Gene sequences

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SNP Detection
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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d052111_T032
CDS Infomation	cds chromosome:B73_RefGen_v4:4:180073294:180084277:1 gene:Zm00001d052111 gene_biotype:protein_coding transcript_biotype:protein_coding description:DENN (AEX-3) domain-containing protein
Sequence	ATGCTCATGAATGAAAAACCCGTCTTTCCACGCCGGAGTCGATATGTGATAACTACGCCC CGGTGTTATTGCATCCTATCCAGGCTTCCATTCTTTGAACTACATTTTGGGGTGTTGCAG AGTATTCTTATGGAAGAACGTCTTGAATGGCTCACAGATGGTGTTAGCATGCTAACTTCC TTATCGCTTGAGGAATCCTGTGAGAACGATATCTGTGAAGGAACTGCAGTTACAGCACAG AAACATTATTTAGATAGCAACACAACTGATGTGGATAAATCATCTGAATCTAGCAATGGA GTTTCGTCAACGGAGCTGTCTGATACTGACAGCAGTTCTGGGTGTAGAGAAAACCAGCTT GACTTTGTTTCTAAAGAACAACAGCAAAATAGTTCTTGTGAAGAACAGAGTAATTTTAAA AGAGAAATAGTCACTTGTTCTGATGCTTCCGAAGTGTCTGATCATTTTGTTCCAGAAGAT ACATCATCTGATCAGTCTGGAGTTAAGCACCATGAACTTCATTCTGCACCAAGTATCCCG GATGAATCTGGTGCAAGGAACTGTGATGATTCCCCGAAGGAAAATGTGGATGATGAGGAG CTTGATCTCTTCATTATAGATACTATTTTACCACTTATGCGATCTCGCCTTTGTGAAGAT TGTGAATCATCTCCAAGTTCACAGGGTTCTCCTTCTGAAGGCAGAAATTTTGACACCCAA GAATCGGATTCAGAGGAGCCATCTTCCATTGGTGATGGAGACTTAGTTAAACACAACAAC ATACTGCAGTGGGCTAAGGCAAAAAAATATGGTTCTTTGCAAGTTGTCTGTCAATACTAC CAGTTACAGTGTCCTGCTAGGGGTTCAACACTTGCTTTTCATCCCTTGGAGCATTTGCAT TCTTTGAGTTTTCACCGGCCTGGTGAAACAGTTCTTCACATTGCTGGTTCTACTATTGAG CTTAGGTCACGTGATACAAGCTTAGAGGTTGCTGAGATGCGCAATGCACTCTTTGCTGAG GAGGAATCGACTGCTTTGTCCACATGGGCAGTGGCATCCATTTGTGGATGCCTCAGGTTG GAACATGTAATGACACTTTTTGCTGCCGCACTCCTGGAGAAACAGATTGTTATTGTCTGT TCTAATCTGGGAATGTTATCGGCTTCAGTTTTGTCCATCTTACCTCTAATACGACCGTAT CAGTGGCAGAGTCTCCTCATGACGGTTTTGCCTAATGACATGATGGATTTTCTGGATGCC CCAGTTCCATACATAGTGGGCGTACAAAACAAGACATCTGATGTGCTCAACCGGCTAACA AATGCCGTAGTCATTGATGCCAACAGGAATCAGATTAAGTCCTCTTCAGTCCCACAACTA CCACAGCACAGAGAGTTGCTTTCTGCCTTGCGCCCGTATCATTCAATACTTGTTGGCGAA AGTTATCTTGCAAGAAAACGCCCTGTTTATGAATGCACAGATGCCCAGGTGGAAGGGGCT AAAGGTTTCTTGGCAGTGCTTAGAGACTACCTTGACACACTATGCTCGAACTTGAGATCT CATACAATTACCAATGTGCAATCTAACAATGACAAGGTTTCCTTACTTTTAAAAGAGAGC TTTATTGGTTCTTTCCCAAGCCGGGATAGGCCTTTTATGAAGCTTTTTGTGGACACCCAG TTGTTCTCAGTACATACAGACCTAGTTCTCTCTTTTTATCAGAAGGACTAA

Peptide Sequence

PEP ID	Zm00001d052111_P032
PEP Infomation	pep chromosome:B73_RefGen_v4:4:180073294:180084277:1 gene:Zm00001d052111 transcript:Zm00001d052111_T032 gene_biotype:protein_coding transcript_biotype:protein_coding description:DENN (AEX-3) domain-containing protein
Sequence	MLMNEKPVFPRRSRYVITTPRCYCILSRLPFFELHFGVLQSILMEERLEWLTDGVSMLTS LSLEESCENDICEGTAVTAQKHYLDSNTTDVDKSSESSNGVSSTELSDTDSSSGCRENQL DFVSKEQQQNSSCEEQSNFKREIVTCSDASEVSDHFVPEDTSSDQSGVKHHELHSAPSIP DESGARNCDDSPKENVDDEELDLFIIDTILPLMRSRLCEDCESSPSSQGSPSEGRNFDTQ ESDSEEPSSIGDGDLVKHNNILQWAKAKKYGSLQVVCQYYQLQCPARGSTLAFHPLEHLH SLSFHRPGETVLHIAGSTIELRSRDTSLEVAEMRNALFAEEESTALSTWAVASICGCLRL EHVMTLFAAALLEKQIVIVCSNLGMLSASVLSILPLIRPYQWQSLLMTVLPNDMMDFLDA PVPYIVGVQNKTSDVLNRLTNAVVIDANRNQIKSSSVPQLPQHRELLSALRPYHSILVGE SYLARKRPVYECTDAQVEGAKGFLAVLRDYLDTLCSNLRSHTITNVQSNNDKVSLLLKES FIGSFPSRDRPFMKLFVDTQLFSVHTDLVLSFYQKD

