Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d052124_T002
CDS Infomation	cds chromosome:B73_RefGen_v4:4:180352140:180355253:1 gene:Zm00001d052124 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative DUF231 domain containing family protein
Sequence	ATGAAGGGCGCGTGGAAGCAGAGCGGCGTGGTGGCCGTGGCCGATCAACTTGGCTACCTC GGCGGAGCAGGGTTCGTCGGGCGCGCGCGGCCCGTCACCCTCTGTCTCTACGGCCTCGCG CTCACCTTCGCCGGGTTCGCGGTGTTCCTCTGCTTCGCGCCCTCCCTCCCCGTGCCGCCA GCCTCGTCTCCGGGCGCGGCGTGGTTCGACGGCCTGATCGCCTCCGCGTCGCCGTACCGC GCGCAGGTCTCGGGCTTCCTCTCGTCCCTGTTCCCGGCCAACTCGTCCTCCACGGTGCCT CCTGGTGGTGGCGTCGCGGCCAGGCGTGCCGGGCCGAGCGGCGGCGGGTTCGCGGCGAGC GGTTCCCGAGGCAATGGCTCCACCTCCAGCGCGGTTCGGCCTGGCGAGCAGTTGGGAAGC GGAGGTGGAGTTCCGCCCAGCAGAGTGGGCAACGGCGAACCTCCCAGCGGCAAGGAAGCG CCAGTTCCTGGGGATGCTACTGCGGCGGTGCCTAGCGGCGCGCCGCCCGATGATCATGTG CAAGGCGAAGGCGGTGCCGGTGCCAAGCATTCCGTGGGGAGTGCCGCTGCCGAGGCGAAG GGTGGGTCTGGACCTGGTCCTGGACGCCCGAGCGGTGGTTCAGCCCAGAATGGCACATCG GCTAAAGGAAGAGTGCCTATTCTGATCAACGGCTCTTACGCGAACGCGAATTCCGCGGAT GCCGGAGATGGCAACGGAATGAGAGCGAGTGCAAGGAATGCTGCCGGCTCCACGCACCAA TTGAGAAGCGGAACTGCAGCTTTAGGCAATACCGTTGCTGTTTCATCCCTTAATCAGACT GCGAGTGCAGTTGCAGTAGCGGCCAGGGAAGGAAATGGAACTGCAACTGCAGGCAATAAC CAGACCTTCCTGATTCAGGCTCCTGCGGATAACAAGAACCACAGTTCAGTTGCTTCAGAT GGAAGCAATAGCAGTCCAACCAATAAGCAGAATGAATCGCCTGCTAGTCCTCAGGGGAGC ACTAGCACGGTGAAAGATCAATCTGCACGAGGGCCCACCCCAGCAGCCATTGTGCCGGTG AAAGCAGATGCTAATGCCGGTCGGCGCATGAAGGCTGATTGGACTGAGAACATGGCCGGC TGCGACTTGTTCTACGGGAATTGGGTTCGAGATGACTCGTACCCTCTGTATCCTGCGGGA TCATGCCCTCACATCGACGAGTCCTTCAACTGCCACCTCAACGGCCGGCCTGACAAAGCT TACGAGAGGCTCCGGTGGCAACCCAGCGGATGCAGAATCCCGAGGTTGAACCCAACTGAC ATGTTGGAGAGGCTGAGGGGGAAGAGGCTGGTGTTTGTCGGTGATTCGCTCAACAGGAAC ATGTGGGAATCCCTGATTTGTATATTGAGGAATTCTGTTAAAGACAAGAGTAAGGTTTTT GAGGTATCCGGTAGGAGCCAATTCAGGGCTGAGGGCTCCTACTCTTTCTTGTTCCAGGAC TACAACTGCAGTGTGGAGTTCTTCCGCTCCCCTTTCCTTGTTCAGGAATGGGAGATGCCA GTCAGCAATGGGAAGGGTACACGGGAAACTCTCAGGCTTGACATTATCGATCCCTCGTTT CCGAGGTACAAGAATGCAGATATCGTTATCTTCAATACTGGCCACTGGTGGACGCATGAC AAAACTTCTCTAGGGAAAGATTACTACCAGGAGGGCAACCGCGTATACAGTGAGCTGGAT GTTCATGACGCCTTTCGGAGAGCTCTCAACACCTGGGCTAAGTGGGTTGATTCCAATGTG AACCCCAAGAAAACCACTGTGTTTTTCAGAGGCTACTCTGCATCCCATTTCAGTGGGGGT