Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d052113_T002
CDS Infomation	cds chromosome:B73_RefGen_v4:4:180167725:180171484:1 gene:Zm00001d052113 gene_biotype:protein_coding transcript_biotype:protein_coding description:Replication protein A 70 kDa DNA-binding subunit A
Sequence	ATGGCGGCGGCGAAGCTGACAGGCAACGCCGTGGCGGCGGCGATGGCGGGGGACACCAAC CTCAAGCCGGTGGTGCAGGTCGTCGACCTCCGGAGCATCGCGGTCACCGGGGCCCCGGGC TCCGGGCCCAGGTTCCGCGCCATCATCTCCGATGGCGTCGCCACGGGGCACGCGCTCTTC GCCTCGCAGCTCTGCGACCTCGCGCGCTCCGGCGTCGTCCGCCGCGGCTCGGTCGTGCAG CTCCTCGACTACATCGTTAACAACGTCGGCCCCACCCGGAACAGAAAGGCAATTGTTATT CTGAACATGGAGGTTCTTGTTGCAGAGTGTGAGATTATTGGAAATCCAGCACTACCTCCT GAATCTGGAGATTCTAGTTCAAATTCCCTGAGAGCAGACCAGTTTAATGGAGCACCTCCA AATGGTTCAATGGCAGGGAGTACTTTGAACAAAGTGATAAAGCCCTCTGACAATGCTCCA GTAATCCAGAGATCGATGACAGGTAACTCTTTGAACATGGTTCCTAGGCCAAGTGACAAT GCACAGGTCTTCCAACCAACCGTACAGCCATCCTATCGTCCTGCACCCAAATACAGAAGC CATGGCACAATCATGAAAAACGATGCTCCTGCTAGAATAATCCCCATACCTGCTCTAAAT CCTTATCAGGGCCGCTGGGCTATCAAGGCTCGAGTAACTGCCAAAGGAGAGATCCGCCGG TACCATAATGCAAAAGGTGATGGCAAAGTGTTCTCTTTTGACCTGCTTGATACTGATGGT GGTGAGATTCGGGCTACATGTTTCAATGCTCTTGTTGATCGCTTCTATGAAGTTGTGGAA GTTGGTAAGGTCTATGTGGTATCTAGAGGAAACTTGAAACCCGCAAAGAAGGACTACAAC CATCTGAATAATGAGTGGGAGATTTTCTTGGAACCTCAGTCAACTATTGAACTTTGTCTT GATGAGAACAGCTCTATTCCTGCCCAGCGGTTTAGCTTCTCATCGATTGATAAAATTGAA AATTCAGAGAACAATGCAATTGTTGATGTCATTGGTGTTGTTACATCTGTCAACCCTAGT ACTACAATACAGAGGAAAAATGGTATGGAAGCTCAGAAAAGGACCATCACCCTGAATGAT ATGTCTGGTCGAAGTGTTGAGCTTACCATGTGGGGTGACTTCTGCAACAGAGAAGGCTCG CAGCTGCAAGAAATGGTTGAATGTGGGGCGTTTCCTGTGCTCGCTGTCAAAGCTGGAAAA GTCAATGATTACAGTGGGAAGTCTGTTGGCACAATTTCTTCATCTCAACTCCACATAAAC CCTGATCTTGCTGAGGCTCATTCTCTCAGGCAGTGGTTTGATTGTGGAGGAAGAGATGCT TCTACTCAGTCTATATCCAGGGATTTTACTCCTTCAGCATCATGGAATGAGGTCCGAAAG ACAGTAGCACAGATAAAGGATGATGGTCTTGGAATGGGGGACAAACCCGATTGGGTCACG GTGAAGGCTGCTATTTCGTTCATCAAAACCGATTCCTTCTGCTACACAGCTTGCCCCAAT GTGATTGGAGACAGGCAATGTGGTAAAAAGGTGACAAAGTCTGATTCAGGCAACTGGCTA TGTGACAAGTGCAATCAAGAGTTTCCAGAGTGTGATTACAGGTATCTCCTACAGTTGAAC ATTCAAGACCACACGGGAACAACTTCTGTGACAGCATTTCAAGATCGTGGACAGGAGATA CTTGGTTGCTCAGCTCGAGAGCTCAACATTTTTAAAGAGAACAAAGATCCTCGCTACACA GATGTCTTGATCAATTGCTTGTATCAGAACTATTTGTTCAGGCTAAAAGTGAAAGAAGAA CAATATGGCGATGTACGACAAGTGAAAAACACTGTGGCCAAGGTGGAGAGGGTGGATCCT TTGGCTGAGAGTAAATTTCTGCTTGATTCCATTTCAAGGTTTATACCATGA

