Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d052133_T003
CDS Infomation	cds chromosome:B73_RefGen_v4:4:180559023:180563266:-1 gene:Zm00001d052133 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Homeobox-transcription factor 83 description:Homeodomain leucine zipper family IV protein%3B Putative homeobox/lipid-binding domain family protein
Sequence	ATGGACTTCGGCGACGACGTCATGGACGGCGGCTCCGACGCCCAGCGCCGCAAGAAGAGA TACCACCGCCACACACCGCGCCAGATTCAGCAGCTCGAGGCGATGTTCAAGGAGTGCCCG CACCCGGACGAGAACCAGCGGATGCAGCTGAGCAGGGAGCTGGGGCTGGAGCCCCGGCAG ATCAAGTTCTGGTTCCAGAACCGCCGGACGCAGATGAAGGCGCAGCACGAGCGCCAGGAC AACTGCTTCCTGCGCGCGGAGAACGACAAGATCCGGTGCGAGAACATCGCCATGCGGGAG GCGCTCCGGAGCGTCATCTGCCCCACCTGCGGCGGCCCGCCCGTCGCCGACGACTACTTC GACGAGCAGAAGCTGCGCATGGAGAACGCGCGACTCAAAGAAGAGCTTGACCGGGTGTCC AGCCTGACGTCCAAGTACCTGGGGCGGCCCATCACGCAGCTGCCGCCGGCGCAGGCGGCG CTGTCCATGTCGTCGCTGGACCTGTCCGTCGGCGGGCTCGGCAGCCCGTCGCTGGACCTC GACCTCCTCAGCGGCGGCTCCTCGGGGTATCCCCCGTTCCACCTCCCGATGCCGGTGTCG GAGATGGAGCGGCCCATGATGGCCGAGATGGCGACGCGCGCCATGGACGAGCTCATCAGG ATGGCGCAGGCCGGCGAGCACCTGTGGGTCAAGGCGGGCGGCCGCGAGGTGCTCAACGTC GACACGTACGACAGCGTCTTCGCCAAGCCCGGGGCCGCCTCGTTCCGCGGCCCCGACGTG CACGTCGAGGGGTCCCGCGACTCGGGCCTAGTCTTCATGAGCGCCGTCGGCCTCGTCGAC ATGTTCATGGACTCGAGCAAGTGGACGGAGTTTTTCCCTGCCATCGTGTCCAAGGCGCGC ACGGTCGACGTCCTCGTGAACGGCATGGCCGGGCGGAGCGAGTCTTTGGTTCTGATGTAC GAGGAGCTGCACGTGATGTCGCCGGTCGTCCCGACGCGCGAGTTCTGCTTCCTGCGCTAC TGCCGGCAGATCGAGCGCGGGCTGTGGGCGATCGCGGACATCTCGGTGGACCTGCAGCAG CACGACGCGAGGTTCGGCGCGCCGCCGTCGCGCTCGTGCCGCCTCCCGTCGGGATGCCTC ATCGCCGATATGGCCGACGGCTCCTCCAAGGTGACATGGGTGGAGCACATGGAGATCGAG GACAGGGTTCCCATCCACCTGCTCTACCGCGACCTCATCCTCAGCGGCGCCGCGTTCGGG GCGCACCGGTGGCTCGCCGCCCTGCAGAGGGCGTGCGAGCGGTGCGCGTGCCTCGTCCCG GCCGGTATGCCGCACCGCGACATTGCAGTTGCAGGAGTGACGCCGGAAGGGAAACGGAGC ATGATGAAGCTGTCGCAGCGGATGGTGAGCAGCTTCTGCGCGAGCCTGAGCGCGTCGCAG CTCCACCGGTGGACGACGCTGTCGGGGCCCAGCGACGTGGGCGTCCGCGTCACGGTGCAC CGCAGCACGGACCCGGGGCAGCCCAGCGGCGTGGTGCTCAGCGCGGCCACGTCCATCTGG CTGCCGGTCCCGTGCGACCGGGTGTTCGCCTTCGTCCGCGACGAGCACACGCGCTCCCAG TGGGACGTGCTGTCGCACGGGAACCCGGTGCAGGAGGTGTCGCGCATCCCCAACGGCTCC CACCCAGGGAACTGCATCTCCTTGCTCAGAGGCCTGAACGCGAGCCAGAACAGCATGCTG ATCCTGCAGGAGAGCTGCACCGACGGGACGGGGTCGCTGGTGGTGTACGCGCCGATCGAC ATCCCGGCGGCCAACGTGGTGATGAGCGGCGAGGACCCGTCCGCGATCCCGCTCCTGCCG TCGGGCTTCACCATCCTGCCGGACGGGCGGCCCGGCGCGCCGTCGTCGTCGAGCGCCGGC GGCCCGCTGGTGGGCTCCCCCGCGGCGGCGGGGTCGCTGGTGACGGTGGCGTTCCAGATC CTGGTGAGCAGCCTGCCGTCGTCGAGGCTGAACGCCGAGTCGGTGGCCACGGTCAACAGC CTCATCAGCACCACTGTGGAGCAAATCAAGGCGGCCTTGAATTGTGCCAGCCATTGA