CAATGGAATTCGGGCGGCAGTTGTGACAGGGAAACAGAGCCAATAACGGATGACCAGTAC CTCACGCCATACCCAACAAAGATGAGCATTTTGGAGGAGGTGCTCCGGGGGATGAAAACT CCCGTTGTGTACCTGAACATAACAAGGATGACTGACTACAGGAAGGAGGCCCACCCTTCA GTCTACCGCAAGCAGAAGTTGACCGAAGAGGAGAGGAAATCGCCTGAGCTATACCAGGAC TGCAGCCACTGGTGCCTTCCTGGAGTACCGGACTCCTGGAACGAACTTCTCTACGCACAG ATTTTGCTGACACAGCAGCATGGGATGCAACAATAA

Peptide Sequence

PEP ID	Zm00001d052124_P002
PEP Infomation	pep chromosome:B73_RefGen_v4:4:180352140:180355253:1 gene:Zm00001d052124 transcript:Zm00001d052124_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative DUF231 domain containing family protein
Sequence	MKGAWKQSGVVAVADQLGYLGGAGFVGRARPVTLCLYGLALTFAGFAVFLCFAPSLPVPP ASSPGAAWFDGLIASASPYRAQVSGFLSSLFPANSSSTVPPGGGVAARRAGPSGGGFAAS GSRGNGSTSSAVRPGEQLGSGGGVPPSRVGNGEPPSGKEAPVPGDATAAVPSGAPPDDHV QGEGGAGAKHSVGSAAAEAKGGSGPGPGRPSGGSAQNGTSAKGRVPILINGSYANANSAD AGDGNGMRASARNAAGSTHQLRSGTAALGNTVAVSSLNQTASAVAVAAREGNGTATAGNN QTFLIQAPADNKNHSSVASDGSNSSPTNKQNESPASPQGSTSTVKDQSARGPTPAAIVPV KADANAGRRMKADWTENMAGCDLFYGNWVRDDSYPLYPAGSCPHIDESFNCHLNGRPDKA YERLRWQPSGCRIPRLNPTDMLERLRGKRLVFVGDSLNRNMWESLICILRNSVKDKSKVF EVSGRSQFRAEGSYSFLFQDYNCSVEFFRSPFLVQEWEMPVSNGKGTRETLRLDIIDPSF PRYKNADIVIFNTGHWWTHDKTSLGKDYYQEGNRVYSELDVHDAFRRALNTWAKWVDSNV NPKKTTVFFRGYSASHFSGGQWNSGGSCDRETEPITDDQYLTPYPTKMSILEEVLRGMKT PVVYLNITRMTDYRKEAHPSVYRKQKLTEEERKSPELYQDCSHWCLPGVPDSWNELLYAQ ILLTQQHGMQQ

Transcript Sequence

Transcript ID	Zm00001d052124_T002
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:180352140:180355253:1 gene:Zm00001d052124 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative DUF231 domain containing family protein
Sequence	ACGGCGGTCTCGCCATCCTCGCTTCTGCCGTCTCCTCACACCGGCACCGCTTGCGCCTCC TCTAAGCCCTAACAAACTCCCGCAGCGCCCGCTCGCCCGCCTTCGCACGCCACCGGATGA AGGGCGCGTGGAAGCAGAGCGGCGTGGTGGCCGTGGCCGATCAACTTGGCTACCTCGGCG GAGCAGGGTTCGTCGGGCGCGCGCGGCCCGTCACCCTCTGTCTCTACGGCCTCGCGCTCA CCTTCGCCGGGTTCGCGGTGTTCCTCTGCTTCGCGCCCTCCCTCCCCGTGCCGCCAGCCT CGTCTCCGGGCGCGGCGTGGTTCGACGGCCTGATCGCCTCCGCGTCGCCGTACCGCGCGC AGGTCTCGGGCTTCCTCTCGTCCCTGTTCCCGGCCAACTCGTCCTCCACGGTGCCTCCTG GTGGTGGCGTCGCGGCCAGGCGTGCCGGGCCGAGCGGCGGCGGGTTCGCGGCGAGCGGTT CCCGAGGCAATGGCTCCACCTCCAGCGCGGTTCGGCCTGGCGAGCAGTTGGGAAGCGGAG