTGCCGGCCTCCGCCACCACCGAGCGAGGAAAAAGGAGGC CGGCCGGCCGCACACAAAGCACAGCGTCACTGAAAGTGTTTTGAGCATGTTGGCGCTACT GTCGAATACAGTATCAGTAACCGGTTCTACTCCAAGGCAGTGTACTGTCCCCCCACCCCC ATTATTCTCTCCTGTTGTTTTTGGCCCTAGCTTGTTCCCCATGACTCTGGAAGGCATCGT CGTCTATCTGCAAAGCTACCTGACGTCCTTGAATTGAAGAACCTTTGAAAGAAACAGAGA AGGTTCGGTAATTTCACTTCACCCCCAATTAATATAAGTATGTAACTATAGTAGCTGCTG TATGTCTAGGCACTGTTTACGCACCCTCTCTGTAAGATGTGTACTCCTGGTGAATGAATG TGAGATCCCAAGCAATGGAATTATATTCT