Peptide Sequence

PEP ID	Zm00001d052133_P003
PEP Infomation	pep chromosome:B73_RefGen_v4:4:180559023:180563266:-1 gene:Zm00001d052133 transcript:Zm00001d052133_T003 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Homeobox-transcription factor 83 description:Homeodomain leucine zipper family IV protein%3B Putative homeobox/lipid-binding domain family protein
Sequence	MDFGDDVMDGGSDAQRRKKRYHRHTPRQIQQLEAMFKECPHPDENQRMQLSRELGLEPRQ IKFWFQNRRTQMKAQHERQDNCFLRAENDKIRCENIAMREALRSVICPTCGGPPVADDYF DEQKLRMENARLKEELDRVSSLTSKYLGRPITQLPPAQAALSMSSLDLSVGGLGSPSLDL DLLSGGSSGYPPFHLPMPVSEMERPMMAEMATRAMDELIRMAQAGEHLWVKAGGREVLNV DTYDSVFAKPGAASFRGPDVHVEGSRDSGLVFMSAVGLVDMFMDSSKWTEFFPAIVSKAR TVDVLVNGMAGRSESLVLMYEELHVMSPVVPTREFCFLRYCRQIERGLWAIADISVDLQQ HDARFGAPPSRSCRLPSGCLIADMADGSSKVTWVEHMEIEDRVPIHLLYRDLILSGAAFG AHRWLAALQRACERCACLVPAGMPHRDIAVAGVTPEGKRSMMKLSQRMVSSFCASLSASQ LHRWTTLSGPSDVGVRVTVHRSTDPGQPSGVVLSAATSIWLPVPCDRVFAFVRDEHTRSQ WDVLSHGNPVQEVSRIPNGSHPGNCISLLRGLNASQNSMLILQESCTDGTGSLVVYAPID IPAANVVMSGEDPSAIPLLPSGFTILPDGRPGAPSSSSAGGPLVGSPAAAGSLVTVAFQI LVSSLPSSRLNAESVATVNSLISTTVEQIKAALNCASH

Transcript Sequence

Transcript ID	Zm00001d052133_T003
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:180559023:180563266:-1 gene:Zm00001d052133 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Homeobox-transcription factor 83 description:Homeodomain leucine zipper family IV protein%3B Putative homeobox/lipid-binding domain family protein
Sequence	GAGAGAGCGCCTCCCTCCTGAGCTGTAGCGTGCTGCTCCGTCAGGACCAGCGAGATTACT GCCGCGTACCTCCCGCTACCACCACCACCACTGCTCTGTTTGCTGCGTAGCAGCGGCCGG GGCTATATAGCGCCTCGGAGGAGGAGCTAGGTATAGACCTCGTGGCACTAGCACAGCCGC CCGCTATATACCGCTAGTGCACTACTAGCTGCTTGCCAGGTCCCAGCCAGCCAGCCAGCC CTCTCGTCCCGGATTGCGCTCGAAGCAAGCGGCCGCCCGAGGCGAGGCGAGGCGTGCGCG CGCCGCGAGACGATGGACTTCGGCGACGACGTCATGGACGGCGGCTCCGACGCCCAGCGC CGCAAGAAGAGATACCACCGCCACACACCGCGCCAGATTCAGCAGCTCGAGGCGATGTTC AAGGAGTGCCCGCACCCGGACGAGAACCAGCGGATGCAGCTGAGCAGGGAGCTGGGGCTG GAGCCCCGGCAGATCAAGTTCTGGTTCCAGAACCGCCGGACGCAGATGAAGGCGCAGCAC GAGCGCCAGGACAACTGCTTCCTGCGCGCGGAGAACGACAAGATCCGGTGCGAGAACATC GCCATGCGGGAGGCGCTCCGGAGCGTCATCTGCCCCACCTGCGGCGGCCCGCCCGTCGCC GACGACTACTTCGACGAGCAGAAGCTGCGCATGGAGAACGCGCGACTCAAAGAAGAGCTT