Peptide Sequence

PEP ID	Zm00001d052113_P002
PEP Infomation	pep chromosome:B73_RefGen_v4:4:180167725:180171484:1 gene:Zm00001d052113 transcript:Zm00001d052113_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Replication protein A 70 kDa DNA-binding subunit A
Sequence	MAAAKLTGNAVAAAMAGDTNLKPVVQVVDLRSIAVTGAPGSGPRFRAIISDGVATGHALF ASQLCDLARSGVVRRGSVVQLLDYIVNNVGPTRNRKAIVILNMEVLVAECEIIGNPALPP ESGDSSSNSLRADQFNGAPPNGSMAGSTLNKVIKPSDNAPVIQRSMTGNSLNMVPRPSDN AQVFQPTVQPSYRPAPKYRSHGTIMKNDAPARIIPIPALNPYQGRWAIKARVTAKGEIRR YHNAKGDGKVFSFDLLDTDGGEIRATCFNALVDRFYEVVEVGKVYVVSRGNLKPAKKDYN HLNNEWEIFLEPQSTIELCLDENSSIPAQRFSFSSIDKIENSENNAIVDVIGVVTSVNPS TTIQRKNGMEAQKRTITLNDMSGRSVELTMWGDFCNREGSQLQEMVECGAFPVLAVKAGK VNDYSGKSVGTISSSQLHINPDLAEAHSLRQWFDCGGRDASTQSISRDFTPSASWNEVRK TVAQIKDDGLGMGDKPDWVTVKAAISFIKTDSFCYTACPNVIGDRQCGKKVTKSDSGNWL CDKCNQEFPECDYRYLLQLNIQDHTGTTSVTAFQDRGQEILGCSARELNIFKENKDPRYT DVLINCLYQNYLFRLKVKEEQYGDVRQVKNTVAKVERVDPLAESKFLLDSISRFIP

Transcript Sequence

Transcript ID	Zm00001d052113_T002
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:180167725:180171484:1 gene:Zm00001d052113 gene_biotype:protein_coding transcript_biotype:protein_coding description:Replication protein A 70 kDa DNA-binding subunit A
Sequence	ATCGAACCGCCTCTCCCCGAGTCCCGTACCGTACTCTTGCGGTCTTGCCGCTCCAACATT TCAGCCCCCACCCCTCATCAATTTTTCCTCATCCGCCTTCGTCCCGCACGCTTGCCGTCC AACCGCTCCCACAGGTCGAGGCGGGGAGGGGGAGGAGGAGGAGTTGCTGGTGGGTGTGGA TTCGCCGTCGATTCGAGTCTGCGATGGCGGCGGCGAAGCTGACAGGCAACGCCGTGGCGG CGGCGATGGCGGGGGACACCAACCTCAAGCCGGTGGTGCAGGTCGTCGACCTCCGGAGCA TCGCGGTCACCGGGGCCCCGGGCTCCGGGCCCAGGTTCCGCGCCATCATCTCCGATGGCG TCGCCACGGGGCACGCGCTCTTCGCCTCGCAGCTCTGCGACCTCGCGCGCTCCGGCGTCG TCCGCCGCGGCTCGGTCGTGCAGCTCCTCGACTACATCGTTAACAACGTCGGCCCCACCC