GTGGAGTTCCGCCCAGCAGAGTGGGCAACGGCGAACCTCCCAGCGGCAAGGAAGCGCCAG TTCCTGGGGATGCTACTGCGGCGGTGCCTAGCGGCGCGCCGCCCGATGATCATGTGCAAG GCGAAGGCGGTGCCGGTGCCAAGCATTCCGTGGGGAGTGCCGCTGCCGAGGCGAAGGGTG GGTCTGGACCTGGTCCTGGACGCCCGAGCGGTGGTTCAGCCCAGAATGGCACATCGGCTA AAGGAAGAGTGCCTATTCTGATCAACGGCTCTTACGCGAACGCGAATTCCGCGGATGCCG GAGATGGCAACGGAATGAGAGCGAGTGCAAGGAATGCTGCCGGCTCCACGCACCAATTGA GAAGCGGAACTGCAGCTTTAGGCAATACCGTTGCTGTTTCATCCCTTAATCAGACTGCGA GTGCAGTTGCAGTAGCGGCCAGGGAAGGAAATGGAACTGCAACTGCAGGCAATAACCAGA CCTTCCTGATTCAGGCTCCTGCGGATAACAAGAACCACAGTTCAGTTGCTTCAGATGGAA GCAATAGCAGTCCAACCAATAAGCAGAATGAATCGCCTGCTAGTCCTCAGGGGAGCACTA GCACGGTGAAAGATCAATCTGCACGAGGGCCCACCCCAGCAGCCATTGTGCCGGTGAAAG CAGATGCTAATGCCGGTCGGCGCATGAAGGCTGATTGGACTGAGAACATGGCCGGCTGCG ACTTGTTCTACGGGAATTGGGTTCGAGATGACTCGTACCCTCTGTATCCTGCGGGATCAT GCCCTCACATCGACGAGTCCTTCAACTGCCACCTCAACGGCCGGCCTGACAAAGCTTACG AGAGGCTCCGGTGGCAACCCAGCGGATGCAGAATCCCGAGGTTGAACCCAACTGACATGT TGGAGAGGCTGAGGGGGAAGAGGCTGGTGTTTGTCGGTGATTCGCTCAACAGGAACATGT GGGAATCCCTGATTTGTATATTGAGGAATTCTGTTAAAGACAAGAGTAAGGTTTTTGAGG TATCCGGTAGGAGCCAATTCAGGGCTGAGGGCTCCTACTCTTTCTTGTTCCAGGACTACA ACTGCAGTGTGGAGTTCTTCCGCTCCCCTTTCCTTGTTCAGGAATGGGAGATGCCAGTCA GCAATGGGAAGGGTACACGGGAAACTCTCAGGCTTGACATTATCGATCCCTCGTTTCCGA GGTACAAGAATGCAGATATCGTTATCTTCAATACTGGCCACTGGTGGACGCATGACAAAA CTTCTCTAGGGAAAGATTACTACCAGGAGGGCAACCGCGTATACAGTGAGCTGGATGTTC ATGACGCCTTTCGGAGAGCTCTCAACACCTGGGCTAAGTGGGTTGATTCCAATGTGAACC CCAAGAAAACCACTGTGTTTTTCAGAGGCTACTCTGCATCCCATTTCAGTGGGGGTCAAT GGAATTCGGGCGGCAGTTGTGACAGGGAAACAGAGCCAATAACGGATGACCAGTACCTCA CGCCATACCCAACAAAGATGAGCATTTTGGAGGAGGTGCTCCGGGGGATGAAAACTCCCG TTGTGTACCTGAACATAACAAGGATGACTGACTACAGGAAGGAGGCCCACCCTTCAGTCT ACCGCAAGCAGAAGTTGACCGAAGAGGAGAGGAAATCGCCTGAGCTATACCAGGACTGCA GCCACTGGTGCCTTCCTGGAGTACCGGACTCCTGGAACGAACTTCTCTACGCACAGATTT TGCTGACACAGCAGCATGGGATGCAACAATAAAGGCAAGTGTGGACTTGTTCTTGTATAT GAAATGTTTTCAGACGTCAAGCTGCATAGGATACAAATCTACATGAATCGATCAAAGGGA AGCTTATAGTATAAGTGAGACCAAGGGTTTTGGAATCCATGCATAGAGTAAAGCAGGCAG TTAGCTCTGAATAACACGAAATCTGTATAGGCTCGATAGGATTATATGATGTAAACTTCA TGCCTAGTTAGAAGAAAAAATAATAAGAACAAAGAGAATAGAATAGATAGTGCACTAGAT GACATAGGACTATAGGAGGCCCTTGTTTTGTGAGACTTTTGTCTGCCTGTATTGTACTAA TATAGTATTCTGAATTCGTATTCGTATATACTTTC