GACCGGGTGTCCAGCCTGACGTCCAAGTACCTGGGGCGGCCCATCACGCAGCTGCCGCCG GCGCAGGCGGCGCTGTCCATGTCGTCGCTGGACCTGTCCGTCGGCGGGCTCGGCAGCCCG TCGCTGGACCTCGACCTCCTCAGCGGCGGCTCCTCGGGGTATCCCCCGTTCCACCTCCCG ATGCCGGTGTCGGAGATGGAGCGGCCCATGATGGCCGAGATGGCGACGCGCGCCATGGAC GAGCTCATCAGGATGGCGCAGGCCGGCGAGCACCTGTGGGTCAAGGCGGGCGGCCGCGAG GTGCTCAACGTCGACACGTACGACAGCGTCTTCGCCAAGCCCGGGGCCGCCTCGTTCCGC GGCCCCGACGTGCACGTCGAGGGGTCCCGCGACTCGGGCCTAGTCTTCATGAGCGCCGTC GGCCTCGTCGACATGTTCATGGACTCGAGCAAGTGGACGGAGTTTTTCCCTGCCATCGTG TCCAAGGCGCGCACGGTCGACGTCCTCGTGAACGGCATGGCCGGGCGGAGCGAGTCTTTG GTTCTGATGTACGAGGAGCTGCACGTGATGTCGCCGGTCGTCCCGACGCGCGAGTTCTGC TTCCTGCGCTACTGCCGGCAGATCGAGCGCGGGCTGTGGGCGATCGCGGACATCTCGGTG GACCTGCAGCAGCACGACGCGAGGTTCGGCGCGCCGCCGTCGCGCTCGTGCCGCCTCCCG TCGGGATGCCTCATCGCCGATATGGCCGACGGCTCCTCCAAGGTGACATGGGTGGAGCAC ATGGAGATCGAGGACAGGGTTCCCATCCACCTGCTCTACCGCGACCTCATCCTCAGCGGC GCCGCGTTCGGGGCGCACCGGTGGCTCGCCGCCCTGCAGAGGGCGTGCGAGCGGTGCGCG TGCCTCGTCCCGGCCGGTATGCCGCACCGCGACATTGCAGTTGCAGGAGTGACGCCGGAA GGGAAACGGAGCATGATGAAGCTGTCGCAGCGGATGGTGAGCAGCTTCTGCGCGAGCCTG AGCGCGTCGCAGCTCCACCGGTGGACGACGCTGTCGGGGCCCAGCGACGTGGGCGTCCGC GTCACGGTGCACCGCAGCACGGACCCGGGGCAGCCCAGCGGCGTGGTGCTCAGCGCGGCC ACGTCCATCTGGCTGCCGGTCCCGTGCGACCGGGTGTTCGCCTTCGTCCGCGACGAGCAC ACGCGCTCCCAGTGGGACGTGCTGTCGCACGGGAACCCGGTGCAGGAGGTGTCGCGCATC CCCAACGGCTCCCACCCAGGGAACTGCATCTCCTTGCTCAGAGGCCTGAACGCGAGCCAG AACAGCATGCTGATCCTGCAGGAGAGCTGCACCGACGGGACGGGGTCGCTGGTGGTGTAC GCGCCGATCGACATCCCGGCGGCCAACGTGGTGATGAGCGGCGAGGACCCGTCCGCGATC CCGCTCCTGCCGTCGGGCTTCACCATCCTGCCGGACGGGCGGCCCGGCGCGCCGTCGTCG TCGAGCGCCGGCGGCCCGCTGGTGGGCTCCCCCGCGGCGGCGGGGTCGCTGGTGACGGTG GCGTTCCAGATCCTGGTGAGCAGCCTGCCGTCGTCGAGGCTGAACGCCGAGTCGGTGGCC ACGGTCAACAGCCTCATCAGCACCACTGTGGAGCAAATCAAGGCGGCCTTGAATTGTGCC AGCCATTGATGGATCCCCGGCTGATGGATCCATGGAATTTGGTGCGGGCGTGCGTGCGTG CATGCATGCGCGCGCGTTGGTCTCGGTCTCCTCTCCTCTCGTCCCCCAGCCGGCCGCCTG CCGCCTGCCTGGTGGCTGCTGCGAGGAGTGAATTCCCTTCAAGGCGTTGGTTCGCGACGG AGCTCTTGGTTGGTCGGGGGGGCTTCAATGCTGGCTGGCCATTCAAGGAGGCGGGGGCTG CTGCCATGGTGTCGCCCGCTTGGGGTTCACCTGCCGCTGTTACTGCGCCGTCCGATCACC GGCCCATGATCATTCAGCTCTGTCTCTCTCTCTCTACCTCTACCCCTTTCTCTGCATGCA TGATAACTTTTCCTGTTACAGGATTTGAAGCTTGCTTGCCGGCGAGGCTTTGCACGAAAC GGGGGAGTCAAGAACGCACCATGCTCGTCTCATTCCTCTTGCTGCCGTCACGCTCATCAG TTGTTAATTCCATTCCTCTTTGTGTCTCCCCTCCCCTAGTTTCTGCCGCCGATTTGCAGT CTCGCTCCCATTCTGTAGTTTGCAGCAGAGGATGATGCATGGTTCGGGTATTGACTTCTA TCTAATGGTGTGAAGCCTTCAATGATCATTAATTCTCTCCTTCTTTTTAGTAAGGGAAAT