Transcript Sequence

Transcript ID	Zm00001d052111_T032
Transcript Infomation	cdna chromosome:B73_RefGen_v4:4:180073294:180084277:1 gene:Zm00001d052111 gene_biotype:protein_coding transcript_biotype:protein_coding description:DENN (AEX-3) domain-containing protein
Sequence	AGGTTCTTTTTGCATACCCTCCAGAGAAGCCTCTTCCACTCAAGTACAAGGATACCCTCT CTTTCTGCCTTCCCGGAGGTGTACAGGTTCATGCTGTCGAACGTACTCCTTCGTTCAGTG AGCTGAATGAAATTCTCCTGGGACAGGAACAGCTTAAAGAAAGCAACCAATCATTTGTGT TCCGCCTACAGGTGGCTGATAACTCTGCATTATATGGATGCTGTGTGCTTGTTGAAGAGA TCGTACAGAGACCATCAAAGTTGGTATCGATGCTCATGAATGAAAAACCCGTCTTTCCAC GCCGGAGTCGATATGTGATAACTACGCCCCGGTGTTATTGCATCCTATCCAGGCTTCCAT TCTTTGAACTACATTTTGGGGTGTTGCAGAGTATTCTTATGGAAGAACGTCTTGAATGGC TCACAGATGGTGTTAGCATGCTAACTTCCTTATCGCTTGAGGAATCCTGTGAGAACGATA TCTGTGAAGGAACTGCAGTTACAGCACAGAAACATTATTTAGATAGCAACACAACTGATG TGGATAAATCATCTGAATCTAGCAATGGAGTTTCGTCAACGGAGCTGTCTGATACTGACA GCAGTTCTGGGTGTAGAGAAAACCAGCTTGACTTTGTTTCTAAAGAACAACAGCAAAATA GTTCTTGTGAAGAACAGAGTAATTTTAAAAGAGAAATAGTCACTTGTTCTGATGCTTCCG AAGTGTCTGATCATTTTGTTCCAGAAGATACATCATCTGATCAGTCTGGAGTTAAGCACC ATGAACTTCATTCTGCACCAAGTATCCCGGATGAATCTGGTGCAAGGAACTGTGATGATT CCCCGAAGGAAAATGTGGATGATGAGGAGCTTGATCTCTTCATTATAGATACTATTTTAC CACTTATGCGATCTCGCCTTTGTGAAGATTGTGAATCATCTCCAAGTTCACAGGGTTCTC CTTCTGAAGGCAGAAATTTTGACACCCAAGAATCGGATTCAGAGGAGCCATCTTCCATTG GTGATGGAGACTTAGTTAAACACAACAACATACTGCAGTGGGCTAAGGCAAAAAAATATG GTTCTTTGCAAGTTGTCTGTCAATACTACCAGTTACAGTGTCCTGCTAGGGGTTCAACAC TTGCTTTTCATCCCTTGGAGCATTTGCATTCTTTGAGTTTTCACCGGCCTGGTGAAACAG TTCTTCACATTGCTGGTTCTACTATTGAGCTTAGGTCACGTGATACAAGCTTAGAGGTTG CTGAGATGCGCAATGCACTCTTTGCTGAGGAGGAATCGACTGCTTTGTCCACATGGGCAG TGGCATCCATTTGTGGATGCCTCAGGTTGGAACATGTAATGACACTTTTTGCTGCCGCAC TCCTGGAGAAACAGATTGTTATTGTCTGTTCTAATCTGGGAATGTTATCGGCTTCAGTTT TGTCCATCTTACCTCTAATACGACCGTATCAGTGGCAGAGTCTCCTCATGACGGTTTTGC CTAATGACATGATGGATTTTCTGGATGCCCCAGTTCCATACATAGTGGGCGTACAAAACA AGACATCTGATGTGCTCAACCGGCTAACAAATGCCGTAGTCATTGATGCCAACAGGAATC AGATTAAGTCCTCTTCAGTCCCACAACTACCACAGCACAGAGAGTTGCTTTCTGCCTTGC GCCCGTATCATTCAATACTTGTTGGCGAAAGTTATCTTGCAAGAAAACGCCCTGTTTATG AATGCACAGATGCCCAGGTGGAAGGGGCTAAAGGTTTCTTGGCAGTGCTTAGAGACTACC TTGACACACTATGCTCGAACTTGAGATCTCATACAATTACCAATGTGCAATCTAACAATG ACAAGGTTTCCTTACTTTTAAAAGAGAGCTTTATTGGTTCTTTCCCAAGCCGGGATAGGC CTTTTATGAAGCTTTTTGTGGACACCCAGTTGTTCTCAGTACATACAGACCTAGTTCTCT CTTTTTATCAGAAGGACTAAGTGTCTGGCAGACTTGAATGTCTGCCTCGTCTTGCCAAGC CTTTAGATGTTGAGCTAAACTGTACATATCGGCAGCTCAGTGTTTGTGCAAAGAGCTCGA AGGAGAAGCCATATACCGTCAGAAAAAAGTGGTAGATTGCCAGGATCCAGTTATGGGTAT TGAAGAAGAATGCTTGTAGCTGCTTAAGTTAGTCTGGTGCGGTAATCCAAGGTTTTGTTG GCTGTAGTTGGTGCCCCCATAAGAAGCCTTGTATGGATTGTTCCTGCAAATGCCTGTGCT GTAACGGAACCGTGTCTGTGGCAAAATCTCCGAACATGAATGCGTCCATTTGGCAAATCT AAGCGTGCAATGGGACATCG