GGAACAGAAAGGCAATTGTTATTCTGAACATGGAGGTTCTTGTTGCAGAGTGTGAGATTA TTGGAAATCCAGCACTACCTCCTGAATCTGGAGATTCTAGTTCAAATTCCCTGAGAGCAG ACCAGTTTAATGGAGCACCTCCAAATGGTTCAATGGCAGGGAGTACTTTGAACAAAGTGA TAAAGCCCTCTGACAATGCTCCAGTAATCCAGAGATCGATGACAGGTAACTCTTTGAACA TGGTTCCTAGGCCAAGTGACAATGCACAGGTCTTCCAACCAACCGTACAGCCATCCTATC GTCCTGCACCCAAATACAGAAGCCATGGCACAATCATGAAAAACGATGCTCCTGCTAGAA TAATCCCCATACCTGCTCTAAATCCTTATCAGGGCCGCTGGGCTATCAAGGCTCGAGTAA CTGCCAAAGGAGAGATCCGCCGGTACCATAATGCAAAAGGTGATGGCAAAGTGTTCTCTT TTGACCTGCTTGATACTGATGGTGGTGAGATTCGGGCTACATGTTTCAATGCTCTTGTTG ATCGCTTCTATGAAGTTGTGGAAGTTGGTAAGGTCTATGTGGTATCTAGAGGAAACTTGA AACCCGCAAAGAAGGACTACAACCATCTGAATAATGAGTGGGAGATTTTCTTGGAACCTC AGTCAACTATTGAACTTTGTCTTGATGAGAACAGCTCTATTCCTGCCCAGCGGTTTAGCT TCTCATCGATTGATAAAATTGAAAATTCAGAGAACAATGCAATTGTTGATGTCATTGGTG TTGTTACATCTGTCAACCCTAGTACTACAATACAGAGGAAAAATGGTATGGAAGCTCAGA AAAGGACCATCACCCTGAATGATATGTCTGGTCGAAGTGTTGAGCTTACCATGTGGGGTG ACTTCTGCAACAGAGAAGGCTCGCAGCTGCAAGAAATGGTTGAATGTGGGGCGTTTCCTG TGCTCGCTGTCAAAGCTGGAAAAGTCAATGATTACAGTGGGAAGTCTGTTGGCACAATTT CTTCATCTCAACTCCACATAAACCCTGATCTTGCTGAGGCTCATTCTCTCAGGCAGTGGT TTGATTGTGGAGGAAGAGATGCTTCTACTCAGTCTATATCCAGGGATTTTACTCCTTCAG CATCATGGAATGAGGTCCGAAAGACAGTAGCACAGATAAAGGATGATGGTCTTGGAATGG GGGACAAACCCGATTGGGTCACGGTGAAGGCTGCTATTTCGTTCATCAAAACCGATTCCT TCTGCTACACAGCTTGCCCCAATGTGATTGGAGACAGGCAATGTGGTAAAAAGGTGACAA AGTCTGATTCAGGCAACTGGCTATGTGACAAGTGCAATCAAGAGTTTCCAGAGTGTGATT ACAGGTATCTCCTACAGTTGAACATTCAAGACCACACGGGAACAACTTCTGTGACAGCAT TTCAAGATCGTGGACAGGAGATACTTGGTTGCTCAGCTCGAGAGCTCAACATTTTTAAAG AGAACAAAGATCCTCGCTACACAGATGTCTTGATCAATTGCTTGTATCAGAACTATTTGT TCAGGCTAAAAGTGAAAGAAGAACAATATGGCGATGTACGACAAGTGAAAAACACTGTGG CCAAGGTGGAGAGGGTGGATCCTTTGGCTGAGAGTAAATTTCTGCTTGATTCCATTTCAA GGTTTATACCATGAGAGTTTTGTTCTTACATCTATCAGCTGCTGGTAAGTGTGCTGCCCG CTTAGAAGTGGTAATTAATATGTAGCTTTCCCTATTCACACGCCCGGAGGTTTCTTTGTC GGATAGAATTCTATCATTCAGCAGTAGAGTTTTCTCCACTTTTGGTCTGCCAGATACCTG CAGCTTGAAGCTATGTGTTCTTTCATAATTAACTGAACGCTTGTAAGTGTGATTATGAGA GTTCTGTTTAGCTCAGCTACTTTGTGGTTACTACTATTTTGGTTTAGTTTGGTATAGTCG GACATTCCTACTGCTC