Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d052123_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:4:180320647:180322171:-1 gene:Zm00001d052123 gene_biotype:protein_coding transcript_biotype:protein_coding description:Thioredoxin-like 5

Sequence

ATGGCGCTCCTCGCGCCGAGCCCGCGCGCGCTCCGCGTGCGGGAGACCGCGGCGGCGGCG
CTCCCGCACTCATCGGCGACCGCTGCATGCTCGACCGTCGGCGGCGGGGCGGCCAGGCGG
GCGCTGTGGCTGTGGGACAACGGCGGCGGGACCGGGACGGGGAGGAGGAAGGAGCACCGG
GAGAGAGTCCGGCCGGAGGCGTACTGCTGGGACGTGTCCAGGCCGGTGGAGATGGAGGAG
ATCGACAGCATCGAGAAGCTCGATGATGCGCTCAGGTGGTCCGTCGAGAACAACCAGCCC
GTCGTCATCGACTGGATGGCAGGTTGGTGTCGGAAATGCATCTACCTGATGCCCAGAATG
GAGAAGATGGCAGGAGAATATCCTGAAGTGAGGTTTTACTTCATCGATGTCAATAAAGTT
CCACAGGGGGTGGTGAAAAGAGGAAATGTAACTAGAATGCCCACTATTCAGCTATGGAAG
GATGGAGAGTGGAAAGCGGAAGTAATAGGAGGCCACAAAGCTTGTCTTGTGATGGATGAG
GTTAGAGAAATGATCGAGAATAACAAGTGA

Peptide Sequence

PEP ID

Zm00001d052123_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:4:180320647:180322171:-1 gene:Zm00001d052123 transcript:Zm00001d052123_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Thioredoxin-like 5

Sequence

MALLAPSPRALRVRETAAAALPHSSATAACSTVGGGAARRALWLWDNGGGTGTGRRKEHR
ERVRPEAYCWDVSRPVEMEEIDSIEKLDDALRWSVENNQPVVIDWMAGWCRKCIYLMPRM
EKMAGEYPEVRFYFIDVNKVPQGVVKRGNVTRMPTIQLWKDGEWKAEVIGGHKACLVMDE
VREMIENNK

Transcript Sequence

Transcript ID

Zm00001d052123_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:4:180320647:180322171:-1 gene:Zm00001d052123 gene_biotype:protein_coding transcript_biotype:protein_coding description:Thioredoxin-like 5

Sequence

GGATAAGCCACCTGCTTCCGATCGCACAGCCCTATCAACTCTCCTCGCCTGCCGTCGCCG
CCTCGCGCTCTCCGATCCCGCGCATATTCTCCACCAGTAGTCCTCTGCTCCGCCACACCC
ACCACTGCTAGGGCGCCGCGCCGCAGGCCCGCAGCCCCCTAATCTCCGAGTGCTGATCAC
GCGGAAACCGATGGCGCTCCTCGCGCCGAGCCCGCGCGCGCTCCGCGTGCGGGAGACCGC
GGCGGCGGCGCTCCCGCACTCATCGGCGACCGCTGCATGCTCGACCGTCGGCGGCGGGGC
GGCCAGGCGGGCGCTGTGGCTGTGGGACAACGGCGGCGGGACCGGGACGGGGAGGAGGAA
GGAGCACCGGGAGAGAGTCCGGCCGGAGGCGTACTGCTGGGACGTGTCCAGGCCGGTGGA
GATGGAGGAGATCGACAGCATCGAGAAGCTCGATGATGCGCTCAGGTGGTCCGTCGAGAA
CAACCAGCCCGTCGTCATCGACTGGATGGCAGGTTGGTGTCGGAAATGCATCTACCTGAT
GCCCAGAATGGAGAAGATGGCAGGAGAATATCCTGAAGTGAGGTTTTACTTCATCGATGT
CAATAAAGTTCCACAGGGGGTGGTGAAAAGAGGAAATGTAACTAGAATGCCCACTATTCA
GCTATGGAAGGATGGAGAGTGGAAAGCGGAAGTAATAGGAGGCCACAAAGCTTGTCTTGT
GATGGATGAGGTTAGAGAAATGATCGAGAATAACAAGTGACTAAACACCCAAGTTATGCA
ATAGATGTTGTACTGTGTTTGATGTAAGTATAGACATCAGACGATCTCTTCATATACTAA
GCTGAAATCAAATCACGTTTTAGTTTTGTACTAAGCCAAACTTGCTGATTTGAACCAAGC
TTACTGAAAAATGCATTAACATCTACGATATCAAACAAATCTCAAAATACA